iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Zm00001d040390	Zm00001d040390_T006	Zm00001d040390_T006
Zm00001d040390	Zm00001d040390_T001	Zm00001d040390_T001
Zm00001d040390	Zm00001d040390_T002	Zm00001d040390_T002
Zm00001d040390	Zm00001d040390_T003	Zm00001d040390_T003
Zm00001d040390	Zm00001d040390_T007	Zm00001d040390_T007
Zm00001d040390	Zm00001d040390_T005	Zm00001d040390_T005

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E2/UBC	1.80e-41	143.1	43	173

Active Site

Position(s)	Description	Evidence
123	Glycyl thioester intermediate	{ECO:0000256\|PROSITE-ProRule:PRU00388}

Domain Profile

E2/UBC

   S: 1    RlkkelkelekdppegisakpvdesdltewevlilGpedtpYeggvFkleiefpedYPfkPPkvkfltkifhPnvyenGkvClsilkeee 90
           Rl+ el++l+    +g+sa p+ + ++ +w  +i G ++t Yeg  ++l + f+ +YP+kPPkv+f t++fhPnv+ +G++Cl+il+  +
   Q: 43   RLQSELMALMMGGDPGVSAFPEGD-NMLHWVGTIDGSAGTAYEGTSYRLALAFTAEYPYKPPKVRFDTPCFHPNVDVHGNICLDILQ--D 129
           99**********************.9************************************************************9..* PP
   S: 91   kWspalsvesvllsiqsllaepnpesplneeaaellkknreeyk 134
           kWs+a++v+++llsiqsll epn++spln++aa l+ ++++  +
   Q: 130  KWSSAYDVRTILLSIQSLLGEPNNDSPLNTQAAALWANQEAPAN 173
           **********************************9999887555 PP

Organism

Zea mays

Protein Sequence
(Fasta)

MTRGENQESQ TGNVPAASAA APGPKPASAG GGKGAEGQSV VRRLQSELMA LMMGGDPGVS 60
AFPEGDNMLH WVGTIDGSAG TAYEGTSYRL ALAFTAEYPY KPPKVRFDTP CFHPNVDVHG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CACCGCTCTC TATCCTCCCA CTCAAATACT CCTCAATAGC CATCGAGGAG AAGGGAGATA 60
GAAACGGGAG GGAACACCCA CTCGATCGTC AGCCATGACC CGGGGAGAGA ACCAGGAGTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0833--Ubl conjugation pathway

Interpro

IPR000608--UBQ-conjugat_E2
IPR023313--UBQ-conjugating_AS
IPR016135--UBQ-conjugating_enzyme/RWD

PROSITE

PS00183--UBIQUITIN_CONJUGAT_1
PS50127--UBIQUITIN_CONJUGAT_2

Pfam

PF00179--UQ_con

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Cho-024330	Choloepus hoffmanni	69.57	2.00e-47	180.00
IUUC-Dse-031516	Dothistroma septosporum	47.37	2.00e-38	151.00
IUUC-Gmo-038894	Gadus morhua	66.92	5.00e-51	192.00
IUUC-Gac-041346	Gasterosteus aculeatus	68.50	4.00e-50	189.00
IUUC-Hvu-047797	Hordeum vulgare	91.97	5.00e-75	272.00
IUUC-Lch-049761	Latimeria chalumnae	63.64	1.00e-49	188.00
IUUC-Loc-052297	Lepisosteus oculatus	67.86	3.00e-57	214.00
IUUC-Mmr-060747	Microcebus murinus	68.66	7.00e-53	198.00
IUUC-Ncr-068803	Neurospora crassa	59.69	2.00e-37	147.00
IUUC-Ola-086807	Oryzias latipes	71.21	5.00e-56	209.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence