iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSORLG00000011039.1	ENSORLT00000013851.1	ENSORLP00000013850.1
ENSORLG00000011039.1	ENSORLT00000013855.1	ENSORLP00000013854.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.40e-12	47.7	51	80

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvW 28
           gH+d v+c+a+  d ++++sGs D++i +W
   Q: 51   GHKDIVYCVAYaKDgKRFASGSADKSIIIW 80
           8***********777*************** PP

Organism

Oryzias latipes

Protein Sequence
(Fasta)

MRAAQVWQDK ICERVYDVAF KPDGSQLIVA AGLRVLVYDA ADGANIQPLK GHKDIVYCVA 60
YAKDGKRFAS GSADKSIIIW TSKLEGILKY TKTWNPLFSV FVLFIFRHND SIQCVSYNPV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAGAGCCG CACAAGTGTG GCAGGATAAA ATTTGCGAAC GGTAAGGGTC TAATTTATTT 60
TGACTCGGAT GACAAGCGAG ACCCGGAGAT GGAATGTAAC GCTAGGTAGC TAGCAACGGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0853--WD repeat

Interpro

IPR011990--TPR-like_helical_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0016021--C:integral component of membrane

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001933	Ailuropoda melanoleuca	73.21	0.00e+00	1892.00
IUUC-Apl-003504	Anas platyrhynchos	64.14	0.00e+00	1620.00
IUUC-Aca-004767	Anolis carolinensis	72.38	0.00e+00	1914.00
IUUC-Ame-011642	Astyanax mexicanus	73.21	0.00e+00	1888.00
IUUC-Bta-012969	Bos taurus	72.06	0.00e+00	1816.00
IUUC-Cel-018670	Caenorhabditis elegans	35.78	0.00e+00	845.00
IUUC-Cja-019249	Callithrix jacchus	69.09	0.00e+00	1738.00
IUUC-Cfa-020915	Canis familiaris	73.66	0.00e+00	1845.00
IUUC-Cpo-021888	Cavia porcellus	68.83	0.00e+00	1774.00
IUUC-Cre-022789	Chlamydomonas reinhardtii	45.80	0.00e+00	1087.00
IUUC-Csa-023533	Chlorocebus sabaeus	72.24	0.00e+00	1836.00
IUUC-Cin-025121	Ciona intestinalis	53.08	0.00e+00	1278.00
IUUC-Csv-026240	Ciona savignyi	56.97	0.00e+00	1448.00
IUUC-Dno-029685	Dasypus novemcinctus	68.09	0.00e+00	1683.00
IUUC-Dme-032005	Drosophila melanogaster	22.49	7.00e-07	50.10
IUUC-Ete-032682	Echinops telfairi	69.08	0.00e+00	1400.00
IUUC-Eca-033831	Equus caballus	73.70	0.00e+00	1917.00
IUUC-Eeu-034919	Erinaceus europaeus	68.57	0.00e+00	808.00
IUUC-Fca-036559	Felis catus	73.32	0.00e+00	1870.00
IUUC-Fal-037340	Ficedula albicollis	62.13	0.00e+00	1570.00
IUUC-Gga-040595	Gallus gallus	64.30	0.00e+00	1637.00
IUUC-Ggo-045356	Gorilla gorilla	70.57	0.00e+00	1828.00
IUUC-Hsa-046135	Homo sapiens	70.46	0.00e+00	1826.00
IUUC-Itr-048228	Ictidomys tridecemlineatus	66.32	0.00e+00	1638.00
IUUC-Lch-050183	Latimeria chalumnae	75.21	0.00e+00	1120.00
IUUC-Loc-052049	Lepisosteus oculatus	67.78	0.00e+00	1742.00
IUUC-Laf-053728	Loxodonta africana	72.49	0.00e+00	1885.00
IUUC-Mcc-054971	Macaca mulatta	71.33	0.00e+00	1842.00
IUUC-Meu-056446	Macropus eugenii	68.31	0.00e+00	1792.00
IUUC-Mga-059296	Meleagris gallopavo	70.72	0.00e+00	1873.00
IUUC-Mmr-061232	Microcebus murinus	71.10	0.00e+00	1833.00
IUUC-Mdo-062115	Monodelphis domestica	73.93	0.00e+00	1922.00
IUUC-Mmu-063664	Mus musculus	72.71	0.00e+00	1901.00
IUUC-Mpu-066136	Mustela putorius furo	70.01	0.00e+00	1815.00
IUUC-Mlu-068238	Myotis lucifugus	70.24	0.00e+00	1818.00
IUUC-Nle-069003	Nomascus leucogenys	69.65	0.00e+00	1737.00
IUUC-Ont-072080	Oreochromis niloticus	82.55	0.00e+00	2151.00
IUUC-Oan-072891	Ornithorhynchus anatinus	63.65	0.00e+00	684.00
IUUC-Ocu-074262	Oryctolagus cuniculus	71.78	0.00e+00	1816.00
IUUC-Oga-088722	Otolemur garnettii	71.51	0.00e+00	1819.00
IUUC-Oar-089249	Ovis aries	67.61	0.00e+00	1660.00
IUUC-Ptr-090752	Pan troglodytes	69.16	0.00e+00	1781.00
IUUC-Pan-092472	Papio anubis	72.47	0.00e+00	1837.00
IUUC-Psi-093335	Pelodiscus sinensis	78.11	0.00e+00	1648.00
IUUC-Pma-094520	Petromyzon marinus	68.03	0.00e+00	1447.00
IUUC-Ppa-095600	Physcomitrella patens	56.59	2.00e-36	144.00
IUUC-Pfo-096526	Poecilia formosa	77.90	0.00e+00	1998.00
IUUC-Pab-098428	Pongo abelii	70.67	0.00e+00	895.00
IUUC-Pca-100233	Procavia capensis	75.52	0.00e+00	682.00
IUUC-Pva-103064	Pteropus vampyrus	63.60	0.00e+00	1591.00
IUUC-Rno-105764	Rattus norvegicus	72.86	0.00e+00	1889.00
IUUC-Sha-106649	Sarcophilus harrisii	73.96	0.00e+00	1930.00
IUUC-Smo-109478	Selaginella moellendorffii	38.10	0.00e+00	735.00
IUUC-Tgu-116870	Taeniopygia guttata	71.41	0.00e+00	1832.00
IUUC-Tru-118661	Takifugu rubripes	76.05	0.00e+00	1985.00
IUUC-Tsy-119640	Tarsius syrichta	69.15	2.00e-84	307.00
IUUC-Tni-120812	Tetraodon nigroviridis	76.06	0.00e+00	1963.00
IUUC-Ttr-128862	Tursiops truncatus	70.98	0.00e+00	1854.00
IUUC-Vpa-130049	Vicugna pacos	58.42	0.00e+00	828.00
IUUC-Xtr-131914	Xenopus tropicalis	75.22	0.00e+00	1597.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence