iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sbi-114407

Ensembl Protein ID

Sb01g008480.1

UniProt Accession

C5Z353; C5Z353_SORBI

Genbank Protein ID

EER89802.1

Protein Name

Auxin-responsive protein

Genbank Nucleotide ID

CM000769

Gene Name

SORBI_010G146400

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb01g008480	Sb01g008480.1	Sb01g008480.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UDP/UFD/PB1	8.70e-16	58.7	126	216

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UFD/PB1

   S: 3    rvkvsykgeirsfaldlekpgkfedLlkavrt..lt...............elknsevalkYeDedGDlvtlksDedldkavsllaskksllrlli 81
           +vkvs++g+++++++dl+ + +++dL  a+++   t                +++ +v  +YeD+dGD++ l++D++++++v+      s++rl+i
   Q: 126  FVKVSMDGAPYLRKVDLKMYNSYKDLSIALKKmfSTfttsgnnmnegklvdPVSGADVVTTYEDKDGDWM-LVGDVPWEMFVE------SCKRLRI 214
           8*******************************76115689999*****9999999***************.************......******* PP
   S: 82   qk 83
           +k
   Q: 215  MK 216
           97 PP

Organism

Sorghum bicolor

Functional Description
(View)

Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.

Protein Sequence
(Fasta)

MAGADVDVGT ELRLGLPGGG AEAAKAAKRG FEDTIDLKLK LPTAGMEEAA AAKPEPAAEK 60
AKRPAEAPAA DAEKPPAPKA QAVGWPPVRS YRRNVMTVQS VKSKKEEEPE KQQSAAANAS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCTCTAAC TAACTGCTAT CGTAAGTTGC AACCCCACTT CCATCTCCCT CTCTCTCTCT 60
CTCTCTCTCT CTCTCTCTCT CTCTCTCTCT CTCTCTCTCT CTCTCTCTCT CCTCCTGCCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0927--Auxin signaling pathway
KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0678--Repressor
KW-0804--Transcription
KW-0805--Transcription regulation

Interpro

IPR033389--AUX/IAA_dom
IPR003311--AUX_IAA
IPR000270--PB1_dom

PROSITE

PS51745--PB1

Pfam

PF02309--AUX_IAA

Gene Ontology

GO:0005634--C:nucleus
GO:0009734--P:auxin-activated signaling pathway
GO:0006355--P:regulation of transcription, DNA-templated
GO:0006351--P:transcription, DNA-templated

KEGG

sbi:SORBI_10g019590

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000264	Aegilops tauschii	83.23	7.00e-65	238.00
IUUC-Bdi-014647	Brachypodium distachyon	76.17	1.00e-69	254.00
IUUC-Fso-038325	Fusarium solani	30.65	6.00e-01	29.60
IUUC-Hvu-047332	Hordeum vulgare	83.90	6.00e-71	259.00
IUUC-Loc-051887	Lepisosteus oculatus	31.43	6.40e-02	30.80
IUUC-Obr-076428	Oryza brachyantha	78.54	5.00e-63	233.00
IUUC-Ogl-077356	Oryza glaberrima	70.66	2.00e-63	234.00
IUUC-Ogu-078777	Oryza glumaepatula	71.90	8.00e-64	235.00
IUUC-Oin-079778	Oryza indica	70.66	2.00e-63	234.00
IUUC-Ome-081785	Oryza meridionalis	66.27	3.00e-59	220.00
IUUC-Oni-082706	Oryza nivara	71.07	6.00e-64	236.00
IUUC-Opu-083338	Oryza punctata	78.84	8.00e-66	242.00
IUUC-Oru-084731	Oryza rufipogon	70.66	2.00e-63	234.00
IUUC-Osa-085413	Oryza sativa	70.66	2.00e-63	234.00
IUUC-Ola-086919	Oryzias latipes	26.32	1.30e+00	27.30
IUUC-Sit-109721	Setaria italica	94.89	1.00e-77	281.00
IUUC-Tae-124410	Triticum aestivum	83.83	3.00e-72	263.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence