iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Stu-112186

Ensembl Protein ID

PGSC0003DMT400043505

UniProt Accession

M1BER7; M1BER7_SOLTU

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PGSC0003DMG400016890	PGSC0003DMT400043505	PGSC0003DMT400043505

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/Alpha-Helix/UIM	7.90e-06	26.6	72	88

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/Alpha-Helix/UIM

   S: 1    dEdeeLqlAlalSlqEe 17
           +Ede+L++Al++Sl++e
   Q: 72   KEDEQLARALQESLNVE 88
           69************997 PP

Organism

Solanum tuberosum

Protein Sequence
(Fasta)

MGWLNKIFKG SSHKVSEGQY DWRCEGHTEG DDPSTAEDSW SEIEEIDRAI AISLSEEEQK 60
GKVVIDSESQ LKEDEQLARA LQESLNVESP PQHVSRNDHG GGNVYGNGNF YHPVPFPYSA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTACATTCAT GTTTTCCTGC AGGTAAAAGT GTTGCCGAGA ATGAACCAAT AGCATTTCAC 60
CTCATGGGCT GGTTGAACAA AATTTTCAAA GGTTCTAGCC ATAAAGTTTC GGAAGGCCAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR022087--DA1-like
IPR003903--UIM_dom
IPR001781--Znf_LIM

PROSITE

PS00478--LIM_DOMAIN_1
PS50023--LIM_DOMAIN_2
PS50330--UIM

Pfam

PF12315--DA1-like
PF00412--LIM

SMART

SM00132--LIM
SM00726--UIM

Gene Ontology

GO:0008270--F:zinc ion binding
GO:0046621--P:negative regulation of organ growth
GO:0048482--P:plant ovule morphogenesis
GO:0048317--P:seed morphogenesis

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000888	Aegilops tauschii	69.62	0.00e+00	650.00
IUUC-Atr-002465	Amborella trichopoda	71.66	0.00e+00	708.00
IUUC-Ago-007859	Ashbya gossypii	61.11	3.40e+00	25.00
IUUC-Ame-011762	Astyanax mexicanus	26.15	2.00e-06	46.60
IUUC-Bdi-014789	Brachypodium distachyon	70.79	0.00e+00	698.00
IUUC-Bra-016788	Brassica rapa	49.16	2.00e-96	344.00
IUUC-Cpo-021667	Cavia porcellus	36.99	2.00e-08	53.10
IUUC-Dre-027455	Danio rerio	25.52	2.00e-06	47.00
IUUC-Fal-037626	Ficedula albicollis	26.38	9.00e-09	54.30
IUUC-Gmo-038981	Gadus morhua	29.17	1.00e-03	35.40
IUUC-Gga-040724	Gallus gallus	27.69	2.00e-07	50.10
IUUC-Gac-042632	Gasterosteus aculeatus	24.49	7.00e-03	33.10
IUUC-Hvu-047551	Hordeum vulgare	64.65	0.00e+00	626.00
IUUC-Lpe-050858	Leersia perrieri	68.52	0.00e+00	697.00
IUUC-Loc-052468	Lepisosteus oculatus	26.15	1.00e-06	47.40
IUUC-Mla-059141	Melampsora laricipopulina	33.96	8.00e-05	41.20
IUUC-Mvi-060250	Microbotryum violaceum	39.39	2.30e+00	27.30
IUUC-Mmr-060595	Microcebus murinus	36.36	2.00e-08	53.50
IUUC-Mac-065516	Musa acuminata	57.58	3.00e-48	182.00
IUUC-Oba-075285	Oryza barthii	72.21	0.00e+00	710.00
IUUC-Obr-076433	Oryza brachyantha	71.92	0.00e+00	708.00
IUUC-Ogl-077044	Oryza glaberrima	72.21	0.00e+00	710.00
IUUC-Ogu-078868	Oryza glumaepatula	72.21	0.00e+00	710.00
IUUC-Oin-079737	Oryza indica	73.43	0.00e+00	687.00
IUUC-Olo-080337	Oryza longistaminata	67.17	0.00e+00	702.00
IUUC-Oni-082197	Oryza nivara	72.21	0.00e+00	710.00
IUUC-Opu-083815	Oryza punctata	68.25	0.00e+00	696.00
IUUC-Oru-085246	Oryza rufipogon	72.21	0.00e+00	710.00
IUUC-Osa-086082	Oryza sativa	72.21	0.00e+00	710.00
IUUC-Ola-087406	Oryzias latipes	30.85	8.00e-08	51.20
IUUC-Olu-087728	Ostreococcus lucimarinus	34.42	2.00e-54	205.00
IUUC-Pno-094933	Phaeosphaeria nodorum	31.58	1.70e-02	33.50
IUUC-Ppa-096027	Physcomitrella patens	50.56	1.00e-131	461.00
IUUC-Pfo-097294	Poecilia formosa	25.77	1.00e-09	56.60
IUUC-Pab-098372	Pongo abelii	26.90	2.00e-06	47.40
IUUC-Pop-100076	Populus trichocarpa	72.60	0.00e+00	716.00
IUUC-Ptt-104003	Puccinia triticina	26.83	3.00e-03	35.80
IUUC-Pte-104256	Pyrenophora teres	30.38	1.00e-03	37.70
IUUC-Pyt-104720	Pyrenophora triticirepentis	31.65	7.00e-04	37.00
IUUC-Smo-108841	Selaginella moellendorffii	64.01	1.00e-141	494.00
IUUC-Sit-110147	Setaria italica	70.29	0.00e+00	703.00
IUUC-Sly-111689	Solanum lycopersicum	98.97	0.00e+00	936.00
IUUC-Sbi-114752	Sorghum bicolor	72.62	0.00e+00	716.00
IUUC-Ssc-116398	Sus scrofa	26.90	2.00e-06	47.00
IUUC-Tgu-116824	Taeniopygia guttata	26.38	1.00e-08	53.90
IUUC-Tae-125101	Triticum aestivum	68.91	0.00e+00	682.00
IUUC-Tur-126006	Triticum urartu	67.01	0.00e+00	639.00
IUUC-Tbe-127395	Tupaia belangeri	36.36	2.00e-08	52.40
IUUC-Vpa-130784	Vicugna pacos	30.83	4.00e-08	52.00
IUUC-Vvi-131286	Vitis vinifera	76.84	0.00e+00	756.00
IUUC-Xma-134125	Xiphophorus maculatus	25.77	1.00e-09	57.40

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence