iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Vda-129788

Ensembl Protein ID

EGY15259

UniProt Accession

G2X8H2; G2X8H2_VERDV

Genbank Protein ID

EGY15259.1

Protein Name

Set1 complex component swd1

Genbank Nucleotide ID

DS572707

Gene Name

VDAG_06113

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VDAG_06113	EGY15259	EGY15259

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.60e-13	47.7	29	57

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 6    vtclaf..sdtllvsGsdDgtikvWDlrt 32
            tcl+f  ++++l+sG  Dgt+ vWD+ t
   Q: 29   ATCLRFnkTGDFLASGRVDGTLVVWDIET 57
           59****96559***************765 PP

Organism

Verticillium dahliae

Protein Sequence
(Fasta)

MNLLLADPEE AVEYIEQITN TNTIRSGHAT CLRFNKTGDF LASGRVDGTL VVWDIETMGV 60
ARKMRGHNRS ITSLSWSGCG RYLLSACQGW KVILWDLQDG TKYREVRFRA PAYIAELHPH 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAACTTGC TTCTAGCCGA CCCCGAGGAG GCGGTCGAGT ACATTGAGCA AATCACAAAC 60
ACAAACACTA TACGCTCTGG CCACGCGACA TGCTTGCGCT TCAACAAGAC GGGCGACTTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR003143--Cyt_cd1_C
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005829--C:cytosol
GO:0048188--C:Set1C/COMPASS complex
GO:0051568--P:histone H3-K4 methylation

KEGG

vda:VDAG_06113

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000616	Aegilops tauschii	29.76	6.00e-40	157.00
IUUC-Aml-002118	Ailuropoda melanoleuca	26.87	1.00e-37	149.00
IUUC-Atr-002777	Amborella trichopoda	32.43	1.00e-44	172.00
IUUC-Apl-004056	Anas platyrhynchos	27.17	1.00e-36	145.00
IUUC-Aca-004999	Anolis carolinensis	27.17	2.00e-36	145.00
IUUC-Aly-006092	Arabidopsis lyrata	31.72	5.00e-40	157.00
IUUC-Ath-006947	Arabidopsis thaliana	31.72	2.00e-40	158.00
IUUC-Ago-007753	Ashbya gossypii	34.88	2.00e-56	211.00
IUUC-Acl-008105	Aspergillus clavatus	59.48	9.00e-143	498.00
IUUC-Afl-008633	Aspergillus flavus	57.17	4.00e-137	479.00
IUUC-Afu-009075	Aspergillus fumigatus	55.13	6.00e-109	385.00
IUUC-Ani-009233	Aspergillus nidulans	59.74	2.00e-152	530.00
IUUC-Ang-009695	Aspergillus niger	57.20	3.00e-138	483.00
IUUC-Aor-009988	Aspergillus oryzae	57.17	4.00e-137	479.00
IUUC-Ate-010313	Aspergillus terreus	57.92	2.00e-144	503.00
IUUC-Ame-011134	Astyanax mexicanus	26.08	3.00e-29	121.00
IUUC-Bgr-012302	Blumeria graminis	55.56	2.00e-140	490.00
IUUC-Bta-012946	Bos taurus	26.87	1.00e-37	149.00
IUUC-Bci-013968	Botrytis cinerea	56.04	2.00e-149	520.00
IUUC-Bdi-014387	Brachypodium distachyon	30.58	4.00e-47	180.00
IUUC-Bra-017414	Brassica rapa	31.71	1.00e-39	155.00
IUUC-Cel-018610	Caenorhabditis elegans	25.50	1.00e-38	152.00
IUUC-Cja-019938	Callithrix jacchus	26.87	2.00e-37	148.00
IUUC-Cfa-020726	Canis familiaris	26.87	1.00e-37	149.00
IUUC-Cpo-021560	Cavia porcellus	27.19	6.00e-33	132.00
IUUC-Cre-022588	Chlamydomonas reinhardtii	44.25	3.00e-26	110.00
IUUC-Csa-024192	Chlorocebus sabaeus	26.87	1.00e-37	149.00
IUUC-Cho-024355	Choloepus hoffmanni	26.87	2.00e-37	148.00
IUUC-Cin-025285	Ciona intestinalis	29.89	4.00e-43	167.00
IUUC-Csv-026366	Ciona savignyi	28.77	2.00e-40	157.00
IUUC-Cgl-026450	Colletotrichum gloeosporioides	71.37	0.00e+00	655.00
IUUC-Cne-027092	Cryptococcus neoformans	32.51	5.00e-48	183.00
IUUC-Cme-027137	Cyanidioschyzon merolae	28.15	2.00e-19	88.60
IUUC-Dre-027374	Danio rerio	27.73	8.00e-37	146.00
IUUC-Dno-030003	Dasypus novemcinctus	26.36	9.00e-32	129.00
IUUC-Dor-030355	Dipodomys ordii	26.18	2.00e-37	148.00
IUUC-Dse-031442	Dothistroma septosporum	50.75	8.00e-121	425.00
IUUC-Dme-031932	Drosophila melanogaster	30.51	4.00e-49	187.00
IUUC-Ete-032858	Echinops telfairi	25.00	1.00e-24	105.00
IUUC-Eca-034217	Equus caballus	26.87	1.00e-37	149.00
IUUC-Eeu-035024	Erinaceus europaeus	27.50	1.00e-37	149.00
IUUC-Fca-035370	Felis catus	26.87	2.00e-37	148.00
IUUC-Fal-036628	Ficedula albicollis	27.27	1.00e-35	142.00
IUUC-Fox-037739	Fusarium oxysporum	67.55	4.00e-176	608.00
IUUC-Fso-038094	Fusarium solani	68.05	2.00e-179	619.00
IUUC-Gmo-039088	Gadus morhua	27.37	4.00e-36	144.00
IUUC-Ggr-040063	Gaeumannomyces graminis	65.03	2.00e-175	606.00
IUUC-Gga-041160	Gallus gallus	27.17	1.00e-36	145.00
IUUC-Gac-041333	Gasterosteus aculeatus	27.83	1.00e-36	145.00
IUUC-Gma-044101	Glycine max	30.45	1.00e-44	172.00
IUUC-Ggo-044657	Gorilla gorilla	26.87	1.00e-37	149.00
IUUC-Hsa-045894	Homo sapiens	26.87	1.00e-37	149.00
IUUC-Hvu-047662	Hordeum vulgare	29.47	4.00e-40	157.00
IUUC-Itr-048125	Ictidomys tridecemlineatus	26.71	3.00e-36	144.00
IUUC-Kpa-049095	Komagataella pastoris	37.11	1.00e-67	248.00
IUUC-Lch-049495	Latimeria chalumnae	24.65	9.00e-19	86.30
IUUC-Lpe-051038	Leersia perrieri	28.83	3.00e-34	138.00
IUUC-Loc-052680	Lepisosteus oculatus	27.73	1.00e-37	149.00
IUUC-Laf-053717	Loxodonta africana	26.87	2.00e-37	148.00
IUUC-Mcc-055007	Macaca mulatta	26.84	3.00e-37	147.00
IUUC-Meu-056494	Macropus eugenii	31.87	4.00e-09	54.30
IUUC-Mor-057173	Magnaporthe oryzae	64.41	5.00e-171	592.00
IUUC-Mpo-057622	Magnaporthe poae	64.80	3.00e-174	602.00
IUUC-Mtr-057672	Medicago truncatula	31.02	6.00e-47	180.00
IUUC-Mla-059057	Melampsora laricipopulina	29.83	8.00e-41	159.00
IUUC-Mga-060037	Meleagris gallopavo	27.02	3.00e-36	144.00
IUUC-Mvi-060321	Microbotryum violaceum	31.14	3.00e-47	181.00
IUUC-Mmr-060755	Microcebus murinus	26.93	6.00e-37	146.00
IUUC-Mdo-061859	Monodelphis domestica	27.17	1.00e-36	145.00
IUUC-Mmu-063755	Mus musculus	26.18	3.00e-37	147.00
IUUC-Mac-065292	Musa acuminata	31.43	4.00e-46	178.00
IUUC-Mpu-065896	Mustela putorius furo	26.87	2.00e-37	148.00
IUUC-Mlu-067927	Myotis lucifugus	26.18	3.00e-37	147.00
IUUC-Nfi-068429	Neosartorya fischeri	57.67	1.00e-144	504.00
IUUC-Ncr-068738	Neurospora crassa	63.74	3.00e-160	556.00
IUUC-Nle-069608	Nomascus leucogenys	26.87	1.00e-37	149.00
IUUC-Opr-070319	Ochotona princeps	26.44	9.00e-36	142.00
IUUC-Ont-071451	Oreochromis niloticus	27.92	2.00e-36	145.00
IUUC-Oan-073445	Ornithorhynchus anatinus	26.94	1.00e-34	139.00
IUUC-Ocu-074341	Oryctolagus cuniculus	26.87	2.00e-37	148.00
IUUC-Oba-075664	Oryza barthii	30.02	2.00e-40	158.00
IUUC-Obr-076630	Oryza brachyantha	30.21	7.00e-41	159.00
IUUC-Ogl-077847	Oryza glaberrima	30.02	1.00e-40	159.00
IUUC-Ogu-077970	Oryza glumaepatula	30.42	8.00e-39	152.00
IUUC-Oin-079374	Oryza indica	29.79	5.00e-40	157.00
IUUC-Olo-080992	Oryza longistaminata	30.02	2.00e-40	158.00
IUUC-Ome-081683	Oryza meridionalis	30.21	8.00e-39	153.00
IUUC-Oni-082594	Oryza nivara	29.79	5.00e-40	157.00
IUUC-Opu-083907	Oryza punctata	30.02	2.00e-40	158.00
IUUC-Oru-084400	Oryza rufipogon	30.02	1.00e-40	159.00
IUUC-Osa-085442	Oryza sativa	30.02	1.00e-40	159.00
IUUC-Ola-086569	Oryzias latipes	27.92	4.00e-36	144.00
IUUC-Oga-088947	Otolemur garnettii	26.44	2.00e-35	141.00
IUUC-Oar-090358	Ovis aries	26.87	3.00e-37	147.00
IUUC-Ptr-091601	Pan troglodytes	26.87	1.00e-37	149.00
IUUC-Pan-092466	Papio anubis	26.87	1.00e-37	149.00
IUUC-Psi-093614	Pelodiscus sinensis	27.17	1.00e-36	145.00
IUUC-Pma-094450	Petromyzon marinus	27.32	5.00e-37	147.00
IUUC-Pno-094819	Phaeosphaeria nodorum	56.25	4.00e-134	469.00
IUUC-Ppa-095157	Physcomitrella patens	34.72	1.00e-22	98.20
IUUC-Pfo-096312	Poecilia formosa	27.66	3.00e-36	144.00
IUUC-Pab-098058	Pongo abelii	26.87	1.00e-37	149.00
IUUC-Pop-099039	Populus trichocarpa	32.87	2.00e-45	175.00
IUUC-Pca-100623	Procavia capensis	27.45	8.00e-37	146.00
IUUC-Ppe-102053	Prunus persica	31.65	2.00e-45	175.00
IUUC-Pva-102779	Pteropus vampyrus	27.35	1.00e-34	139.00
IUUC-Pgr-103398	Puccinia graminis	32.75	5.00e-45	173.00
IUUC-Ptt-103912	Puccinia triticina	32.65	3.00e-45	174.00
IUUC-Pte-104246	Pyrenophora teres	56.09	4.00e-134	469.00
IUUC-Pyt-104582	Pyrenophora triticirepentis	55.87	9.00e-134	468.00
IUUC-Rno-104838	Rattus norvegicus	26.87	2.00e-37	149.00
IUUC-Sce-106229	Saccharomyces cerevisiae	34.84	8.00e-60	222.00
IUUC-Sha-106527	Sarcophilus harrisii	27.17	1.00e-36	145.00
IUUC-Sja-107862	Schizosaccharomyces japonicus	42.39	3.00e-91	326.00
IUUC-Spo-108025	Schizosaccharomyces pombe	42.37	3.00e-82	296.00
IUUC-Ssl-108544	Sclerotinia sclerotiorum	56.04	5.00e-149	518.00
IUUC-Smo-109474	Selaginella moellendorffii	32.08	3.00e-35	141.00
IUUC-Sit-110485	Setaria italica	32.20	2.00e-42	164.00
IUUC-Sly-111597	Solanum lycopersicum	33.33	1.00e-44	172.00
IUUC-Stu-112389	Solanum tuberosum	32.33	4.00e-44	171.00
IUUC-Sar-113284	Sorex araneus	28.69	9.00e-20	89.70
IUUC-Sbi-114362	Sorghum bicolor	29.71	2.00e-37	149.00
IUUC-Sre-115146	Sporisorium reilianum	30.48	5.00e-45	173.00
IUUC-Ssc-115604	Sus scrofa	26.87	2.00e-37	148.00
IUUC-Tru-118258	Takifugu rubripes	27.92	1.00e-36	145.00
IUUC-Tsy-119169	Tarsius syrichta	27.30	9.00e-33	132.00
IUUC-Tni-119939	Tetraodon nigroviridis	27.85	7.00e-36	143.00
IUUC-Tca-121010	Theobroma cacao	32.27	2.00e-48	184.00
IUUC-Tre-121944	Trichoderma reesei	70.02	1.00e-179	620.00
IUUC-Tvi-122283	Trichoderma virens	70.25	2.00e-179	620.00
IUUC-Tur-126395	Triticum urartu	29.06	5.00e-40	157.00
IUUC-Tme-127150	Tuber melanosporum	50.00	6.00e-124	435.00
IUUC-Tbe-127745	Tupaia belangeri	22.76	2.00e-17	82.00
IUUC-Ttr-129187	Tursiops truncatus	27.45	1.00e-36	145.00
IUUC-Uma-129654	Ustilago maydis	30.09	4.00e-39	154.00
IUUC-Vpa-130182	Vicugna pacos	25.55	2.00e-25	108.00
IUUC-Vvi-131557	Vitis vinifera	30.56	1.00e-44	172.00
IUUC-Xtr-132007	Xenopus tropicalis	27.17	4.00e-37	147.00
IUUC-Xma-133909	Xiphophorus maculatus	28.93	1.00e-36	145.00
IUUC-Yli-134524	Yarrowia lipolytica	42.71	3.00e-84	303.00
IUUC-Zma-134821	Zea mays	29.54	7.00e-39	153.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence