iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Smo-108946

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Putative uncharacterized protein CHR4-1

Genbank Nucleotide ID

GL377666

Gene Name

CHR4-1; SELMODRAFT_428350

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SELMODRAFT_428350	EFJ09071	EFJ09071

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	1.50e-13	51.4	248	290

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 4    ClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCr 52
           C vC++gg+    l++C++C +++H +Cl+++  +  p+ + w Cp+C 
   Q: 248  CMVCQSGGN----LLCCDHCPRVYHLHCLSPP-LKRAPTGK-WRCPDCI 290
           *********....*******************.999****7.******6 PP

Organism

Selaginella moellendorffii

Protein Sequence
(Fasta)

MTLENGATIE KSNDSSPKYS KKRRNGRKNG GAKIWAAASD ELHASNDEAE AFEPDSLVWA 60
RIEESLWWPA FVPSLENLPL SVLRQKQEGW VCVKYYNNAL CNSCFAWLEP KDIVLYNGGT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGACGCTGG AGAATGGCGC TACTATAGAA AAATCGAATG ACTCCTCTCC AAAGTACTCG 60
AAGAAACGTC GCAATGGCCG CAAAAATGGT GGAGCGAAGA TCTGGGCTGC GGCATCCGAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR000953--Chromo/chromo_shadow_dom
IPR023780--Chromo_domain
IPR016197--Chromodomain-like
IPR009463--DUF1087
IPR014001--Helicase_ATP-bd
IPR001650--Helicase_C
IPR009057--Homeobox-like
IPR017877--Myb-like_dom
IPR027417--P-loop_NTPase
IPR000313--PWWP_dom
IPR000330--SNF2_N
IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50013--CHROMO_2
PS51192--HELICASE_ATP_BIND_1
PS51194--HELICASE_CTER
PS50090--MYB_LIKE
PS50812--PWWP
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF00385--Chromo
PF06465--DUF1087
PF00271--Helicase_C
PF00628--PHD
PF00855--PWWP
PF00176--SNF2_N

SMART

SM00298--CHROMO
SM00487--DEXDc
SM01147--DUF1087
SM00490--HELICc
SM00249--PHD

Gene Ontology

GO:0005634--C:nucleus
GO:0005524--F:ATP binding
GO:0003677--F:DNA binding
GO:0008270--F:zinc ion binding

KEGG

smo:SELMODRAFT_428350

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001701	Ailuropoda melanoleuca	35.95	1.00e-139	490.00
IUUC-Apl-003406	Anas platyrhynchos	38.53	3.00e-134	473.00
IUUC-Aca-004671	Anolis carolinensis	37.73	3.00e-138	486.00
IUUC-Aly-005645	Arabidopsis lyrata	59.15	0.00e+00	1000.00
IUUC-Ath-007406	Arabidopsis thaliana	62.85	0.00e+00	1031.00
IUUC-Ame-011098	Astyanax mexicanus	38.62	2.00e-137	483.00
IUUC-Bta-012951	Bos taurus	38.32	2.00e-137	483.00
IUUC-Bol-016073	Brassica oleracea	61.97	0.00e+00	1043.00
IUUC-Bra-016724	Brassica rapa	61.86	0.00e+00	1042.00
IUUC-Cel-018108	Caenorhabditis elegans	40.43	3.00e-142	499.00
IUUC-Cja-018871	Callithrix jacchus	35.90	2.00e-145	510.00
IUUC-Cfa-021063	Canis familiaris	38.41	2.00e-139	490.00
IUUC-Cpo-022083	Cavia porcellus	38.41	2.00e-139	489.00
IUUC-Csa-023084	Chlorocebus sabaeus	36.59	2.00e-147	516.00
IUUC-Cho-024361	Choloepus hoffmanni	40.06	7.00e-119	422.00
IUUC-Csv-025847	Ciona savignyi	37.96	1.00e-138	487.00
IUUC-Dre-028226	Danio rerio	38.55	3.00e-142	499.00
IUUC-Dno-029923	Dasypus novemcinctus	39.40	2.00e-134	473.00
IUUC-Dor-030167	Dipodomys ordii	38.65	3.00e-137	483.00
IUUC-Dme-032150	Drosophila melanogaster	38.78	6.00e-142	498.00
IUUC-Ete-032757	Echinops telfairi	37.53	4.00e-116	412.00
IUUC-Eca-034372	Equus caballus	38.18	1.00e-139	490.00
IUUC-Eeu-034777	Erinaceus europaeus	35.86	3.00e-117	416.00
IUUC-Fca-036048	Felis catus	38.45	9.00e-140	491.00
IUUC-Fal-037282	Ficedula albicollis	37.99	6.00e-138	485.00
IUUC-Gmo-038957	Gadus morhua	40.73	3.00e-137	483.00
IUUC-Gga-040607	Gallus gallus	38.65	2.00e-139	490.00
IUUC-Gac-041375	Gasterosteus aculeatus	39.91	5.00e-151	528.00
IUUC-Gma-043999	Glycine max	46.53	9.00e-166	577.00
IUUC-Ggo-044514	Gorilla gorilla	36.59	2.00e-147	517.00
IUUC-Hsa-046181	Homo sapiens	36.59	2.00e-147	516.00
IUUC-Itr-048463	Ictidomys tridecemlineatus	39.00	3.00e-138	486.00
IUUC-Lch-050343	Latimeria chalumnae	43.22	3.00e-138	486.00
IUUC-Loc-052383	Lepisosteus oculatus	38.23	5.00e-131	462.00
IUUC-Laf-053749	Loxodonta africana	38.93	2.00e-140	494.00
IUUC-Mcc-055856	Macaca mulatta	36.59	1.00e-147	517.00
IUUC-Meu-056292	Macropus eugenii	48.02	5.00e-43	169.00
IUUC-Mga-059630	Meleagris gallopavo	38.83	3.00e-138	486.00
IUUC-Mmr-060986	Microcebus murinus	38.64	3.00e-142	499.00
IUUC-Mdo-062971	Monodelphis domestica	38.42	4.00e-136	479.00
IUUC-Mmu-063644	Mus musculus	39.05	2.00e-140	493.00
IUUC-Mpu-066528	Mustela putorius furo	38.55	2.00e-139	490.00
IUUC-Mlu-067355	Myotis lucifugus	39.00	1.00e-138	487.00
IUUC-Nle-069824	Nomascus leucogenys	36.38	2.00e-148	520.00
IUUC-Opr-070960	Ochotona princeps	37.76	1.00e-130	461.00
IUUC-Ont-072235	Oreochromis niloticus	39.04	6.00e-145	508.00
IUUC-Oan-072885	Ornithorhynchus anatinus	39.88	2.00e-108	387.00
IUUC-Ocu-074438	Oryctolagus cuniculus	39.00	3.00e-138	486.00
IUUC-Ola-086880	Oryzias latipes	38.71	5.00e-140	492.00
IUUC-Oga-088775	Otolemur garnettii	38.41	2.00e-142	499.00
IUUC-Oar-090301	Ovis aries	38.48	5.00e-138	485.00
IUUC-Ptr-090586	Pan troglodytes	36.49	2.00e-146	513.00
IUUC-Pan-092282	Papio anubis	36.59	1.00e-147	517.00
IUUC-Psi-093007	Pelodiscus sinensis	38.44	4.00e-139	489.00
IUUC-Ppa-095491	Physcomitrella patens	62.82	0.00e+00	952.00
IUUC-Pfo-096265	Poecilia formosa	38.51	5.00e-147	515.00
IUUC-Pab-097677	Pongo abelii	36.58	3.00e-147	516.00
IUUC-Pca-100829	Procavia capensis	41.41	1.00e-133	471.00
IUUC-Pva-103186	Pteropus vampyrus	37.60	8.00e-138	484.00
IUUC-Rno-105378	Rattus norvegicus	38.57	3.00e-140	493.00
IUUC-Sha-107350	Sarcophilus harrisii	38.60	4.00e-140	492.00
IUUC-Sly-110976	Solanum lycopersicum	42.07	6.00e-167	581.00
IUUC-Ssc-116303	Sus scrofa	38.18	7.00e-142	498.00
IUUC-Tgu-116779	Taeniopygia guttata	37.81	1.00e-136	481.00
IUUC-Tru-118648	Takifugu rubripes	39.79	6.00e-149	521.00
IUUC-Tsy-119261	Tarsius syrichta	40.16	6.00e-114	405.00
IUUC-Tni-120039	Tetraodon nigroviridis	39.56	9.00e-144	504.00
IUUC-Tbe-128117	Tupaia belangeri	39.07	2.00e-79	290.00
IUUC-Ttr-128301	Tursiops truncatus	35.91	2.00e-142	500.00
IUUC-Vpa-130209	Vicugna pacos	46.38	2.00e-70	261.00
IUUC-Vvi-130849	Vitis vinifera	42.33	1.00e-163	570.00
IUUC-Xtr-132668	Xenopus tropicalis	42.01	2.00e-132	466.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence