iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-100032

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Transducin family protein

Genbank Nucleotide ID

CM000343

Gene Name

POPTRDRAFT_217471; POPTR_0007s05350g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0007s05350	POPTR_0007s05350.1	POPTR_0007s05350.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.20e-22	80.1	259	292
UBD/Beta-Prp	2.00e-41	143.2	151	382

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sd.tllvsGsdDgtikvWDlr 31
           gHt+sv ++++  ++ + ++s+s Dg i +WD r
   Q: 259  GHTASVEDIQWspTEdHVFASCSVDGHIAIWDAR 292
           8***********6335779*************76 PP

UBD/Beta-Prp

   S: 50   gheaevtavkfspdgkilvtgseDrtikvwdls.....................tgkcvhtlkghedsvlslsfsp.sgdklvsGshdrti 118
           g+ + ++a+  +p+  i ++ s+ + +++w++s                     +  ++  +kgh+d+ +++++sp  + +lv+G+  + i
   Q: 151  GCVNRIRAMIQNPH--ICASWSDAGYVQIWNFSthlnalaesetevprggssvfNQAPLFNFKGHKDEGYAIDWSPrVTGRLVTGDCKSCI 239
           33333444444444..77777777999***99999999999999999999999999999*****************6669*********** PP
   S: 119  rvwdletgqclee...tlsghdgvvncvvvhpdg.nllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsng.kelvsgsldgtv 204
           ++w+  +g   +    +++gh+++v  ++++p++  +++s+s D+ + +Wd + gk      ++h+ +v+ ls+++     l+sgs+dgt 
   Q: 240  HLWEPTSGATWNVdatPFTGHTASVEDIQWSPTEdHVFASCSVDGHIAIWDARLGKSPAISFKAHNADVNVLSWNRLAsVMLASGSDDGTF 330
           ***999998776678999**************9999****************999876655445*********9997658999******** PP
   S: 205  klwdlq...tgecvrtlnghtdnvksvrfspnde.rlvsgssDgsiriWdlr 252
            + dl+    ++++  +  h+++++s++ sp++   l++ ssD+++ iWdl 
   Q: 331  SIRDLRllsPKSVLAHFDYHKRPITSIEWSPHEAsTLAVSSSDNQLTIWDLS 382
           *****99988889999999***********776515566669*******975 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MVRSIKNPKK AKRKIKKGDG SSSSSSIPSM PTKVWQPGVD NLEEGEELEC DPTAYNSLHA 60
FHIGWPCLSF DVVRDSLGLL RTDFPHSVYF VAGTQAENPD WNSIGIFKIS NVSGKRHNSD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CACCACTTGA AAGAAAAGGG AAGAAAGAAA CTAGTAGACC GTAAAACCCT AGTAGCTTCC 60
CAACCCCAAC CCCAACCCCA ACCCCCTCTC CATCGTGTCA CAAATAATCA GCACATCTTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR022052--Histone-bd_RBBP4_N
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12265--CAF1C_H4-bd
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005634--C:nucleus

KEGG

pop:POPTR_0007s05350g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002309	Ailuropoda melanoleuca	45.11	2.00e-92	332.00
IUUC-Aca-004760	Anolis carolinensis	42.86	1.00e-83	302.00
IUUC-Ago-007735	Ashbya gossypii	38.44	7.00e-72	264.00
IUUC-Acl-008294	Aspergillus clavatus	39.86	2.00e-75	276.00
IUUC-Afl-008486	Aspergillus flavus	40.00	2.00e-75	275.00
IUUC-Afu-009019	Aspergillus fumigatus	40.32	9.00e-76	276.00
IUUC-Ang-009641	Aspergillus niger	39.36	3.00e-72	265.00
IUUC-Ate-010426	Aspergillus terreus	40.55	3.00e-76	278.00
IUUC-Ame-010856	Astyanax mexicanus	42.25	4.00e-88	317.00
IUUC-Bgr-012258	Blumeria graminis	38.84	2.00e-60	226.00
IUUC-Bta-012437	Bos taurus	44.63	5.00e-91	327.00
IUUC-Bci-013647	Botrytis cinerea	39.86	7.00e-73	267.00
IUUC-Cel-018454	Caenorhabditis elegans	42.03	9.00e-87	313.00
IUUC-Cja-018859	Callithrix jacchus	45.61	1.00e-91	329.00
IUUC-Cfa-020912	Canis familiaris	44.87	7.00e-91	327.00
IUUC-Cpo-021368	Cavia porcellus	44.66	9.00e-92	330.00
IUUC-Cre-022850	Chlamydomonas reinhardtii	39.86	8.00e-75	273.00
IUUC-Csa-023599	Chlorocebus sabaeus	44.89	3.00e-92	331.00
IUUC-Cin-025718	Ciona intestinalis	43.26	2.00e-93	335.00
IUUC-Csv-025806	Ciona savignyi	46.41	3.00e-75	274.00
IUUC-Cgl-026766	Colletotrichum gloeosporioides	34.81	3.00e-60	225.00
IUUC-Cne-026781	Cryptococcus neoformans	41.10	2.00e-75	275.00
IUUC-Cme-027129	Cyanidioschyzon merolae	30.77	6.00e-45	174.00
IUUC-Dre-028225	Danio rerio	44.36	4.00e-91	327.00
IUUC-Dno-029792	Dasypus novemcinctus	44.84	2.00e-88	319.00
IUUC-Dor-030773	Dipodomys ordii	44.13	9.00e-45	173.00
IUUC-Dse-031289	Dothistroma septosporum	40.00	9.00e-71	260.00
IUUC-Eca-033618	Equus caballus	45.11	3.00e-90	325.00
IUUC-Fca-036102	Felis catus	45.50	7.00e-92	330.00
IUUC-Fox-037899	Fusarium oxysporum	39.05	1.00e-71	263.00
IUUC-Fso-038130	Fusarium solani	39.29	3.00e-72	265.00
IUUC-Gmo-038741	Gadus morhua	43.51	4.00e-88	317.00
IUUC-Ggr-040086	Gaeumannomyces graminis	38.32	3.00e-71	261.00
IUUC-Gac-042243	Gasterosteus aculeatus	43.33	3.00e-90	324.00
IUUC-Ggo-044564	Gorilla gorilla	44.66	2.00e-91	328.00
IUUC-Hsa-046021	Homo sapiens	45.61	2.00e-93	335.00
IUUC-Itr-048189	Ictidomys tridecemlineatus	44.18	1.00e-88	319.00
IUUC-Kpa-049271	Komagataella pastoris	39.61	2.00e-69	256.00
IUUC-Lch-049974	Latimeria chalumnae	42.22	1.00e-87	316.00
IUUC-Lma-053010	Leptosphaeria maculans	37.27	1.00e-69	256.00
IUUC-Laf-054058	Loxodonta africana	46.56	1.00e-94	339.00
IUUC-Mcc-055246	Macaca mulatta	45.05	7.00e-94	337.00
IUUC-Meu-056795	Macropus eugenii	43.33	7.00e-89	320.00
IUUC-Mor-057175	Magnaporthe oryzae	39.43	8.00e-72	264.00
IUUC-Mpo-057388	Magnaporthe poae	36.84	2.00e-57	215.00
IUUC-Mla-058904	Melampsora laricipopulina	41.10	4.00e-73	268.00
IUUC-Mvi-060525	Microbotryum violaceum	38.95	7.00e-70	257.00
IUUC-Mmr-060905	Microcebus murinus	44.81	9.00e-92	330.00
IUUC-Mmu-063428	Mus musculus	45.37	6.00e-93	333.00
IUUC-Mpu-066062	Mustela putorius furo	44.89	2.00e-92	332.00
IUUC-Mlu-068115	Myotis lucifugus	51.13	9.00e-56	209.00
IUUC-Nfi-068512	Neosartorya fischeri	40.09	3.00e-74	272.00
IUUC-Ncr-068629	Neurospora crassa	39.00	4.00e-70	258.00
IUUC-Nle-070016	Nomascus leucogenys	45.00	8.00e-91	326.00
IUUC-Ont-072230	Oreochromis niloticus	43.99	3.00e-92	331.00
IUUC-Oan-072759	Ornithorhynchus anatinus	32.61	1.00e-57	216.00
IUUC-Ocu-074511	Oryctolagus cuniculus	45.37	1.00e-90	326.00
IUUC-Oru-085056	Oryza rufipogon	62.88	6.00e-126	443.00
IUUC-Ola-087066	Oryzias latipes	42.92	3.00e-86	311.00
IUUC-Olu-087594	Ostreococcus lucimarinus	47.42	1.00e-100	359.00
IUUC-Oga-087974	Otolemur garnettii	45.11	4.00e-90	324.00
IUUC-Oar-089902	Ovis aries	44.63	2.00e-90	325.00
IUUC-Ptr-090469	Pan troglodytes	42.72	2.00e-86	311.00
IUUC-Pan-092858	Papio anubis	44.89	3.00e-92	331.00
IUUC-Pno-094919	Phaeosphaeria nodorum	37.91	6.00e-67	247.00
IUUC-Pfo-096535	Poecilia formosa	43.40	6.00e-90	323.00
IUUC-Pab-098478	Pongo abelii	44.66	5.00e-92	330.00
IUUC-Pca-100403	Procavia capensis	47.54	5.00e-70	256.00
IUUC-Pva-102423	Pteropus vampyrus	44.89	2.00e-92	332.00
IUUC-Pte-104051	Pyrenophora teres	38.89	3.00e-69	255.00
IUUC-Pyt-104644	Pyrenophora triticirepentis	38.75	2.00e-69	256.00
IUUC-Rno-106118	Rattus norvegicus	45.50	4.00e-88	318.00
IUUC-Sha-106564	Sarcophilus harrisii	42.86	2.00e-74	271.00
IUUC-Sja-107969	Schizosaccharomyces japonicus	41.31	5.00e-82	297.00
IUUC-Ssl-108452	Sclerotinia sclerotiorum	39.16	1.00e-73	270.00
IUUC-Sar-113342	Sorex araneus	45.45	7.00e-85	306.00
IUUC-Sre-115098	Sporisorium reilianum	41.70	6.00e-78	284.00
IUUC-Ssc-115496	Sus scrofa	44.42	7.00e-90	323.00
IUUC-Tru-117662	Takifugu rubripes	43.51	5.00e-88	317.00
IUUC-Tni-120564	Tetraodon nigroviridis	42.62	2.00e-73	268.00
IUUC-Tre-122239	Trichoderma reesei	39.86	3.00e-74	271.00
IUUC-Tvi-122589	Trichoderma virens	39.62	2.00e-74	272.00
IUUC-Ttr-128383	Tursiops truncatus	44.18	8.00e-90	323.00
IUUC-Uma-129345	Ustilago maydis	41.61	1.00e-78	286.00
IUUC-Vda-129893	Verticillium dahliae	39.06	6.00e-72	264.00
IUUC-Xtr-132603	Xenopus tropicalis	45.37	4.00e-97	348.00
IUUC-Xma-133149	Xiphophorus maculatus	43.94	4.00e-91	327.00
IUUC-Zma-135548	Zea mays	66.97	5.00e-163	566.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence