iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Cgl-026583

Ensembl Protein ID

ELA35605

UniProt Accession

L2GB21; L2GB21_COLGN

Genbank Protein ID

ELA35605.1

Protein Name

Eukaryotic translation initiation factor 3 subunit I; Eukaryotic translation initiation factor 3 39 kDa subunit homolog

Genbank Nucleotide ID

KB020561

Gene Name

TIF34; CGGC5_4689

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
CGGC5_4689	ELA35605	ELA35605

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.40e-22	76.6	50	88

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           gH + ++ ++  ++ t+++sGs D+t+++WD+++g+ lk
   Q: 50   GHVGAIWTVDVdPTcTMIASGSADNTMRLWDIKSGKNLK 88
           89999****99*888*******************99887 PP

Organism

Colletotrichum gloeosporioides

Functional Description
(View)

Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.

Protein Sequence
(Fasta)

MRPILLAGHE RALTQIRYNN DGDLIFSVSK DQQICVWYAH NGERLGTYHG HVGAIWTVDV 60
DPTCTMIASG SADNTMRLWD IKSGKNLKTW EFPTAVKRVE FSEDGTKLLG VTEKRMGYLS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAGGCCCA TTCTTTTGGC AGGCCACGAG CGTGCGCTCA CCCAGATTAG GTATGTTGCG 60
CGGCGGCATC AGATTTGGAG GAGGGGGGAG GGCTTTTTCC TCATTCCTCT CGGCAAAGAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-0396--Initiation factor
KW-0648--Protein biosynthesis
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR027525--eIF3i
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0010494--C:cytoplasmic stress granule
GO:0022627--C:cytosolic small ribosomal subunit
GO:0016282--C:eukaryotic 43S preinitiation complex
GO:0033290--C:eukaryotic 48S preinitiation complex
GO:0071540--C:eukaryotic translation initiation factor 3 complex, eIF3e
GO:0071541--C:eukaryotic translation initiation factor 3 complex, eIF3m
GO:0043614--C:multi-eIF complex
GO:0034399--C:nuclear periphery
GO:0003743--F:translation initiation factor activity
GO:0071470--P:cellular response to osmotic stress
GO:0001731--P:formation of translation preinitiation complex
GO:0006446--P:regulation of translational initiation
GO:0002188--P:translation reinitiation

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000115	Aegilops tauschii	50.00	4.00e-29	120.00
IUUC-Aml-001321	Ailuropoda melanoleuca	51.38	7.00e-95	338.00
IUUC-Atr-002468	Amborella trichopoda	44.27	1.00e-44	171.00
IUUC-Apl-003841	Anas platyrhynchos	51.07	5.00e-95	338.00
IUUC-Aca-005123	Anolis carolinensis	50.61	5.00e-95	338.00
IUUC-Aly-005473	Arabidopsis lyrata	44.82	7.00e-78	281.00
IUUC-Ath-007094	Arabidopsis thaliana	44.82	4.00e-77	279.00
IUUC-Ago-008000	Ashbya gossypii	49.85	6.00e-96	342.00
IUUC-Acl-008098	Aspergillus clavatus	71.30	1.00e-144	503.00
IUUC-Afl-008494	Aspergillus flavus	71.08	2.00e-147	513.00
IUUC-Afu-009080	Aspergillus fumigatus	70.92	4.00e-145	505.00
IUUC-Ani-009230	Aspergillus nidulans	70.24	1.00e-145	506.00
IUUC-Aor-010114	Aspergillus oryzae	71.08	2.00e-147	513.00
IUUC-Ate-010285	Aspergillus terreus	72.02	1.00e-148	517.00
IUUC-Ame-011534	Astyanax mexicanus	49.24	3.00e-93	333.00
IUUC-Bgr-012121	Blumeria graminis	75.60	4.00e-151	525.00
IUUC-Bta-013143	Bos taurus	51.52	1.00e-95	340.00
IUUC-Bci-013950	Botrytis cinerea	79.70	2.00e-165	573.00
IUUC-Bdi-015019	Brachypodium distachyon	44.74	8.00e-79	285.00
IUUC-Bol-015709	Brassica oleracea	44.85	1.00e-75	275.00
IUUC-Bra-017760	Brassica rapa	44.85	4.00e-76	277.00
IUUC-Cel-018226	Caenorhabditis elegans	42.25	4.00e-75	273.00
IUUC-Cja-019741	Callithrix jacchus	51.22	2.00e-95	340.00
IUUC-Cfa-021204	Canis familiaris	51.07	2.00e-94	337.00
IUUC-Cpo-021661	Cavia porcellus	51.38	2.00e-95	340.00
IUUC-Cre-022952	Chlamydomonas reinhardtii	43.21	9.00e-74	268.00
IUUC-Csa-024038	Chlorocebus sabaeus	51.22	2.00e-95	340.00
IUUC-Cin-025597	Ciona intestinalis	47.89	2.00e-91	327.00
IUUC-Cne-026838	Cryptococcus neoformans	51.83	6.00e-98	348.00
IUUC-Cme-027304	Cyanidioschyzon merolae	38.97	2.00e-64	237.00
IUUC-Dre-028567	Danio rerio	49.70	2.00e-93	333.00
IUUC-Dno-029171	Dasypus novemcinctus	51.07	3.00e-94	337.00
IUUC-Dor-030257	Dipodomys ordii	41.24	7.00e-35	139.00
IUUC-Dse-031191	Dothistroma septosporum	73.13	2.00e-145	506.00
IUUC-Dme-031879	Drosophila melanogaster	44.34	9.00e-83	298.00
IUUC-Ete-032336	Echinops telfairi	46.54	4.00e-50	189.00
IUUC-Eca-033259	Equus caballus	51.07	1.00e-94	337.00
IUUC-Eeu-035153	Erinaceus europaeus	42.38	1.00e-27	115.00
IUUC-Fca-036489	Felis catus	51.07	1.00e-94	337.00
IUUC-Fal-037485	Ficedula albicollis	51.07	2.00e-95	340.00
IUUC-Fox-037860	Fusarium oxysporum	86.65	0.00e+00	624.00
IUUC-Fso-038188	Fusarium solani	87.54	1.00e-174	603.00
IUUC-Gmo-039311	Gadus morhua	49.54	5.00e-93	332.00
IUUC-Ggr-040045	Gaeumannomyces graminis	81.49	1.00e-170	590.00
IUUC-Gga-040645	Gallus gallus	50.30	7.00e-94	335.00
IUUC-Gac-042086	Gasterosteus aculeatus	49.39	1.00e-91	327.00
IUUC-Gma-043930	Glycine max	44.95	6.00e-78	282.00
IUUC-Ggo-045578	Gorilla gorilla	51.22	2.00e-95	340.00
IUUC-Hsa-046734	Homo sapiens	51.22	2.00e-95	340.00
IUUC-Hvu-047553	Hordeum vulgare	44.48	5.00e-78	282.00
IUUC-Itr-048467	Ictidomys tridecemlineatus	51.38	3.00e-95	339.00
IUUC-Kpa-049325	Komagataella pastoris	53.01	3.00e-102	362.00
IUUC-Lch-049620	Latimeria chalumnae	50.17	2.00e-84	303.00
IUUC-Lpe-051338	Leersia perrieri	45.37	4.00e-76	276.00
IUUC-Loc-052094	Lepisosteus oculatus	44.71	6.00e-80	288.00
IUUC-Lma-053047	Leptosphaeria maculans	74.04	2.00e-155	540.00
IUUC-Laf-053801	Loxodonta africana	51.24	7.00e-93	332.00
IUUC-Mcc-055498	Macaca mulatta	45.57	2.00e-77	280.00
IUUC-Meu-056729	Macropus eugenii	47.72	7.00e-85	305.00
IUUC-Mor-057025	Magnaporthe oryzae	80.47	1.00e-168	583.00
IUUC-Mpo-057511	Magnaporthe poae	82.99	7.00e-173	597.00
IUUC-Mtr-058051	Medicago truncatula	45.57	2.00e-77	280.00
IUUC-Mla-059061	Melampsora laricipopulina	55.42	2.00e-104	370.00
IUUC-Mga-059229	Meleagris gallopavo	50.46	7.00e-93	331.00
IUUC-Mvi-060399	Microbotryum violaceum	53.01	1.00e-100	357.00
IUUC-Mmr-060764	Microcebus murinus	51.52	4.00e-96	342.00
IUUC-Mdo-062088	Monodelphis domestica	50.61	6.00e-93	332.00
IUUC-Mmu-064304	Mus musculus	51.22	1.00e-95	341.00
IUUC-Mac-065520	Musa acuminata	44.69	6.00e-77	278.00
IUUC-Mpu-066340	Mustela putorius furo	51.07	1.00e-94	337.00
IUUC-Mlu-067111	Myotis lucifugus	51.38	3.00e-95	339.00
IUUC-Nfi-068478	Neosartorya fischeri	70.92	3.00e-145	506.00
IUUC-Ncr-068820	Neurospora crassa	84.78	3.00e-176	608.00
IUUC-Nle-069903	Nomascus leucogenys	51.07	8.00e-95	338.00
IUUC-Opr-070221	Ochotona princeps	50.61	6.00e-94	335.00
IUUC-Ont-071765	Oreochromis niloticus	49.39	3.00e-93	333.00
IUUC-Oan-073660	Ornithorhynchus anatinus	48.81	1.00e-80	290.00
IUUC-Ocu-074039	Oryctolagus cuniculus	51.07	8.00e-95	338.00
IUUC-Oba-075395	Oryza barthii	39.02	3.00e-62	229.00
IUUC-Obr-076334	Oryza brachyantha	42.68	3.00e-72	263.00
IUUC-Ogl-077060	Oryza glaberrima	44.51	5.00e-76	275.00
IUUC-Ogu-078207	Oryza glumaepatula	45.43	3.00e-80	290.00
IUUC-Oin-079878	Oryza indica	45.57	1.00e-79	287.00
IUUC-Olo-080677	Oryza longistaminata	39.01	1.00e-70	258.00
IUUC-Ome-081228	Oryza meridionalis	35.39	2.00e-32	130.00
IUUC-Oni-082411	Oryza nivara	38.18	5.00e-60	222.00
IUUC-Opu-083136	Oryza punctata	44.51	8.00e-79	285.00
IUUC-Oru-084916	Oryza rufipogon	44.48	7.00e-78	282.00
IUUC-Osa-085454	Oryza sativa	45.57	1.00e-79	287.00
IUUC-Ola-087053	Oryzias latipes	50.61	5.00e-95	338.00
IUUC-Olu-087602	Ostreococcus lucimarinus	45.99	5.00e-84	302.00
IUUC-Oga-088154	Otolemur garnettii	51.07	6.00e-95	338.00
IUUC-Oar-089915	Ovis aries	51.38	7.00e-95	338.00
IUUC-Ptr-091124	Pan troglodytes	42.41	7.00e-69	251.00
IUUC-Pan-092035	Papio anubis	51.22	2.00e-95	340.00
IUUC-Psi-094096	Pelodiscus sinensis	50.69	3.00e-59	219.00
IUUC-Pno-094988	Phaeosphaeria nodorum	68.44	3.00e-134	469.00
IUUC-Ppa-095536	Physcomitrella patens	47.99	3.00e-82	296.00
IUUC-Pfo-096101	Poecilia formosa	50.30	3.00e-94	336.00
IUUC-Pab-097726	Pongo abelii	51.22	2.00e-95	340.00
IUUC-Pop-099617	Populus trichocarpa	44.92	1.00e-79	287.00
IUUC-Pca-101014	Procavia capensis	51.52	6.00e-96	342.00
IUUC-Ppe-101320	Prunus persica	43.69	1.00e-75	274.00
IUUC-Pva-102789	Pteropus vampyrus	45.57	1.00e-80	291.00
IUUC-Pgr-103479	Puccinia graminis	54.80	3.00e-103	366.00
IUUC-Ptt-103981	Puccinia triticina	54.18	5.00e-102	362.00
IUUC-Pte-104278	Pyrenophora teres	74.10	3.00e-149	519.00
IUUC-Pyt-104492	Pyrenophora triticirepentis	74.10	3.00e-149	519.00
IUUC-Rno-105867	Rattus norvegicus	45.54	8.00e-77	278.00
IUUC-Sce-106251	Saccharomyces cerevisiae	50.88	2.00e-99	353.00
IUUC-Sha-107039	Sarcophilus harrisii	50.46	4.00e-93	332.00
IUUC-Sja-107758	Schizosaccharomyces japonicus	62.80	2.00e-127	446.00
IUUC-Spo-108314	Schizosaccharomyces pombe	63.22	2.00e-127	446.00
IUUC-Ssl-108478	Sclerotinia sclerotiorum	79.40	6.00e-165	571.00
IUUC-Smo-108728	Selaginella moellendorffii	42.41	6.00e-76	275.00
IUUC-Sit-110801	Setaria italica	44.65	3.00e-80	290.00
IUUC-Sly-111326	Solanum lycopersicum	45.71	2.00e-79	287.00
IUUC-Stu-112458	Solanum tuberosum	45.71	1.00e-78	285.00
IUUC-Sbi-114063	Sorghum bicolor	44.62	2.00e-79	286.00
IUUC-Sre-115096	Sporisorium reilianum	57.23	7.00e-103	365.00
IUUC-Ssc-116080	Sus scrofa	51.52	1.00e-95	341.00
IUUC-Tgu-116988	Taeniopygia guttata	50.76	7.00e-95	338.00
IUUC-Tru-118766	Takifugu rubripes	49.70	1.00e-93	334.00
IUUC-Tni-120197	Tetraodon nigroviridis	50.30	8.00e-95	338.00
IUUC-Tca-121316	Theobroma cacao	44.95	5.00e-78	282.00
IUUC-Tre-122097	Trichoderma reesei	84.57	5.00e-176	608.00
IUUC-Tvi-122442	Trichoderma virens	84.78	1.00e-175	606.00
IUUC-Tae-125800	Triticum aestivum	44.17	2.00e-77	281.00
IUUC-Tur-126334	Triticum urartu	37.42	1.00e-58	218.00
IUUC-Tme-127038	Tuber melanosporum	69.88	4.00e-143	498.00
IUUC-Ttr-128659	Tursiops truncatus	47.40	1.00e-75	274.00
IUUC-Uma-129464	Ustilago maydis	57.23	4.00e-102	362.00
IUUC-Vda-129841	Verticillium dahliae	92.17	0.00e+00	644.00
IUUC-Vvi-131076	Vitis vinifera	44.48	2.00e-77	280.00
IUUC-Xtr-132395	Xenopus tropicalis	52.91	9.00e-98	348.00
IUUC-Xma-133383	Xiphophorus maculatus	50.30	4.00e-94	336.00
IUUC-Yli-134586	Yarrowia lipolytica	60.84	9.00e-112	394.00
IUUC-Zma-135904	Zea mays	45.54	2.00e-80	290.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence