iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Smo-108766

Ensembl Protein ID

EFJ17349

UniProt Accession

D8SE11; D8SE11_SELML

Genbank Protein ID

EFJ17349.1

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

GL377614

Gene Name

SELMODRAFT_114814

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SELMODRAFT_114814	EFJ17349	EFJ17349

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.40e-10	41.7	405	436

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 5    svtclaf..sd..tllvsGsdDgtikvWDlrt 32
           s+ cla   s+    l+sGs Dg++ +WD+  
   Q: 405  SIQCLAVhqSEsrQVLLSGSMDGSVCLWDIEA 436
           6889988884444779*************765 PP

Organism

Selaginella moellendorffii

Protein Sequence
(Fasta)

MKLEVSQGLW ASNTFAHDVR VALVLDKPAT IWTGAADGKI FLWSFDSRSS SKDVLPLALL 60
CGHTAAIVGL QACDRSQSQS QGGVLSVCSE RGMCVWDSDT GKCLRRRRLP PSIAQPTSVS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAAGCTAG AAGTTTCGCA AGGCTTGTGG GCATCCAACA CCTTTGCGCA CGATGTCCGA 60
GTGGCGCTTG TTCTGGACAA GCCTGCGACA ATCTGGACTG GAGCTGCCGA TGGCAAGATT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011047--Quinoprotein_ADH-like_supfam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

KEGG

smo:SELMODRAFT_114814

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001970	Ailuropoda melanoleuca	24.92	2.00e-12	67.40
IUUC-Atr-002981	Amborella trichopoda	34.55	6.00e-138	484.00
IUUC-Apl-003551	Anas platyrhynchos	23.46	8.00e-21	95.50
IUUC-Aca-004824	Anolis carolinensis	24.29	2.00e-17	84.70
IUUC-Aly-005882	Arabidopsis lyrata	30.60	5.00e-157	548.00
IUUC-Ath-006797	Arabidopsis thaliana	31.57	1.00e-157	550.00
IUUC-Ame-011180	Astyanax mexicanus	27.06	3.00e-12	67.40
IUUC-Bol-016538	Brassica oleracea	30.46	5.00e-147	515.00
IUUC-Bra-018098	Brassica rapa	29.18	3.00e-80	292.00
IUUC-Cel-018565	Caenorhabditis elegans	30.53	1.00e-10	62.00
IUUC-Cho-024612	Choloepus hoffmanni	31.08	5.00e-11	63.50
IUUC-Cin-025255	Ciona intestinalis	20.62	2.00e-14	74.70
IUUC-Csv-026361	Ciona savignyi	20.77	2.00e-14	74.70
IUUC-Dor-030771	Dipodomys ordii	22.12	1.00e-15	79.00
IUUC-Dme-031768	Drosophila melanogaster	29.93	1.00e-13	72.00
IUUC-Ete-032492	Echinops telfairi	26.51	3.00e-12	67.40
IUUC-Gmo-039528	Gadus morhua	27.91	2.00e-12	68.20
IUUC-Gga-041043	Gallus gallus	23.38	3.00e-22	100.00
IUUC-Gac-042524	Gasterosteus aculeatus	27.91	2.00e-12	68.20
IUUC-Itr-048340	Ictidomys tridecemlineatus	26.51	8.00e-13	67.40
IUUC-Lch-049569	Latimeria chalumnae	21.77	9.00e-19	88.60
IUUC-Mmr-061271	Microcebus murinus	26.51	2.00e-12	68.20
IUUC-Mmu-063262	Mus musculus	26.98	1.00e-12	68.90
IUUC-Mlu-067288	Myotis lucifugus	23.44	3.00e-22	100.00
IUUC-Ont-072199	Oreochromis niloticus	27.44	9.00e-12	65.90
IUUC-Ola-087177	Oryzias latipes	27.44	6.00e-12	66.20
IUUC-Sit-110049	Setaria italica	30.00	3.00e-48	186.00
IUUC-Tgu-117297	Taeniopygia guttata	22.56	1.00e-18	89.00
IUUC-Tsy-118970	Tarsius syrichta	26.51	2.00e-12	68.20
IUUC-Tni-119791	Tetraodon nigroviridis	27.44	7.00e-12	65.10

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence