iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017961

Ensembl Protein ID

Bra010036.1-P

UniProt Accession

M4D0N7; M4D0N7_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra010036	Bra010036.1	Bra010036.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	8.00e-27	93.2	287	323
UBD/Beta-Prp	4.60e-44	151.8	243	502

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvl 35
           gH++++t+la  s+ t+++s+s+D++i+vW+l +g +
   Q: 287  GHEGDITDLAVsSNnTFIASASNDCVIRVWRLPDGLP 323
           8**********9555*****************99976 PP

UBD/Beta-Prp

   S: 5    lkghhksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlsl 100
           ++gh+ +v +c  f +++++++tgs+d+ +kvw+++t  +l s  ghe+ +t++  s++  +++++s+D +i+vw l +g +v++l+gh+  v+++
   Q: 243  VRGHRNAV-YCAIFDRSGRYVITGSDDRLVKVWSMETAYCLTSCRGHEGDITDLAVSSNNTFIASASNDCVIRVWRLPDGLPVSVLRGHTGAVTAI 337
           56666655.55999********************************************************************************** PP
   S: 101  sfsp...sgdklvsGshdrtirvwdletgqclee..................tlsghdgvvncvvvhpdgnllvsGslDrtvrlWdl......... 166
           +fsp   s + l+s s+d t r+wd +  q                       ++++++ + c +++ +g+++v+Gs D+  r++++         
   Q: 338  AFSPrpgSPYQLLSSSDDGTCRIWDARGAQFAPRiylprppspdgknnlpssSNAQQSHQIFCCAFNANGSVFVTGSSDTLARVYSVwsankinnd 433
           ****98777**********************999******************99999999***************************999999999 PP
   S: 167  ...ktgkllrtltgghtdsvyslsfdsng..........................kelvsgsldgtvklw 207
              + +  ++ l g h+++v+ ++f+                               +v++s+dg+ ++w
   Q: 434  dpdQPNHEMDVLAG-HENDVNYVQFSGCAagykfavtdyskddsvpkfknswfchDNIVTCSRDGSAIIW 502
           88666666666777.*********6665566666666666777899999999**99************** PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MALRKNTPKA DSVSPPMKPL SLSKKLPGNV QMADPDIAQN VVPNIDLDMR EVYFLMLHLL 60
SSGPCQRTYA LLRHELLEHE LLPRRYHAWY SRSGLPSGDE NDDGDSFPLN YAELVKRYSH 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCTCTTA GGAAAAATAC TCCGAAAGCC GATTCAGTCT CTCCCCCGAT GAAACCTTTG 60
AGTTTATCTA AAAAATTGCC AGGGAATGTG CAGATGGCAG ACCCAGATAT TGCTCAAAAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR001487--Bromodomain
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50014--BROMODOMAIN_2
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00439--Bromodomain
PF00400--WD40

SMART

SM00297--BROMO
SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001113	Aegilops tauschii	49.82	0.00e+00	881.00
IUUC-Aml-002299	Ailuropoda melanoleuca	32.55	2.00e-74	274.00
IUUC-Atr-002600	Amborella trichopoda	68.01	0.00e+00	1115.00
IUUC-Apl-003700	Anas platyrhynchos	30.94	5.00e-63	236.00
IUUC-Aca-004474	Anolis carolinensis	32.48	3.00e-82	300.00
IUUC-Aly-006406	Arabidopsis lyrata	85.81	0.00e+00	2568.00
IUUC-Ath-006801	Arabidopsis thaliana	85.71	0.00e+00	2587.00
IUUC-Ame-010718	Astyanax mexicanus	30.81	6.00e-82	300.00
IUUC-Bta-013217	Bos taurus	30.66	9.00e-78	286.00
IUUC-Bdi-014797	Brachypodium distachyon	45.68	0.00e+00	763.00
IUUC-Bol-015737	Brassica oleracea	98.28	0.00e+00	2997.00
IUUC-Cja-018868	Callithrix jacchus	33.10	3.00e-82	300.00
IUUC-Cfa-021037	Canis familiaris	30.94	1.00e-78	289.00
IUUC-Cre-023003	Chlamydomonas reinhardtii	32.63	2.00e-34	140.00
IUUC-Csa-023618	Chlorocebus sabaeus	32.96	2.00e-82	301.00
IUUC-Csv-025813	Ciona savignyi	28.02	2.00e-60	227.00
IUUC-Dre-028029	Danio rerio	31.95	5.00e-80	293.00
IUUC-Dno-030048	Dasypus novemcinctus	32.55	2.00e-74	275.00
IUUC-Dor-031052	Dipodomys ordii	27.63	4.00e-39	157.00
IUUC-Dme-031752	Drosophila melanogaster	28.11	3.00e-70	261.00
IUUC-Ete-032717	Echinops telfairi	33.93	8.00e-39	156.00
IUUC-Eca-034349	Equus caballus	30.34	2.00e-70	261.00
IUUC-Eeu-034688	Erinaceus europaeus	33.98	7.00e-40	159.00
IUUC-Fca-035485	Felis catus	30.50	2.00e-70	261.00
IUUC-Gga-040798	Gallus gallus	31.25	5.00e-73	270.00
IUUC-Gma-043340	Glycine max	56.06	0.00e+00	1696.00
IUUC-Ggo-045500	Gorilla gorilla	30.64	2.00e-76	281.00
IUUC-Hsa-046350	Homo sapiens	30.80	2.00e-78	288.00
IUUC-Hvu-047706	Hordeum vulgare	73.39	5.00e-136	476.00
IUUC-Itr-047962	Ictidomys tridecemlineatus	28.48	1.00e-23	104.00
IUUC-Lch-049662	Latimeria chalumnae	31.05	1.00e-80	295.00
IUUC-Loc-052853	Lepisosteus oculatus	31.60	5.00e-77	283.00
IUUC-Laf-053848	Loxodonta africana	30.32	9.00e-76	279.00
IUUC-Mcc-054638	Macaca mulatta	30.66	5.00e-78	286.00
IUUC-Meu-056321	Macropus eugenii	28.82	6.00e-57	216.00
IUUC-Mtr-058094	Medicago truncatula	56.50	0.00e+00	1660.00
IUUC-Mmr-061227	Microcebus murinus	30.66	2.00e-78	288.00
IUUC-Mdo-062074	Monodelphis domestica	30.70	1.00e-77	285.00
IUUC-Mmu-064075	Mus musculus	31.19	2.00e-79	292.00
IUUC-Mac-065343	Musa acuminata	50.78	0.00e+00	1501.00
IUUC-Mpu-066643	Mustela putorius furo	31.51	7.00e-70	259.00
IUUC-Mlu-067928	Myotis lucifugus	32.50	2.00e-74	274.00
IUUC-Nle-069402	Nomascus leucogenys	30.64	2.00e-75	278.00
IUUC-Ont-072221	Oreochromis niloticus	32.52	4.00e-81	296.00
IUUC-Oan-072954	Ornithorhynchus anatinus	31.27	2.00e-82	301.00
IUUC-Ocu-074456	Oryctolagus cuniculus	30.22	1.00e-72	269.00
IUUC-Oba-075709	Oryza barthii	49.74	0.00e+00	1378.00
IUUC-Obr-076619	Oryza brachyantha	49.26	0.00e+00	1382.00
IUUC-Ogl-077493	Oryza glaberrima	48.04	0.00e+00	1127.00
IUUC-Ogu-078641	Oryza glumaepatula	46.98	0.00e+00	984.00
IUUC-Oin-079669	Oryza indica	68.51	0.00e+00	693.00
IUUC-Olo-080755	Oryza longistaminata	47.90	0.00e+00	1091.00
IUUC-Oni-082991	Oryza nivara	46.57	0.00e+00	1068.00
IUUC-Opu-083233	Oryza punctata	49.97	0.00e+00	1399.00
IUUC-Oru-085195	Oryza rufipogon	49.57	0.00e+00	1377.00
IUUC-Ola-086648	Oryzias latipes	32.52	2.00e-81	297.00
IUUC-Oga-088578	Otolemur garnettii	32.81	5.00e-72	266.00
IUUC-Oar-090214	Ovis aries	31.16	2.00e-69	258.00
IUUC-Ptr-091213	Pan troglodytes	30.80	3.00e-78	288.00
IUUC-Pan-092444	Papio anubis	30.80	2.00e-78	288.00
IUUC-Psi-093271	Pelodiscus sinensis	32.28	1.00e-67	252.00
IUUC-Pma-094427	Petromyzon marinus	33.78	9.00e-41	160.00
IUUC-Ppa-095793	Physcomitrella patens	55.46	0.00e+00	830.00
IUUC-Pfo-096191	Poecilia formosa	32.90	2.00e-80	294.00
IUUC-Pab-098402	Pongo abelii	32.96	4.00e-82	300.00
IUUC-Pop-099185	Populus trichocarpa	57.39	0.00e+00	1727.00
IUUC-Pca-101128	Procavia capensis	31.83	2.00e-68	254.00
IUUC-Ppe-101849	Prunus persica	55.40	0.00e+00	1702.00
IUUC-Pva-102782	Pteropus vampyrus	30.08	2.00e-68	255.00
IUUC-Rno-105687	Rattus norvegicus	31.05	2.00e-78	288.00
IUUC-Sha-106680	Sarcophilus harrisii	30.91	3.00e-76	281.00
IUUC-Sit-110017	Setaria italica	52.90	0.00e+00	765.00
IUUC-Sly-111348	Solanum lycopersicum	66.43	0.00e+00	1025.00
IUUC-Sar-113004	Sorex araneus	29.47	3.00e-64	241.00
IUUC-Sbi-114195	Sorghum bicolor	66.62	0.00e+00	796.00
IUUC-Ssc-115461	Sus scrofa	32.16	7.00e-73	269.00
IUUC-Tru-117625	Takifugu rubripes	32.71	2.00e-80	295.00
IUUC-Tsy-119003	Tarsius syrichta	28.18	3.00e-61	231.00
IUUC-Tni-120716	Tetraodon nigroviridis	32.52	1.00e-81	298.00
IUUC-Tca-121098	Theobroma cacao	56.40	0.00e+00	1741.00
IUUC-Tae-125478	Triticum aestivum	55.68	0.00e+00	1036.00
IUUC-Tur-126809	Triticum urartu	54.18	0.00e+00	1022.00
IUUC-Ttr-128427	Tursiops truncatus	32.87	4.00e-74	273.00
IUUC-Vpa-130160	Vicugna pacos	32.61	3.00e-73	271.00
IUUC-Vvi-131362	Vitis vinifera	57.50	0.00e+00	1783.00
IUUC-Xtr-132717	Xenopus tropicalis	32.62	6.00e-82	300.00
IUUC-Xma-134120	Xiphophorus maculatus	32.27	3.00e-80	293.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence