iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Pop-099166

Ensembl Protein ID

POPTR_0006s19400.1

UniProt Accession

B9HBE9; B9HBE9_POPTR

Genbank Protein ID

EEE92891.2

Protein Name

WD-40 repeat family protein

Genbank Nucleotide ID

CM000342

Gene Name

POPTRDRAFT_802207; POPTR_0006s19400g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0006s19400	POPTR_0006s19400.1	POPTR_0006s19400.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 adaptor/Cullin RING/DCX/DWD	30.50	2.00e-09	61.60	IUUC-Hsa-045956

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MARTNLTEPP KIHRIPQPKF IDAIRWLPSP SPFRKSFITS LFDSDFHTPS LEIHSLDPSK 60
TLTTPLLSWT PPSRISSLKS TPSLFAASTF LGSLHIFKTP EEMSVLGNDM SGLGGETSVM 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAAGAGTTGA TTATATGACC TGAGAAGCAG AAAAACCCCC ACGCCACAGA CACTTCACTT 60
TGCACTGTAT TTTTTTGAAT TGAAACACAA AAACCCTAAG AATGGCAAGA ACAAACCTTA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR017986--WD40_repeat_dom

Gene Ontology

GO:0009507--C:chloroplast
GO:0031080--C:nuclear pore outer ring

KEGG

pop:POPTR_0006s19400g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002526	Amborella trichopoda	47.04	1.00e-85	309.00
IUUC-Aly-006431	Arabidopsis lyrata	58.93	1.00e-119	422.00
IUUC-Ath-007253	Arabidopsis thaliana	58.92	3.00e-119	421.00
IUUC-Ame-011694	Astyanax mexicanus	31.91	7.00e-12	63.90
IUUC-Bdi-014758	Brachypodium distachyon	48.19	4.00e-82	297.00
IUUC-Bol-016489	Brassica oleracea	57.39	2.00e-93	336.00
IUUC-Bra-017838	Brassica rapa	58.03	2.00e-103	368.00
IUUC-Cpo-022095	Cavia porcellus	31.36	2.00e-12	65.90
IUUC-Cre-022610	Chlamydomonas reinhardtii	34.17	4.00e-10	58.50
IUUC-Csa-023460	Chlorocebus sabaeus	29.59	4.00e-11	61.60
IUUC-Cho-024279	Choloepus hoffmanni	30.50	4.00e-11	61.60
IUUC-Cin-025360	Ciona intestinalis	23.20	3.00e-12	65.50
IUUC-Csv-026301	Ciona savignyi	27.56	2.00e-11	62.00
IUUC-Dre-028097	Danio rerio	31.21	4.00e-11	61.60
IUUC-Dno-029131	Dasypus novemcinctus	30.18	1.00e-11	63.20
IUUC-Gmo-038946	Gadus morhua	29.08	6.00e-10	58.20
IUUC-Gac-042442	Gasterosteus aculeatus	29.79	1.00e-10	60.50
IUUC-Gma-043812	Glycine max	57.82	9.00e-105	372.00
IUUC-Hsa-045956	Homo sapiens	29.59	3.00e-11	62.00
IUUC-Itr-048116	Ictidomys tridecemlineatus	29.76	1.00e-11	63.50
IUUC-Laf-053404	Loxodonta africana	30.18	5.00e-12	65.10
IUUC-Mcc-055813	Macaca mulatta	29.59	5.00e-11	61.60
IUUC-Mmr-060818	Microcebus murinus	29.24	8.00e-11	60.80
IUUC-Mdo-062822	Monodelphis domestica	26.16	2.00e-12	66.60
IUUC-Mmu-064182	Mus musculus	30.77	8.00e-12	64.30
IUUC-Mac-065317	Musa acuminata	46.15	8.00e-69	253.00
IUUC-Mlu-067329	Myotis lucifugus	29.59	8.00e-11	60.80
IUUC-Ont-072445	Oreochromis niloticus	29.08	1.00e-10	60.50
IUUC-Oan-073029	Ornithorhynchus anatinus	29.59	5.00e-11	61.60
IUUC-Ocu-074275	Oryctolagus cuniculus	29.59	4.00e-11	62.00
IUUC-Ola-086862	Oryzias latipes	30.50	5.00e-08	51.60
IUUC-Oga-088952	Otolemur garnettii	29.59	4.00e-11	61.60
IUUC-Oar-089300	Ovis aries	29.59	6.00e-11	61.20
IUUC-Ptr-091389	Pan troglodytes	29.59	3.00e-11	62.00
IUUC-Pan-092008	Papio anubis	28.40	3.00e-11	62.00
IUUC-Pfo-096331	Poecilia formosa	29.79	2.00e-10	59.30
IUUC-Pab-098306	Pongo abelii	29.59	4.00e-11	62.40
IUUC-Ppe-101380	Prunus persica	59.02	2.00e-118	418.00
IUUC-Rno-105146	Rattus norvegicus	30.77	7.00e-12	64.30
IUUC-Sha-107640	Sarcophilus harrisii	26.69	1.00e-12	67.00
IUUC-Sly-111767	Solanum lycopersicum	59.67	7.00e-111	392.00
IUUC-Stu-112515	Solanum tuberosum	59.67	3.00e-112	397.00
IUUC-Sbi-113809	Sorghum bicolor	57.81	1.00e-65	242.00
IUUC-Ssc-116129	Sus scrofa	28.65	6.00e-11	61.20
IUUC-Tgu-117456	Taeniopygia guttata	36.07	1.00e-03	35.80
IUUC-Tru-117630	Takifugu rubripes	30.50	3.00e-12	64.70
IUUC-Tsy-119331	Tarsius syrichta	28.99	1.00e-10	60.80
IUUC-Tca-121814	Theobroma cacao	63.13	8.00e-121	426.00
IUUC-Tae-123605	Triticum aestivum	49.86	2.00e-84	305.00
IUUC-Tbe-127359	Tupaia belangeri	32.20	6.00e-10	57.80
IUUC-Vvi-131114	Vitis vinifera	59.19	5.00e-114	403.00
IUUC-Xtr-132446	Xenopus tropicalis	28.28	7.00e-11	60.80

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence