iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pab-098306

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

ABGA01207746

Gene Name

NUP43

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSPPYG00000017092.1	ENSPPYT00000019892.1	ENSPPYP00000019137.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.60e-16	59.8	325	364

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sd.tllvsGsdDgtikvWDlrtgvllks 38
           H+++++ ++f  s+ ++l ++s Dg++  W+ +t+v++ks
   Q: 325  HEAEMWEVHFhpSNpDHLFTCSEDGSLWHWNASTDVPEKS 364
           99999******8778*****************99999876 PP

Organism

Pongo abelii

Protein Sequence
(Fasta)

MGRPLRLDSP SLRTDCAHTG YRELTLCSHR IPPKVPSNQG SAGRGGAERR ALCLLFAVPA 60
AAAFGMEEIY AKFVSQKISK TRWRPLPPGS LQTAETFATG SWDNEENYVS LWSIGDFGNL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGGAGGC CTCTCCGTCT AGATTCTCCC AGTTTGCGTA CTGACTGTGC CCACACTGGC 60
TACCGATGAG AATTGACTCT CTGCAGCCAC CGTATCCCTC CTAAAGTCCC ATCCAATCAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

SMART

SM00320--WD40

Gene Ontology

GO:0000776--C:kinetochore
GO:0031080--C:nuclear pore outer ring

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001593	Ailuropoda melanoleuca	94.47	0.00e+00	722.00
IUUC-Atr-002526	Amborella trichopoda	24.78	9.00e-11	60.80
IUUC-Apl-003533	Anas platyrhynchos	75.52	1.00e-143	502.00
IUUC-Aca-004965	Anolis carolinensis	71.84	9.00e-165	572.00
IUUC-Aly-006431	Arabidopsis lyrata	30.18	8.00e-14	71.20
IUUC-Ath-007253	Arabidopsis thaliana	30.36	8.00e-14	71.20
IUUC-Ame-011694	Astyanax mexicanus	64.17	4.00e-123	433.00
IUUC-Bta-013161	Bos taurus	94.74	0.00e+00	754.00
IUUC-Bdi-014758	Brachypodium distachyon	26.32	7.00e-13	67.80
IUUC-Bol-016489	Brassica oleracea	27.27	2.00e-07	51.20
IUUC-Bra-017838	Brassica rapa	27.27	3.00e-08	52.80
IUUC-Cel-018567	Caenorhabditis elegans	29.71	4.00e-09	55.80
IUUC-Cja-020000	Callithrix jacchus	84.24	0.00e+00	654.00
IUUC-Cfa-021112	Canis familiaris	95.00	0.00e+00	757.00
IUUC-Cpo-022095	Cavia porcellus	90.53	0.00e+00	713.00
IUUC-Csa-023460	Chlorocebus sabaeus	98.42	0.00e+00	753.00
IUUC-Cho-024279	Choloepus hoffmanni	93.53	8.00e-180	622.00
IUUC-Cin-025360	Ciona intestinalis	35.42	1.00e-60	226.00
IUUC-Csv-026301	Ciona savignyi	37.21	6.00e-53	200.00
IUUC-Dre-028097	Danio rerio	62.17	1.00e-136	479.00
IUUC-Dno-029131	Dasypus novemcinctus	93.68	0.00e+00	741.00
IUUC-Dor-030496	Dipodomys ordii	79.57	0.00e+00	674.00
IUUC-Dme-031834	Drosophila melanogaster	26.60	2.00e-42	166.00
IUUC-Ete-032448	Echinops telfairi	86.17	2.00e-178	618.00
IUUC-Eca-034409	Equus caballus	94.21	0.00e+00	742.00
IUUC-Eeu-035343	Erinaceus europaeus	77.07	4.00e-164	570.00
IUUC-Fca-036177	Felis catus	96.32	0.00e+00	764.00
IUUC-Fal-037657	Ficedula albicollis	70.79	3.00e-157	547.00
IUUC-Gmo-038946	Gadus morhua	65.96	2.00e-142	498.00
IUUC-Gga-041070	Gallus gallus	74.21	5.00e-162	563.00
IUUC-Gac-042442	Gasterosteus aculeatus	65.73	8.00e-148	516.00
IUUC-Gma-043812	Glycine max	26.84	3.00e-12	65.90
IUUC-Ggo-045223	Gorilla gorilla	98.16	0.00e+00	778.00
IUUC-Hsa-045956	Homo sapiens	98.42	0.00e+00	781.00
IUUC-Itr-048116	Ictidomys tridecemlineatus	96.33	0.00e+00	765.00
IUUC-Lch-050035	Latimeria chalumnae	71.16	1.00e-161	561.00
IUUC-Laf-053404	Loxodonta africana	91.32	0.00e+00	718.00
IUUC-Mcc-055813	Macaca mulatta	98.42	0.00e+00	752.00
IUUC-Meu-056388	Macropus eugenii	75.95	6.00e-161	560.00
IUUC-Mga-060193	Meleagris gallopavo	72.89	6.00e-169	586.00
IUUC-Mmr-060818	Microcebus murinus	95.26	0.00e+00	757.00
IUUC-Mdo-062822	Monodelphis domestica	89.21	0.00e+00	707.00
IUUC-Mmu-064182	Mus musculus	93.68	0.00e+00	746.00
IUUC-Mac-065317	Musa acuminata	25.00	3.00e-08	52.80
IUUC-Mpu-066865	Mustela putorius furo	95.29	0.00e+00	673.00
IUUC-Mlu-067329	Myotis lucifugus	93.42	0.00e+00	702.00
IUUC-Nle-069093	Nomascus leucogenys	98.68	0.00e+00	781.00
IUUC-Opr-070481	Ochotona princeps	82.14	0.00e+00	706.00
IUUC-Ont-072445	Oreochromis niloticus	67.37	7.00e-149	519.00
IUUC-Oan-073029	Ornithorhynchus anatinus	77.11	1.00e-173	602.00
IUUC-Ocu-074275	Oryctolagus cuniculus	93.68	0.00e+00	747.00
IUUC-Ola-086862	Oryzias latipes	63.35	8.00e-135	473.00
IUUC-Oga-088952	Otolemur garnettii	96.57	0.00e+00	766.00
IUUC-Oar-089300	Ovis aries	95.53	0.00e+00	759.00
IUUC-Ptr-091389	Pan troglodytes	98.68	0.00e+00	782.00
IUUC-Pan-092174	Papio anubis	98.68	0.00e+00	754.00
IUUC-Psi-093326	Pelodiscus sinensis	78.59	2.00e-164	571.00
IUUC-Pfo-096331	Poecilia formosa	65.68	4.00e-145	507.00
IUUC-Pop-099166	Populus trichocarpa	30.50	6.00e-11	61.60
IUUC-Pca-100455	Procavia capensis	91.33	5.00e-81	294.00
IUUC-Ppe-101380	Prunus persica	29.32	1.00e-12	67.00
IUUC-Pva-102578	Pteropus vampyrus	91.75	0.00e+00	767.00
IUUC-Rno-105146	Rattus norvegicus	92.63	0.00e+00	709.00
IUUC-Sha-107640	Sarcophilus harrisii	90.29	0.00e+00	719.00
IUUC-Sly-111767	Solanum lycopersicum	28.74	6.00e-10	58.20
IUUC-Stu-112515	Solanum tuberosum	28.74	7.00e-10	58.20
IUUC-Sar-113681	Sorex araneus	94.39	1.00e-109	389.00
IUUC-Sbi-113809	Sorghum bicolor	25.79	6.00e-07	48.10
IUUC-Ssc-116129	Sus scrofa	94.74	0.00e+00	728.00
IUUC-Tgu-117456	Taeniopygia guttata	70.42	3.00e-82	297.00
IUUC-Tru-117630	Takifugu rubripes	68.15	7.00e-100	356.00
IUUC-Tsy-119331	Tarsius syrichta	89.93	0.00e+00	788.00
IUUC-Tni-120077	Tetraodon nigroviridis	64.29	2.00e-135	474.00
IUUC-Tca-121814	Theobroma cacao	28.41	4.00e-10	58.90
IUUC-Tae-123605	Triticum aestivum	27.37	9.00e-13	67.80
IUUC-Tbe-127359	Tupaia belangeri	86.74	0.00e+00	664.00
IUUC-Ttr-128461	Tursiops truncatus	92.34	0.00e+00	788.00
IUUC-Vpa-130162	Vicugna pacos	90.77	0.00e+00	779.00
IUUC-Vvi-131114	Vitis vinifera	28.73	3.00e-12	65.90
IUUC-Xtr-132446	Xenopus tropicalis	68.87	7.00e-156	543.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence