iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Dre-027566

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Striatin, calmodulin-binding protein 3

Genbank Nucleotide ID

BX324186

Gene Name

strn3

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSDARG00000001729.11	ENSDART00000126967.2	ENSDARP00000104487.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.50e-25	88.4	506	537
UBD/Beta-Prp	1.50e-48	166.5	397	595

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclafsd..tllvsGsdDgtikvWDl 30
           gH+d v++la+s+  ++l+s+s Dgtik+WD+
   Q: 506  GHSDAVWGLAYSGikNRLLSCSADGTIKLWDP 537
           8**********666689**************6 PP

UBD/Beta-Prp

   S: 47   slsgheaevtavkfspdgkilvtgseDrtikvwdls...........tgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdle 124
           +l +h ++v+a+ f+p +++lvt+seD+t+k+w+l            + ++++t++gh   vlsl++  sg+   sG+ d+ti+ w+++
   Q: 397  TLRSHFDGVRALAFHPVEPVLVTVSEDHTLKLWNLHktvpakksasfDVEPIYTFRGHIGPVLSLAVTSSGEQCFSGGIDSTIQWWNIP 485
           8999*******************************99***************************************************9 PP
   S: 125  tgqclee..........tlsghdgvvncvvvhpdgnllvsGslDrtvrlWdl.ktgkllrtltgghtdsvyslsfdsng...kelvsgs 199
           +  +             tl gh+++v+++++++ +n l s+s+D+t++lWd  +   +l t+ + ++d    +s+d ng    ++v+  
   Q: 486  SSNVDPYdtydpsvlagTLLGHSDAVWGLAYSGIKNRLLSCSADGTIKLWDPqEKIPCLSTFNS-DKDHGVPTSVDFNGcdpAHMVASY 573
           98877667899****************************************956668*****77.666666666555665689****** PP
   S: 200  ldgtvklwdlqtgecvrtlngh 221
           + g+  ++dl+t++ v+ + ++
   Q: 574  NTGDAVVYDLETSQPVVVFSAQ 595
           *************999988876 PP

Organism

Danio rerio

Protein Sequence
(Fasta)

MDEQPGGGGG GGGGGGGGGM AAQRQQQQPA PQQGNNSINP QMNSAGGAPM VQQQQDEMPR 60
PQQYTIPGIL HYIQHEWARF EMERAHWEVE RAELQARIAF LQGERKGQEN LKNDLVRRIK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ACATCCAGGG ATCGGACTAA TGGCGGCCGG CAAATCCGTG CGCTGACACG AAAACCACAA 60
CAGCCGCTCA GGTGCCAGCC TATTCGGTTG GGGGCAGGGC GACGTCGCAT CGCTAAGCGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR020472--G-protein_beta_WD-40_rep
IPR013258--Striatin_N
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08232--Striatin
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Afu-009096	Aspergillus fumigatus	41.89	2.00e-14	74.70
IUUC-Ate-010457	Aspergillus terreus	42.31	4.00e-18	87.00
IUUC-Ame-011915	Astyanax mexicanus	90.02	0.00e+00	1099.00
IUUC-Cel-018443	Caenorhabditis elegans	46.51	2.00e-104	373.00
IUUC-Csv-026143	Ciona savignyi	58.44	2.00e-131	462.00
IUUC-Cne-026783	Cryptococcus neoformans	34.70	5.00e-61	229.00
IUUC-Dse-031486	Dothistroma septosporum	26.79	7.00e-36	145.00
IUUC-Dme-032158	Drosophila melanogaster	51.81	0.00e+00	655.00
IUUC-Ete-032770	Echinops telfairi	71.10	0.00e+00	930.00
IUUC-Fox-037678	Fusarium oxysporum	27.19	1.00e-34	142.00
IUUC-Fso-038364	Fusarium solani	27.11	3.00e-35	144.00
IUUC-Gmo-039653	Gadus morhua	69.35	0.00e+00	880.00
IUUC-Gac-042142	Gasterosteus aculeatus	74.42	0.00e+00	1065.00
IUUC-Ggo-045607	Gorilla gorilla	82.61	0.00e+00	662.00
IUUC-Itr-048177	Ictidomys tridecemlineatus	81.59	0.00e+00	646.00
IUUC-Loc-052193	Lepisosteus oculatus	84.91	0.00e+00	718.00
IUUC-Mga-059885	Meleagris gallopavo	83.28	1.00e-179	622.00
IUUC-Mmu-063914	Mus musculus	79.61	0.00e+00	660.00
IUUC-Mpu-066348	Mustela putorius furo	77.89	0.00e+00	1063.00
IUUC-Nfi-068560	Neosartorya fischeri	38.55	3.00e-17	84.00
IUUC-Ncr-068831	Neurospora crassa	38.61	4.00e-21	97.40
IUUC-Opr-070496	Ochotona princeps	77.51	2.00e-165	576.00
IUUC-Ont-072075	Oreochromis niloticus	77.03	0.00e+00	1085.00
IUUC-Ola-086321	Oryzias latipes	80.10	0.00e+00	648.00
IUUC-Ptt-103828	Puccinia triticina	37.08	1.00e-46	181.00
IUUC-Sar-113296	Sorex araneus	68.92	0.00e+00	723.00
IUUC-Tru-118134	Takifugu rubripes	80.53	0.00e+00	1057.00
IUUC-Tsy-119356	Tarsius syrichta	70.84	1.00e-153	536.00
IUUC-Tni-120791	Tetraodon nigroviridis	74.09	0.00e+00	1025.00
IUUC-Tre-122113	Trichoderma reesei	27.61	1.00e-38	155.00
IUUC-Tbe-127691	Tupaia belangeri	71.93	6.00e-149	521.00
IUUC-Ttr-128600	Tursiops truncatus	82.10	0.00e+00	660.00
IUUC-Xtr-132330	Xenopus tropicalis	77.49	0.00e+00	657.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence