iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Tru-117591

UUCD1 version

UUC-TaR-00549

Ensembl Protein ID

ENSTRUP00000026441.1

UniProt Accession

H2TP35; H2TP35_TAKRU

Protein Name

Uncharacterized protein

Gene Name

wdr47a (1 of many); LOC101066289

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSTRUG00000010485.1	ENSTRUT00000026548.1	ENSTRUP00000026441.1
ENSTRUG00000010485.1	ENSTRUT00000026549.1	ENSTRUP00000026442.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.60e-26	92.4	725	762
UBD/Beta-Prp	2.80e-41	142.9	628	888

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtcl.afsd.tllvsGsdDgtikvWDlrtgvllk 37
           gHt+ +  +  + + ++++sGs D+t++ WDlr   +++
   Q: 725  GHTGHILTVfTW-GgWMIASGSQDKTVRFWDLRVPSCVR 762
           788888886357.44*****************9888875 PP

UBD/Beta-Prp

   S: 6    kghhksvitcvkfspdksllatgsrdgtikvwdvttgkl......lrslsgheaevtavkfspdgk....ilvtgse.Drtikvwdlst 83
           ++hhk+ i+cv++sp ++llatgs d+ +kv  ++  ++        ++s h+++++++ f +  +    il++++  D +i+  d + 
   Q: 628  NKHHKGSIYCVAWSPCGQLLATGSNDKFVKVLPFSADTCnategpDLEFSMHDGTIRDLAFMEGPEsggsILISAGAgDCNIYTTDCQR 716
           68**********************************9999999998899************887666677888765516788888**** PP
   S: 84   gkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqclee...tlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktg 169
           g+ +h+l+gh+  +l++     g  ++sGs+d+t+r wdl+  +c++     l g  ++v +v+v+p+g+ll++G  D+t++l+d+k g
   Q: 717  GQGLHALSGHTGHILTVFTWG-GWMIASGSQDKTVRFWDLRVPSCVRVvgtSLHGSGSAVASVAVDPSGRLLATGQEDSTCMLYDIKGG 804
           ****************98888.9***********************999999************************************* PP
   S: 170  kllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlq...tgecvrtlng.htdnvksvrfspnderlvsgssDgsiriWd 250
           ++++t +  h ++++s+ f++   +l++gs+d+++ + dlq   t+   +t+ g h d v + r +p+d+ ++s s+D+++ +W 
   Q: 805  RIVQTYRP-HGSDIRSVRFSPGAHHLLTGSYDNKIVVSDLQgdlTKPLPQTVAGeHWDKVIQCRWHPHDQTFLSSSADRTVVLWG 888
           *******9.********************************9997777777777699***************************6 PP

Organism

Takifugu rubripes

Protein Sequence
(Fasta)

MTPEETISVK EAEVIKVVLD FLNSRKLHIS MLALEKESGI INGLYSDDML FLRQLILDGE 60
WEEVMQFIQP LEGMEKFEKK RFHFIIMKQK FLEALCVNNA MSAAEDPQNL ELSMQEAVKC 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGACGCCCG AGGAGACGAT CAGCGTCAAG GAGGCCGAGG TGATCAAGGT GGTGCTGGAC 60
TTCCTGAACT CCAGGAAGCT GCACATCAGC ATGCTGGCCC TGGAGAAGGA GAGCGGCATC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR024977--Apc4_WD40_dom
IPR006595--CTLH_C
IPR006594--LisH
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50897--CTLH
PS50896--LISH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12894--ANAPC4_WD40
PF00400--WD40

SMART

SM00668--CTLH
SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ame-010725	Astyanax mexicanus	70.91	0.00e+00	1118.00
IUUC-Cel-018667	Caenorhabditis elegans	49.26	6.00e-97	348.00
IUUC-Gac-041429	Gasterosteus aculeatus	82.94	0.00e+00	1415.00
IUUC-Ont-072376	Oreochromis niloticus	81.33	0.00e+00	1371.00
IUUC-Ola-087341	Oryzias latipes	79.09	0.00e+00	1324.00
IUUC-Pfo-096439	Poecilia formosa	82.13	0.00e+00	1394.00
IUUC-Tni-120018	Tetraodon nigroviridis	86.01	0.00e+00	1514.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence