iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

iUUCD ID

IUUC-Spo-108324

Ensembl Protein ID

SPCC18B5.10c.1:pep

UniProt Accession

Q9USL1; YJKA_SCHPO

Genbank Protein ID

CAB52157.1

Protein Name

Uncharacterized WD repeat-containing protein C18B5.10c

Genbank Nucleotide ID

CU329672

Gene Name

SPCC18B5.10c

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SPCC18B5.10c	SPCC18B5.10c.1	SPCC18B5.10c.1:pep

Annotation

mRNA Expression
GEO
Protein Expression/Proteomics

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.50e-15	54.1	22	52

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWD 29
           g+++++++l +  s+ +l+s+s  g++ vW+
   Q: 22   GQQGPIRSLGWnlSGSRLASSSSSGSVLVWN 52
           67899*******87689*************9 PP

Organism

Schizosaccharomyces pombe

Protein Sequence
(Fasta)

MCASVTESLP KFPELKTRDL QGQQGPIRSL GWNLSGSRLA SSSSSGSVLV WNSDRLDFKF 60
TTELGNRGYG LVEQLVWDPT HSDRLMAVYA GKMIRFWDFR SAKPIAEIES NYENIYATWS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTGTGCTT CAGTTACAGA ATCGCTTGTA TGTTAATGAT TTATAAAAAC TAGAGCATAA 60
AATACTAAAA CTTTCTTTTT TCTTTTTAGC CAAAGTTTCC CGAATTGAAA ACTCGAGATT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR013979--TIF_beta_prop-like
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08662--eIF2A
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0000445--C:THO complex part of transcription export complex
GO:0000346--C:transcription export complex
GO:0006406--P:mRNA export from nucleus

KEGG

spo:SPCC18B5.10c

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000099	Aegilops tauschii	36.08	1.00e-55	208.00
IUUC-Aml-001264	Ailuropoda melanoleuca	38.69	6.00e-62	229.00
IUUC-Atr-003050	Amborella trichopoda	35.86	3.00e-60	223.00
IUUC-Apl-003426	Anas platyrhynchos	37.60	9.00e-50	187.00
IUUC-Aca-004931	Anolis carolinensis	41.95	5.00e-50	188.00
IUUC-Aly-006237	Arabidopsis lyrata	36.77	2.00e-62	230.00
IUUC-Ath-007581	Arabidopsis thaliana	36.77	1.00e-62	231.00
IUUC-Acl-008253	Aspergillus clavatus	29.75	6.00e-40	155.00
IUUC-Afl-008519	Aspergillus flavus	30.21	5.00e-40	156.00
IUUC-Afu-008886	Aspergillus fumigatus	29.92	1.00e-37	148.00
IUUC-Ani-009275	Aspergillus nidulans	29.57	4.00e-39	153.00
IUUC-Ang-009862	Aspergillus niger	30.90	5.00e-39	152.00
IUUC-Ate-010247	Aspergillus terreus	28.16	3.00e-36	143.00
IUUC-Ame-010828	Astyanax mexicanus	39.02	1.00e-62	231.00
IUUC-Bgr-012163	Blumeria graminis	32.20	2.00e-35	140.00
IUUC-Bta-013514	Bos taurus	35.74	1.00e-53	201.00
IUUC-Bci-013639	Botrytis cinerea	31.11	3.00e-46	176.00
IUUC-Bdi-015049	Brachypodium distachyon	34.62	1.00e-53	201.00
IUUC-Bol-015401	Brassica oleracea	38.05	6.00e-59	219.00
IUUC-Bra-017867	Brassica rapa	38.05	4.00e-59	219.00
IUUC-Cel-018699	Caenorhabditis elegans	30.70	2.00e-36	144.00
IUUC-Cja-019591	Callithrix jacchus	38.36	1.00e-61	228.00
IUUC-Cfa-020692	Canis familiaris	38.69	4.00e-62	229.00
IUUC-Cpo-022135	Cavia porcellus	40.85	1.00e-52	197.00
IUUC-Cre-022572	Chlamydomonas reinhardtii	31.10	4.00e-31	126.00
IUUC-Csa-023408	Chlorocebus sabaeus	38.69	6.00e-62	229.00
IUUC-Cho-024340	Choloepus hoffmanni	45.91	3.00e-42	162.00
IUUC-Cin-025418	Ciona intestinalis	41.22	2.00e-31	125.00
IUUC-Csv-026130	Ciona savignyi	37.33	3.00e-61	226.00
IUUC-Cgl-026744	Colletotrichum gloeosporioides	30.85	7.00e-42	162.00
IUUC-Cne-026775	Cryptococcus neoformans	35.14	2.00e-17	82.00
IUUC-Dre-028634	Danio rerio	39.02	2.00e-62	230.00
IUUC-Dno-029449	Dasypus novemcinctus	38.69	5.00e-62	229.00
IUUC-Dor-030301	Dipodomys ordii	46.45	8.00e-41	158.00
IUUC-Dse-031341	Dothistroma septosporum	30.87	3.00e-34	137.00
IUUC-Dme-031674	Drosophila melanogaster	38.21	5.00e-57	212.00
IUUC-Ete-033136	Echinops telfairi	38.36	3.00e-62	229.00
IUUC-Eca-034432	Equus caballus	38.36	9.00e-62	228.00
IUUC-Fca-035694	Felis catus	38.69	4.00e-62	229.00
IUUC-Fal-037328	Ficedula albicollis	37.38	1.00e-60	224.00
IUUC-Fox-037894	Fusarium oxysporum	29.79	1.00e-42	164.00
IUUC-Fso-038266	Fusarium solani	28.57	5.00e-38	149.00
IUUC-Gmo-039617	Gadus morhua	38.69	2.00e-62	230.00
IUUC-Ggr-039819	Gaeumannomyces graminis	30.26	1.00e-37	148.00
IUUC-Gga-040172	Gallus gallus	41.02	1.00e-59	221.00
IUUC-Gac-042407	Gasterosteus aculeatus	38.03	9.00e-62	228.00
IUUC-Gma-043718	Glycine max	34.30	2.00e-57	213.00
IUUC-Ggo-044989	Gorilla gorilla	38.69	4.00e-62	229.00
IUUC-Hsa-046784	Homo sapiens	38.69	6.00e-62	229.00
IUUC-Hvu-047633	Hordeum vulgare	36.11	9.00e-45	171.00
IUUC-Itr-048184	Ictidomys tridecemlineatus	27.08	4.00e-25	106.00
IUUC-Lch-049894	Latimeria chalumnae	38.69	2.00e-62	230.00
IUUC-Lpe-051061	Leersia perrieri	32.14	8.00e-41	158.00
IUUC-Loc-052424	Lepisosteus oculatus	39.02	3.00e-63	233.00
IUUC-Lma-053127	Leptosphaeria maculans	33.44	2.00e-50	192.00
IUUC-Laf-053396	Loxodonta africana	39.02	2.00e-62	230.00
IUUC-Mcc-055517	Macaca mulatta	38.69	5.00e-62	229.00
IUUC-Meu-056034	Macropus eugenii	38.69	3.00e-62	229.00
IUUC-Mor-057011	Magnaporthe oryzae	28.42	8.00e-24	102.00
IUUC-Mpo-057490	Magnaporthe poae	30.26	2.00e-37	147.00
IUUC-Mtr-057927	Medicago truncatula	34.87	2.00e-57	213.00
IUUC-Mla-058945	Melampsora laricipopulina	33.10	4.00e-40	155.00
IUUC-Mga-060155	Meleagris gallopavo	41.03	3.00e-52	196.00
IUUC-Mvi-060344	Microbotryum violaceum	33.77	2.00e-41	160.00
IUUC-Mmr-060834	Microcebus murinus	39.34	4.00e-63	232.00
IUUC-Mdo-062587	Monodelphis domestica	38.69	2.00e-62	230.00
IUUC-Mmu-063395	Mus musculus	38.69	6.00e-62	229.00
IUUC-Mac-064579	Musa acuminata	35.60	2.00e-60	223.00
IUUC-Mpu-066688	Mustela putorius furo	39.30	3.00e-54	203.00
IUUC-Mlu-067299	Myotis lucifugus	38.69	3.00e-62	230.00
IUUC-Nfi-068562	Neosartorya fischeri	29.75	1.00e-38	151.00
IUUC-Ncr-068654	Neurospora crassa	29.33	4.00e-37	146.00
IUUC-Nle-069736	Nomascus leucogenys	38.36	9.00e-61	225.00
IUUC-Ont-071763	Oreochromis niloticus	38.69	1.00e-62	231.00
IUUC-Ocu-074909	Oryctolagus cuniculus	38.69	5.00e-62	229.00
IUUC-Oba-075902	Oryza barthii	31.82	7.00e-40	155.00
IUUC-Obr-076613	Oryza brachyantha	35.39	1.00e-53	201.00
IUUC-Ogl-077009	Oryza glaberrima	35.71	7.00e-54	202.00
IUUC-Ogu-078344	Oryza glumaepatula	31.82	7.00e-40	155.00
IUUC-Oin-079773	Oryza indica	35.71	7.00e-54	202.00
IUUC-Olo-080474	Oryza longistaminata	33.83	4.00e-27	112.00
IUUC-Oni-082263	Oryza nivara	31.82	7.00e-40	155.00
IUUC-Opu-083813	Oryza punctata	35.71	2.00e-54	203.00
IUUC-Oru-084610	Oryza rufipogon	31.82	8.00e-40	155.00
IUUC-Osa-085415	Oryza sativa	35.71	7.00e-54	202.00
IUUC-Ola-086659	Oryzias latipes	38.36	3.00e-62	229.00
IUUC-Olu-087649	Ostreococcus lucimarinus	37.71	2.00e-45	173.00
IUUC-Oga-087923	Otolemur garnettii	38.69	5.00e-62	229.00
IUUC-Oar-089688	Ovis aries	39.60	3.00e-61	226.00
IUUC-Ptr-091628	Pan troglodytes	38.69	6.00e-62	229.00
IUUC-Pan-092586	Papio anubis	38.31	2.00e-60	224.00
IUUC-Psi-093701	Pelodiscus sinensis	44.09	4.00e-49	185.00
IUUC-Pma-094465	Petromyzon marinus	36.72	8.00e-60	221.00
IUUC-Pno-094767	Phaeosphaeria nodorum	35.36	3.00e-49	187.00
IUUC-Ppa-095195	Physcomitrella patens	37.59	1.00e-62	231.00
IUUC-Pfo-097383	Poecilia formosa	38.03	1.00e-61	228.00
IUUC-Pab-098669	Pongo abelii	38.69	5.00e-62	229.00
IUUC-Pop-099409	Populus trichocarpa	34.95	5.00e-59	219.00
IUUC-Pca-100769	Procavia capensis	35.08	5.00e-48	182.00
IUUC-Ppe-101321	Prunus persica	35.46	2.00e-58	217.00
IUUC-Pva-102759	Pteropus vampyrus	38.36	3.00e-61	226.00
IUUC-Pgr-103535	Puccinia graminis	34.10	7.00e-44	168.00
IUUC-Ptt-103820	Puccinia triticina	33.88	1.00e-43	168.00
IUUC-Pte-104271	Pyrenophora teres	31.80	7.00e-46	175.00
IUUC-Pyt-104500	Pyrenophora triticirepentis	30.86	4.00e-39	153.00
IUUC-Rno-106126	Rattus norvegicus	38.69	4.00e-62	229.00
IUUC-Sha-107146	Sarcophilus harrisii	38.69	3.00e-61	226.00
IUUC-Sja-107865	Schizosaccharomyces japonicus	58.36	5.00e-104	368.00
IUUC-Smo-109360	Selaginella moellendorffii	35.14	3.00e-57	213.00
IUUC-Sit-110773	Setaria italica	33.88	5.00e-53	199.00
IUUC-Sly-111619	Solanum lycopersicum	34.73	6.00e-59	218.00
IUUC-Stu-112241	Solanum tuberosum	35.05	6.00e-59	218.00
IUUC-Sbi-114842	Sorghum bicolor	34.44	5.00e-53	199.00
IUUC-Sre-115070	Sporisorium reilianum	31.45	2.00e-40	157.00
IUUC-Ssc-115581	Sus scrofa	38.69	5.00e-62	229.00
IUUC-Tgu-117354	Taeniopygia guttata	37.85	2.00e-58	216.00
IUUC-Tru-117745	Takifugu rubripes	38.36	9.00e-62	228.00
IUUC-Tni-120050	Tetraodon nigroviridis	37.70	2.00e-60	223.00
IUUC-Tca-121279	Theobroma cacao	36.25	6.00e-60	222.00
IUUC-Tre-121952	Trichoderma reesei	29.89	4.00e-43	166.00
IUUC-Tvi-122581	Trichoderma virens	30.25	5.00e-43	166.00
IUUC-Tae-124204	Triticum aestivum	36.08	1.00e-55	207.00
IUUC-Tur-126279	Triticum urartu	34.87	2.00e-54	203.00
IUUC-Tme-127000	Tuber melanosporum	36.05	4.00e-42	162.00
IUUC-Ttr-128405	Tursiops truncatus	42.06	1.00e-60	224.00
IUUC-Uma-129547	Ustilago maydis	30.59	9.00e-38	148.00
IUUC-Vda-129689	Verticillium dahliae	29.67	1.00e-36	144.00
IUUC-Vvi-131345	Vitis vinifera	34.63	4.00e-59	219.00
IUUC-Xtr-132136	Xenopus tropicalis	39.54	1.00e-61	228.00
IUUC-Xma-133767	Xiphophorus maculatus	38.03	1.00e-61	228.00
IUUC-Yli-134522	Yarrowia lipolytica	24.18	3.00e-25	107.00
IUUC-Zma-135816	Zea mays	34.44	1.00e-52	198.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence