iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Mdo-062290

UUCD1 version

UUC-MoD-00883

Ensembl Protein ID

ENSMODP00000019492.2

UniProt Accession

F6YFR5; F6YFR5_MONDO

Protein Name

Uncharacterized protein

Gene Name

IFT172

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSMODG00000015617.2	ENSMODT00000019841.2	ENSMODP00000019492.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.70e-06	26.7	18	44

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 5    svtclaf..sdtllvsGsdDgtikvWD 29
           +vtc+a+  ++  +++++ D ++ ++D
   Q: 18   KVTCMAWsqNNAKFAVCTVDRVVLLYD 44
           79*****9655779************9 PP

Organism

Monodelphis domestica

Protein Sequence
(Fasta)

MQLKHLRTLL SPQDGAAKVT CMAWSQNNAK FAVCTVDRVV LLYDEHGERR DKFSTKPADM 60
KYGRKSYVVK GMAFSPDSTK IAIGQTDNII YVYKIGEDWG DKKVICNKFI QTSAVTCLQW 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCAGTTGA AGCACTTGAG GACCCTGCTG AGCCCTCAGG TGAGCCGCCA GGGGTCCCTC 60
CGCCTCCCGC CGCCCCCTCT GATGTTACTC TAGGCTCGGT TGCCAGTGGG GACGGCGCGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR016024--ARM-type_fold
IPR011990--TPR-like_helical_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005930--C:axoneme
GO:0036064--C:ciliary basal body
GO:1903561--C:extracellular vesicle
GO:0030992--C:intraciliary transport particle B
GO:0097598--C:sperm cytoplasmic droplet
GO:0097225--C:sperm midpiece
GO:0097228--C:sperm principal piece
GO:0060348--P:bone development
GO:0007420--P:brain development
GO:0060271--P:cilium assembly
GO:0031122--P:cytoplasmic microtubule organization
GO:0009953--P:dorsal/ventral pattern formation
GO:0008544--P:epidermis development
GO:0001947--P:heart looping
GO:0061525--P:hindgut development
GO:0070986--P:left/right axis specification
GO:0060173--P:limb development
GO:0050680--P:negative regulation of epithelial cell proliferation
GO:0001843--P:neural tube closure
GO:1905515--P:non-motile cilium assembly
GO:0007219--P:Notch signaling pathway
GO:0060021--P:palate development
GO:0045880--P:positive regulation of smoothened signaling pathway
GO:0016485--P:protein processing
GO:0007224--P:smoothened signaling pathway
GO:0021522--P:spinal cord motor neuron differentiation

KEGG

mdo:100026266

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001775	Ailuropoda melanoleuca	96.63	0.00e+00	3370.00
IUUC-Apl-004180	Anas platyrhynchos	80.95	0.00e+00	2987.00
IUUC-Bta-012784	Bos taurus	96.58	0.00e+00	3346.00
IUUC-Cfa-020359	Canis familiaris	95.89	0.00e+00	3385.00
IUUC-Cre-022796	Chlamydomonas reinhardtii	24.46	4.00e-09	57.80
IUUC-Cho-024397	Choloepus hoffmanni	85.79	0.00e+00	1001.00
IUUC-Cin-025243	Ciona intestinalis	74.56	0.00e+00	794.00
IUUC-Csv-025964	Ciona savignyi	66.67	0.00e+00	1613.00
IUUC-Dno-029782	Dasypus novemcinctus	95.33	0.00e+00	2273.00
IUUC-Eca-033288	Equus caballus	96.98	0.00e+00	3401.00
IUUC-Fca-036387	Felis catus	96.12	0.00e+00	3415.00
IUUC-Hsa-046333	Homo sapiens	94.70	0.00e+00	1026.00
IUUC-Loc-052126	Lepisosteus oculatus	75.88	0.00e+00	2847.00
IUUC-Laf-054242	Loxodonta africana	96.75	0.00e+00	3400.00
IUUC-Mcc-055460	Macaca mulatta	90.27	0.00e+00	3199.00
IUUC-Meu-056864	Macropus eugenii	98.06	0.00e+00	3380.00
IUUC-Mmr-060951	Microcebus murinus	92.81	0.00e+00	3226.00
IUUC-Mlu-067149	Myotis lucifugus	94.75	0.00e+00	3381.00
IUUC-Nle-069497	Nomascus leucogenys	89.68	0.00e+00	3227.00
IUUC-Opr-070642	Ochotona princeps	95.30	0.00e+00	3349.00
IUUC-Ocu-074484	Oryctolagus cuniculus	95.49	0.00e+00	3397.00
IUUC-Ola-086935	Oryzias latipes	65.49	0.00e+00	2358.00
IUUC-Ptr-090769	Pan troglodytes	93.78	0.00e+00	3384.00
IUUC-Psi-093021	Pelodiscus sinensis	91.43	0.00e+00	986.00
IUUC-Pma-094497	Petromyzon marinus	23.53	5.00e-06	47.40
IUUC-Pva-102604	Pteropus vampyrus	94.64	0.00e+00	3298.00
IUUC-Rno-104875	Rattus norvegicus	91.16	0.00e+00	945.00
IUUC-Tgu-116577	Taeniopygia guttata	86.64	0.00e+00	962.00
IUUC-Tru-117611	Takifugu rubripes	69.02	0.00e+00	2586.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence