iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sha-107438

Ensembl Protein ID

ENSSHAP00000022226.1

UniProt Accession

G3X3H1; G3X3H1_SARHA

Genbank Protein ID

ENSSHAP00000022226

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AEFK01022314

Gene Name

WDR34

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSHAG00000018803.1	ENSSHAT00000022403.1	ENSSHAP00000022226.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.20e-23	82.4	202	237

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf....sdtl.....lvsGsdDgtikvWD 29
           +Htd+v+ +a+       +     l+s s Dg++ +W 
   Q: 202  THTDPVYQVAWlpepR--HshrfqLLSVSTDGKVLLWQ 237
           5***********6651..3455679************5 PP

Organism

Sarcophilus harrisii

Protein Sequence
(Fasta)

KSCQTASIST SEGACQAREQ VDAEVQTDPP FPVALRYASQ QDIPGLASFL RRVENLIIRE 60
LDKNWQSHAF DGFEVNWTEQ QQTVTCQHTL CYPLAQAQKL QVTSVSWNAT GSVVACSYGR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAAAGTTGCC AGACTGCCAG CATTTCCACT TCAGAAGGAG CCTGCCAAGC CCGTGAACAG 60
GTTGATGCAG AGGTACAAAC TGATCCACCT TTTCCTGTGG CCCTACGATA TGCATCCCAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005868--C:cytoplasmic dynein complex
GO:0005829--C:cytosol
GO:0060271--P:cilium assembly

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002326	Ailuropoda melanoleuca	83.97	0.00e+00	783.00
IUUC-Apl-004015	Anas platyrhynchos	69.77	0.00e+00	657.00
IUUC-Ame-010762	Astyanax mexicanus	53.89	3.00e-146	511.00
IUUC-Bta-013392	Bos taurus	81.43	0.00e+00	820.00
IUUC-Cja-019374	Callithrix jacchus	80.38	0.00e+00	763.00
IUUC-Cfa-020365	Canis familiaris	84.18	0.00e+00	764.00
IUUC-Csa-023810	Chlorocebus sabaeus	80.59	0.00e+00	801.00
IUUC-Cho-024515	Choloepus hoffmanni	81.47	2.00e-172	598.00
IUUC-Cin-025690	Ciona intestinalis	30.85	1.00e-55	210.00
IUUC-Csv-026220	Ciona savignyi	30.89	7.00e-54	204.00
IUUC-Dre-028439	Danio rerio	53.97	2.00e-147	515.00
IUUC-Dno-029916	Dasypus novemcinctus	84.81	0.00e+00	825.00
IUUC-Dor-030853	Dipodomys ordii	81.01	0.00e+00	812.00
IUUC-Eca-033204	Equus caballus	81.86	0.00e+00	787.00
IUUC-Fca-036470	Felis catus	84.57	0.00e+00	791.00
IUUC-Fal-037484	Ficedula albicollis	66.24	0.00e+00	657.00
IUUC-Gmo-039252	Gadus morhua	50.31	1.00e-136	479.00
IUUC-Gga-040701	Gallus gallus	66.95	0.00e+00	626.00
IUUC-Gac-041440	Gasterosteus aculeatus	50.42	1.00e-136	479.00
IUUC-Ggo-044509	Gorilla gorilla	81.43	0.00e+00	769.00
IUUC-Hsa-046030	Homo sapiens	81.65	0.00e+00	769.00
IUUC-Itr-048001	Ictidomys tridecemlineatus	81.86	0.00e+00	806.00
IUUC-Lch-050603	Latimeria chalumnae	61.68	2.00e-173	602.00
IUUC-Loc-052914	Lepisosteus oculatus	52.88	6.00e-130	457.00
IUUC-Laf-053957	Loxodonta africana	83.49	0.00e+00	738.00
IUUC-Mcc-054805	Macaca mulatta	80.38	0.00e+00	805.00
IUUC-Meu-056115	Macropus eugenii	98.73	0.00e+00	963.00
IUUC-Mga-059377	Meleagris gallopavo	67.58	0.00e+00	669.00
IUUC-Mmr-061203	Microcebus murinus	83.54	0.00e+00	815.00
IUUC-Mdo-062646	Monodelphis domestica	98.10	0.00e+00	933.00
IUUC-Mmu-063156	Mus musculus	80.63	0.00e+00	776.00
IUUC-Mpu-065923	Mustela putorius furo	80.41	0.00e+00	816.00
IUUC-Mlu-067705	Myotis lucifugus	83.97	0.00e+00	828.00
IUUC-Nle-069635	Nomascus leucogenys	81.84	0.00e+00	781.00
IUUC-Opr-070939	Ochotona princeps	67.01	5.00e-150	524.00
IUUC-Ont-072205	Oreochromis niloticus	50.00	8.00e-129	453.00
IUUC-Oan-073427	Ornithorhynchus anatinus	80.00	0.00e+00	724.00
IUUC-Ocu-074234	Oryctolagus cuniculus	80.80	0.00e+00	768.00
IUUC-Ola-086461	Oryzias latipes	48.96	9.00e-133	466.00
IUUC-Oga-088616	Otolemur garnettii	85.42	0.00e+00	708.00
IUUC-Ptr-090563	Pan troglodytes	81.43	0.00e+00	769.00
IUUC-Pan-092105	Papio anubis	80.59	0.00e+00	783.00
IUUC-Psi-093169	Pelodiscus sinensis	69.96	0.00e+00	700.00
IUUC-Pma-094688	Petromyzon marinus	38.16	2.00e-87	315.00
IUUC-Pfo-096136	Poecilia formosa	49.37	2.00e-120	426.00
IUUC-Pab-098286	Pongo abelii	80.17	0.00e+00	767.00
IUUC-Pca-100577	Procavia capensis	79.54	0.00e+00	738.00
IUUC-Pva-103194	Pteropus vampyrus	84.39	0.00e+00	839.00
IUUC-Rno-105958	Rattus norvegicus	79.58	0.00e+00	783.00
IUUC-Ssc-116210	Sus scrofa	79.58	0.00e+00	784.00
IUUC-Tgu-116704	Taeniopygia guttata	66.24	0.00e+00	661.00
IUUC-Tru-117530	Takifugu rubripes	47.50	2.00e-123	436.00
IUUC-Tni-120848	Tetraodon nigroviridis	44.70	4.00e-103	368.00
IUUC-Ttr-128697	Tursiops truncatus	85.68	0.00e+00	707.00
IUUC-Xtr-132843	Xenopus tropicalis	63.39	1.00e-180	625.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence