iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ocu-074484

Ensembl Protein ID

ENSOCUP00000003749.2

UniProt Accession

G1SLK9; G1SLK9_RABIT

Genbank Protein ID

ENSOCUP00000003749

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AAGW02005699

Gene Name

IFT172

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSOCUG00000004327.2	ENSOCUT00000004338.2	ENSOCUP00000003749.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.70e-06	27.1	18	44

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 5    svtclaf..sdtllvsGsdDgtikvWD 29
           +vtc+a+  ++  +++++ D ++ ++D
   Q: 18   KVTCMAWsqNNAKFAVCTVDRVVLLYD 44
           79*****9655779************9 PP

Organism

Oryctolagus cuniculus

Protein Sequence
(Fasta)

MQLKHLRTLL SPQDGAAKVT CMAWSQNNAK FAVCTVDRVV LLYDEHGERR DKFSTKPADM 60
KYGRKSYMVK GMAFSPDSTK IAIGQTDNII YVYKIGEDWG DKKVICNKFI QTSAVTCLQW 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCAGTTGA AGCACCTGAG GACCCTGCTG AGCCCTCAGG TGAGGAGTTG CGTGTCTCTC 60
CCCTCCCCCG CCCGCCCTAC GTTCCCAGAA CAGTAAGGGA ACTGCAGTTT AATGATGTTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR016024--ARM-type_fold
IPR011990--TPR-like_helical_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom
IPR011991--WHTH_DNA-bd_dom

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:1903561--C:extracellular vesicle
GO:0030992--C:intraciliary transport particle B
GO:0097598--C:sperm cytoplasmic droplet
GO:0097225--C:sperm midpiece
GO:0097228--C:sperm principal piece
GO:0060348--P:bone development
GO:0007420--P:brain development
GO:0031122--P:cytoplasmic microtubule organization
GO:0009953--P:dorsal/ventral pattern formation
GO:0008544--P:epidermis development
GO:0001947--P:heart looping
GO:0061525--P:hindgut development
GO:0070986--P:left/right axis specification
GO:0060173--P:limb development
GO:0050680--P:negative regulation of epithelial cell proliferation
GO:0001843--P:neural tube closure
GO:1905515--P:non-motile cilium assembly
GO:0007219--P:Notch signaling pathway
GO:0060021--P:palate development
GO:0045880--P:positive regulation of smoothened signaling pathway
GO:0016485--P:protein processing
GO:0007224--P:smoothened signaling pathway
GO:0021522--P:spinal cord motor neuron differentiation

KEGG

ocu:100348467

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001775	Ailuropoda melanoleuca	96.51	0.00e+00	3366.00
IUUC-Apl-004180	Anas platyrhynchos	80.56	0.00e+00	2976.00
IUUC-Bta-012784	Bos taurus	96.80	0.00e+00	3346.00
IUUC-Cfa-020359	Canis familiaris	96.11	0.00e+00	3385.00
IUUC-Cho-024397	Choloepus hoffmanni	84.51	0.00e+00	983.00
IUUC-Cin-025243	Ciona intestinalis	74.56	0.00e+00	791.00
IUUC-Csv-025964	Ciona savignyi	66.22	0.00e+00	1602.00
IUUC-Dno-029782	Dasypus novemcinctus	95.24	0.00e+00	2268.00
IUUC-Eca-033288	Equus caballus	97.14	0.00e+00	3405.00
IUUC-Fca-036387	Felis catus	96.28	0.00e+00	3418.00
IUUC-Hsa-046333	Homo sapiens	96.46	0.00e+00	1046.00
IUUC-Loc-052126	Lepisosteus oculatus	75.83	0.00e+00	2836.00
IUUC-Laf-054242	Loxodonta africana	96.91	0.00e+00	3402.00
IUUC-Mcc-055460	Macaca mulatta	90.77	0.00e+00	3217.00
IUUC-Meu-056864	Macropus eugenii	93.90	0.00e+00	3267.00
IUUC-Mmr-060951	Microcebus murinus	93.08	0.00e+00	3228.00
IUUC-Mdo-062290	Monodelphis domestica	95.55	0.00e+00	3348.00
IUUC-Mlu-067149	Myotis lucifugus	94.34	0.00e+00	3370.00
IUUC-Nle-069497	Nomascus leucogenys	90.46	0.00e+00	3247.00
IUUC-Opr-070642	Ochotona princeps	97.24	0.00e+00	3407.00
IUUC-Ola-086935	Oryzias latipes	65.47	0.00e+00	2356.00
IUUC-Ptr-090769	Pan troglodytes	94.34	0.00e+00	3402.00
IUUC-Psi-093021	Pelodiscus sinensis	89.64	0.00e+00	971.00
IUUC-Pva-102604	Pteropus vampyrus	94.63	0.00e+00	3299.00
IUUC-Rno-104875	Rattus norvegicus	92.97	0.00e+00	967.00
IUUC-Tgu-116577	Taeniopygia guttata	85.07	0.00e+00	951.00
IUUC-Tru-117611	Takifugu rubripes	68.67	0.00e+00	2579.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence