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Tag Content
iUUCD ID IUUC-Loc-052623
Ensembl Protein ID ENSLOCP00000007447.1
UniProt Accession W5MGD8; W5MGD8_LEPOC
Genbank Protein ID ENSLOCP00000007447
Protein Name Katanin p80 WD40 repeat-containing subunit B1; p80 katanin
Genbank Nucleotide ID AHAT01020939
Gene Name katnb1; KATNB1
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSLOCG00000006166.1 ENSLOCT00000007455.1 ENSLOCP00000007447.1
ENSLOCG00000006166.1 ENSLOCT00000007478.1 ENSLOCP00000007470.1
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 2.80e-46 153.6 145 180
UBD/Beta-Prp 5.30e-62 209.8 15 264
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgv 34
    gHt v+claf +d + l+s+sdD t+k+WDl+ g+
   Q: 145 GHTQAVRCLAFsPDgKWLSSASDDSTVKLWDLTAGK 180
    8***********999*****************9987 PP
   


   UBD/Beta-Prp

   S: 4    tlkghhksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkg 92
    ++ +h ++v + v +++llatg++d ++ +w v +++++ sl gh+++v +++f+++++ v gs+ + ++vwdl++ k+++ l+g
   Q: 15 EIVAHASNVSSLVLGQTSGRLLATGGEDCRVNIWAVNKPNCIMSLMGHNNPVESIQFNSSEEQVVAGSQSGSLRVWDLEAAKILRNLSG 103
    67788888889888899************************************************************************ PP
   S: 93 hedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtd 181
    h+++v+sl+f+p gd+++sGs d i++wd++ + c+ +gh+++v+c++++pdg+ l s+s+D+tv+lWdl gk+++++t ht+
   Q: 104 HKANVCSLDFHPFGDYVASGSMDTNIKLWDIRRKGCVF-RYKGHTQAVRCLAFSPDGKWLSSASDDSTVKLWDLTAGKMITEFTA-HTG 190
    *************************************9.9********************************************8.*** PP
   S: 182 svyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdl 256
    +v+ ++f++n l+sgs d+t+klwdl++ +++ + +g t ++++++f p++ l+sgs+D +r++ + + +
   Q: 191 PVNIVKFHPNEYLLASGSSDRTIKLWDLEKFKMIGSTEGETGPIRCIAFNPDGCCLYSGSQD-CLRVYGWEPDRC 264
    ************************************************************87.455554455555 PP
   

Organism Lepisosteus oculatus
Functional Description
(View)

Functional Description



     Participates in a complex which severs microtubules in an ATP-dependent manner. May act to target the enzymatic subunit of this complex to sites of action such as the centrosome. Microtubule severing may promote rapid reorganization of cellular microtubule arrays and the release of microtubules from the centrosome following nucleation.
Participates in a complex which severs microtubules in an ATP-dependent manner. May act to target the enzymatic subunit of this complex to sites of action such as the centrosome. Microtubule severing may promote rapid reorganization of cellular microtubule arrays and the release of microtubules from the centrosome following nucleation.
Protein Sequence
(Fasta)
MAAANTTKTS WKLQEIVAHA SNVSSLVLGQ TSGRLLATGG EDCRVNIWAV NKPNCIMSLM 60
GHNNPVESIQ FNSSEEQVVA GSQSGSLRVW DLEAAKILRN LSGHKANVCS LDFHPFGDYV 120
It may take some time, please wait.

Protein Fasta Sequence



>IUUC-Loc-052623|E3,WD_repeat;UBD,Beta-Prp|Lepisosteus oculatus
Please wait for a moment...
Nucleotide Sequence
(Fasta)
TTTACTGCGA CTGTGGGTTG GGGTGTGGAT CGGAGAATAG ATACTTTGAA AAACATCAGT 60
TAAAAGGGTA TTTATGGACT CTTGAAAAGG CTATTTAATA AAATAGGTGC TTCTGTGAAT 120
It may take some time, please wait.

Nucleotide Fasta Sequence



>IUUC-Loc-052623|E3,WD_repeat;UBD,Beta-Prp|Lepisosteus oculatus
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0131--Cell cycle
KW-0132--Cell division
KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-0206--Cytoskeleton
KW-0493--Microtubule
KW-0498--Mitosis
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR003143--Cyt_cd1_C
IPR020472--G-protein_beta_WD-40_rep
IPR026962--Katanin_bsu1
IPR028021--Katanin_C-terminal
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF13925--Katanin_con80
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005813--C:centrosome
GO:0008352--C:katanin complex
GO:0005874--C:microtubule
GO:0000922--C:spindle pole
GO:0051301--P:cell division
GO:0051013--P:microtubule severing
GO:0030901--P:midbrain development
GO:0007067--P:mitotic nuclear division

Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000954 Aegilops tauschii 43.97 2.00e-83 304.00
IUUC-Aml-002187 Ailuropoda melanoleuca 65.63 0.00e+00 820.00
IUUC-Atr-002899 Amborella trichopoda 53.08 8.00e-97 348.00
IUUC-Apl-003305 Anas platyrhynchos 67.91 0.00e+00 877.00
IUUC-Aca-004635 Anolis carolinensis 67.74 0.00e+00 839.00
IUUC-Aly-005711 Arabidopsis lyrata 52.49 3.00e-100 359.00
IUUC-Ath-007606 Arabidopsis thaliana 52.49 4.00e-100 359.00
IUUC-Ame-010870 Astyanax mexicanus 69.34 1.00e-123 436.00
IUUC-Bta-012527 Bos taurus 66.05 0.00e+00 870.00
IUUC-Bdi-014652 Brachypodium distachyon 48.90 1.00e-100 361.00
IUUC-Bol-016374 Brassica oleracea 44.65 3.00e-98 353.00
IUUC-Bra-017390 Brassica rapa 50.97 1.00e-97 350.00
IUUC-Cja-019706 Callithrix jacchus 67.44 0.00e+00 819.00
IUUC-Cfa-020139 Canis familiaris 55.98 4.00e-153 534.00
IUUC-Cpo-021710 Cavia porcellus 67.10 0.00e+00 857.00
IUUC-Cre-022746 Chlamydomonas reinhardtii 41.99 2.00e-65 243.00
IUUC-Csa-023546 Chlorocebus sabaeus 66.52 0.00e+00 782.00
IUUC-Cin-025156 Ciona intestinalis 40.85 1.00e-146 513.00
IUUC-Csv-025962 Ciona savignyi 50.89 6.00e-86 310.00
IUUC-Dre-028215 Danio rerio 73.21 0.00e+00 971.00
IUUC-Dno-029314 Dasypus novemcinctus 66.09 0.00e+00 820.00
IUUC-Dor-030482 Dipodomys ordii 67.30 0.00e+00 871.00
IUUC-Dme-032188 Drosophila melanogaster 42.29 2.00e-62 233.00
IUUC-Eca-034143 Equus caballus 66.18 0.00e+00 852.00
IUUC-Fca-035924 Felis catus 67.63 0.00e+00 849.00
IUUC-Fal-037387 Ficedula albicollis 65.51 0.00e+00 875.00
IUUC-Gmo-038692 Gadus morhua 71.88 3.00e-169 588.00
IUUC-Gga-040597 Gallus gallus 66.33 0.00e+00 896.00
IUUC-Gac-042004 Gasterosteus aculeatus 67.88 0.00e+00 921.00
IUUC-Gma-044134 Glycine max 53.16 4.00e-96 345.00
IUUC-Ggo-044761 Gorilla gorilla 66.52 0.00e+00 803.00
IUUC-Hsa-045698 Homo sapiens 66.81 0.00e+00 822.00
IUUC-Hvu-047649 Hordeum vulgare 47.32 3.00e-100 359.00
IUUC-Itr-048697 Ictidomys tridecemlineatus 67.82 0.00e+00 846.00
IUUC-Lch-049674 Latimeria chalumnae 69.29 0.00e+00 950.00
IUUC-Lpe-051554 Leersia perrieri 47.53 1.00e-101 364.00
IUUC-Laf-054587 Loxodonta africana 66.42 0.00e+00 868.00
IUUC-Mcc-055851 Macaca mulatta 66.52 0.00e+00 803.00
IUUC-Meu-056704 Macropus eugenii 68.21 0.00e+00 921.00
IUUC-Mtr-058053 Medicago truncatula 52.82 2.00e-100 360.00
IUUC-Mga-059608 Meleagris gallopavo 64.72 0.00e+00 881.00
IUUC-Mmr-061154 Microcebus murinus 65.49 0.00e+00 842.00
IUUC-Mdo-062365 Monodelphis domestica 66.09 0.00e+00 872.00
IUUC-Mmu-063754 Mus musculus 66.95 0.00e+00 851.00
IUUC-Mac-065100 Musa acuminata 52.68 2.00e-96 346.00
IUUC-Mpu-066245 Mustela putorius furo 74.88 2.00e-168 585.00
IUUC-Mlu-067692 Myotis lucifugus 68.14 0.00e+00 847.00
IUUC-Nle-070051 Nomascus leucogenys 67.00 0.00e+00 809.00
IUUC-Opr-070855 Ochotona princeps 68.90 0.00e+00 857.00
IUUC-Ont-071883 Oreochromis niloticus 66.95 0.00e+00 917.00
IUUC-Oan-073293 Ornithorhynchus anatinus 68.88 0.00e+00 848.00
IUUC-Ocu-074644 Oryctolagus cuniculus 68.25 0.00e+00 859.00
IUUC-Oba-075448 Oryza barthii 53.33 2.00e-100 360.00
IUUC-Obr-076385 Oryza brachyantha 46.98 1.00e-100 361.00
IUUC-Ogl-077427 Oryza glaberrima 46.93 6.00e-101 362.00
IUUC-Ogu-079022 Oryza glumaepatula 48.79 1.00e-91 331.00
IUUC-Oin-079811 Oryza indica 46.47 4.00e-98 352.00
IUUC-Olo-080245 Oryza longistaminata 46.47 4.00e-98 352.00
IUUC-Ome-081239 Oryza meridionalis 53.06 2.00e-97 350.00
IUUC-Oni-082640 Oryza nivara 53.33 2.00e-100 360.00
IUUC-Opu-083748 Oryza punctata 53.67 5.00e-101 362.00
IUUC-Oru-084609 Oryza rufipogon 53.33 2.00e-100 360.00
IUUC-Osa-086267 Oryza sativa 48.79 1.00e-91 331.00
IUUC-Ola-087483 Oryzias latipes 61.70 0.00e+00 716.00
IUUC-Oga-087964 Otolemur garnettii 67.15 0.00e+00 872.00
IUUC-Oar-089483 Ovis aries 64.72 0.00e+00 838.00
IUUC-Ptr-091387 Pan troglodytes 66.81 0.00e+00 822.00
IUUC-Pan-092623 Papio anubis 66.52 0.00e+00 803.00
IUUC-Psi-093830 Pelodiscus sinensis 66.19 0.00e+00 903.00
IUUC-Pma-094135 Petromyzon marinus 39.92 3.00e-34 137.00
IUUC-Ppa-095379 Physcomitrella patens 53.72 1.00e-92 334.00
IUUC-Pfo-096755 Poecilia formosa 66.76 0.00e+00 921.00
IUUC-Pab-097564 Pongo abelii 65.74 0.00e+00 698.00
IUUC-Pop-099149 Populus trichocarpa 53.16 2.00e-101 363.00
IUUC-Pca-100357 Procavia capensis 80.48 6.00e-106 378.00
IUUC-Ppe-101237 Prunus persica 52.49 1.00e-99 357.00
IUUC-Pva-102397 Pteropus vampyrus 64.79 0.00e+00 791.00
IUUC-Rno-105349 Rattus norvegicus 66.67 0.00e+00 869.00
IUUC-Smo-109379 Selaginella moellendorffii 54.01 2.00e-97 350.00
IUUC-Sit-110360 Setaria italica 46.55 2.00e-101 363.00
IUUC-Sly-111307 Solanum lycopersicum 47.47 3.00e-96 346.00
IUUC-Stu-112462 Solanum tuberosum 49.69 3.00e-92 332.00
IUUC-Sar-112953 Sorex araneus 64.91 4.00e-88 318.00
IUUC-Sbi-114389 Sorghum bicolor 47.86 1.00e-90 327.00
IUUC-Ssc-115949 Sus scrofa 62.01 4.00e-175 607.00
IUUC-Tgu-117461 Taeniopygia guttata 66.19 0.00e+00 898.00
IUUC-Tru-117865 Takifugu rubripes 66.86 0.00e+00 919.00
IUUC-Tsy-119036 Tarsius syrichta 76.38 8.00e-56 211.00
IUUC-Tni-120903 Tetraodon nigroviridis 66.33 0.00e+00 891.00
IUUC-Tca-121185 Theobroma cacao 52.16 2.00e-98 354.00
IUUC-Tae-125668 Triticum aestivum 48.17 5.00e-101 362.00
IUUC-Tur-126181 Triticum urartu 47.10 1.00e-88 320.00
IUUC-Tbe-127518 Tupaia belangeri 70.50 8.00e-81 294.00
IUUC-Ttr-128172 Tursiops truncatus 66.81 0.00e+00 835.00
IUUC-Vvi-131489 Vitis vinifera 53.49 1.00e-101 363.00
IUUC-Xtr-132915 Xenopus tropicalis 64.22 0.00e+00 857.00
IUUC-Xma-134133 Xiphophorus maculatus 66.18 0.00e+00 905.00
Created Date 25-Jun-2017

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