iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress
DNA & RNA Element
microRNA	RAID2
Protein-protein Interaction
iRefIndex
Post-translational Modifications (PTMs)
CPLM
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UBL/NEDD8	0	1310.8	685	760
ULD/UDP/UBQ/UBQ_PIM	2.10e-292	944.0	685	757

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UBL/NEDD8

   S: 1    mlikvktLtgkeieieieesdtierikerveekeGiPPsqqrliyaGkqleddktaadynlekgsvLhLvLaLrGG 76
           m+i+vktLtgk+i++e+e+sdtie++k+++++keGiPP+qqrli+aGkqled++t++dyn++k+s+LhLvL+LrGG
   Q: 685  MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 760
           89*************************************************************************9 PP

ULD/UDP/UBQ/UBQ_PIM

   S: 1    mkltvktlkgkefelevseddtveelKekiakesgvppeqqkLIyaGkiLkDdttLselgikdgsvvhlvvkk 73
           m+++vktl+gk+++lev+++dt+e++K+ki+++ g+pp+qq+LI+aGk+L+D +tLs+++i+++s++hlv++ 
   Q: 685  MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 757
           99********************************************************************986 PP

Organism

Drosophila melanogaster

Protein Sequence
(Fasta)

MQIFVKTLTG KTITLEVEPS DTIENVKAKI QDKEGIPPDQ QRLIFAGKQL EDGRTLSDYN 60
IQKESTLHLV LRLRGGMQIF VKTLTGKTIT LEVEPSDTIE NVKAKIQDKE GIPPDQQRLI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCAACGCTCA ACACATCACA CTTTTAAAAC ACCCTTTACC TACACAGAAT TACTTTTTAA 60
ATTTCCAGTC AAGCTGCGAG TTTCAAAATT ATAGCCGGTA GAGAAGACAG TGCTATTTCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR019956--Ubiquitin
IPR029071--Ubiquitin-rel_dom
IPR019954--Ubiquitin_CS
IPR000626--Ubiquitin_dom

PROSITE

PS00299--UBIQUITIN_1
PS50053--UBIQUITIN_2

Pfam

PF00240--ubiquitin

PRINTS

PR00348--UBIQUITIN

SMART

SM00213--UBQ

Gene Ontology

GO:0005737--C:cytoplasm

KEGG

dme:Dmel_CG11624

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006562	Arabidopsis lyrata	92.48	0.00e+00	977.00
IUUC-Ath-006600	Arabidopsis thaliana	95.84	0.00e+00	871.00
IUUC-Ang-009646	Aspergillus niger	96.05	1.00e-166	578.00
IUUC-Ame-011696	Astyanax mexicanus	97.63	0.00e+00	729.00
IUUC-Bol-015598	Brassica oleracea	95.84	0.00e+00	871.00
IUUC-Cel-018571	Caenorhabditis elegans	98.43	0.00e+00	1476.00
IUUC-Cfa-020579	Canis familiaris	99.74	0.00e+00	753.00
IUUC-Csv-026265	Ciona savignyi	94.64	0.00e+00	1366.00
IUUC-Dre-028641	Danio rerio	100.00	0.00e+00	1199.00
IUUC-Dno-029812	Dasypus novemcinctus	99.74	0.00e+00	753.00
IUUC-Gac-042568	Gasterosteus aculeatus	99.34	0.00e+00	1190.00
IUUC-Gma-043881	Glycine max	95.87	0.00e+00	1015.00
IUUC-Ggo-044799	Gorilla gorilla	99.48	0.00e+00	750.00
IUUC-Hsa-046405	Homo sapiens	99.85	0.00e+00	1349.00
IUUC-Lpe-050731	Leersia perrieri	34.82	2.00e-43	168.00
IUUC-Lma-053015	Leptosphaeria maculans	94.84	4.00e-168	583.00
IUUC-Laf-053548	Loxodonta africana	99.74	0.00e+00	753.00
IUUC-Mcc-055561	Macaca mulatta	100.00	0.00e+00	1199.00
IUUC-Mtr-058240	Medicago truncatula	95.93	0.00e+00	1449.00
IUUC-Mla-058957	Melampsora laricipopulina	95.86	0.00e+00	1014.00
IUUC-Mdo-062630	Monodelphis domestica	99.81	0.00e+00	1051.00
IUUC-Mmu-063593	Mus musculus	99.30	0.00e+00	1390.00
IUUC-Mlu-068100	Myotis lucifugus	99.67	2.00e-174	603.00
IUUC-Ncr-068770	Neurospora crassa	96.05	4.00e-166	576.00
IUUC-Nle-069526	Nomascus leucogenys	99.67	2.00e-174	603.00
IUUC-Opu-083917	Oryza punctata	29.38	8.00e-30	124.00
IUUC-Ola-087192	Oryzias latipes	95.34	0.00e+00	1178.00
IUUC-Oar-089386	Ovis aries	95.04	0.00e+00	973.00
IUUC-Ptr-091261	Pan troglodytes	99.74	0.00e+00	753.00
IUUC-Pan-092134	Papio anubis	99.78	0.00e+00	902.00
IUUC-Pab-097884	Pongo abelii	99.84	0.00e+00	1199.00
IUUC-Pop-099637	Populus trichocarpa	95.80	0.00e+00	727.00
IUUC-Pgr-103301	Puccinia graminis	96.06	0.00e+00	1161.00
IUUC-Rno-105199	Rattus norvegicus	99.87	0.00e+00	1502.00
IUUC-Sce-106142	Saccharomyces cerevisiae	96.05	0.00e+00	726.00
IUUC-Sha-106780	Sarcophilus harrisii	98.69	6.00e-171	592.00
IUUC-Smo-109259	Selaginella moellendorffii	94.74	0.00e+00	1288.00
IUUC-Stu-112256	Solanum tuberosum	96.05	0.00e+00	1015.00
IUUC-Ssc-115672	Sus scrofa	99.44	0.00e+00	1046.00
IUUC-Tca-120959	Theobroma cacao	95.62	0.00e+00	870.00
IUUC-Tur-126025	Triticum urartu	96.05	0.00e+00	1016.00
IUUC-Ttr-128311	Tursiops truncatus	99.34	0.00e+00	898.00
IUUC-Vvi-130874	Vitis vinifera	87.39	0.00e+00	1292.00
IUUC-Xtr-132052	Xenopus tropicalis	99.23	0.00e+00	1256.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence