• HOME
  • BROWSE
  • SEARCH
  • LINK
  • DOWNLOAD
  • USER GUIDE
  • Protein
  • Gene
  • Annotation
  • Classification
  • Domain Profile
  • Function
  • Protein Sequence
  • Nucleotide Sequence
  • Keyword
  • GO
  • Orthology
  • TOP

Tag Content
iUUCD ID IUUC-Ssc-116257
Ensembl Protein ID ENSSSCP00000026853.1
UniProt Accession I3LRW2; I3LRW2_PIG
Genbank Protein ID ENSSSCP00000026853
Protein Name Uncharacterized protein
Genbank Nucleotide ID CU928306
Gene Name WDR90
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSSSCG00000007991.2 ENSSSCT00000023121.1 ENSSSCP00000022115.1
ENSSSCG00000007991.2 ENSSSCT00000030146.1 ENSSSCP00000026853.1
ENSSSCG00000007991.2 ENSSSCT00000008756.2 ENSSSCP00000008532.2
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 7.40e-37 124.0 1506 1539
UBD/Beta-Prp 7.70e-75 252.1 1374 1679
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD
   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrt 32
           gH + v+ + f ++  + +++s+Dg+++vW+l +
   Q: 1506 GHRSQVNEVVFsPGgSRCATCSNDGSLRVWSLAS 1539
           8***********88899**************865 PP
   

   UBD/Beta-Prp
   S: 56   tavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqclee........... 131
           t+++f    ++l  gs  + ++vwd+++  c+ ++++ + ++  l +    ++lvsGs+ r +r+w +    +l+            
   Q: 1374 TSLCFGAA-PLLYCGSHTGRLCVWDMRADRCFLAWEADDGQIGVLLSGG--ERLVSGSNTRRLRLWAVGAVPELRRkgssarsggsv 1457
           45555555.3666666666677777777777777777777766655544..677777777777777777777776667777777777 PP
   S: 132  .............................................tlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllr 173
                                                        + sgh++ vn vv++p g+ ++++s+D+ +r+W+l++++ll 
   Q: 1458 flegeltldgavvsavfhdsmdmgvvgtaagtlwyvswaegastrLVSGHRSQVNEVVFSPGGSRCATCSNDGSLRVWSLASMELLI 1544
           77777777777777777777777777777777777777777777799**************99************************ PP
   S: 174  tltgghtdsvyslsfdsng......kelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsg 254
           +++    +s  +l++++ +      +++++g  dgt++++++++  +  +++ h + v+ v fs +++ l+sg ++g + +   r+g
   Q: 1545 QFQV-LSQSCLCLAWSPPScgrpeqQQVAAGYGDGTLRVFSVSRMAMELKMHPHPAAVTAVVFSADGQTLLSGDKEGLVAVSRPRTG 1630
           **98.99*******88877888888************************************************************** PP
   S: 255  dllktlqlhnssvisvavlsfgdnvl...........vlgsedskvniwkl 294
            +l++l  h+    ++++++ +++++           +++s+d++v +w+ 
   Q: 1631 VTLRVLRDHRG--APICTIQSTRKEYgdfgaegadlwLAASGDQRVSVWAS 1679
           ********994..44444334444444445555566677777*******85 PP
   
Organism Sus scrofa
Protein Sequence
(Fasta)
LSPVWQHPFL NVFRHFKVDE WKRSTKEGDV AAVTDKTLKC SVYRVRGSIS AANYIQLPKT 60
STQSLGLTGR YLYVLFRPLP TKHFVIHLDV ATEDSQVIRL SFSSLYKEVK STATWLQFPF 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Ssc-116257|E3,WD_repeat;UBD,Beta-Prp|Sus scrofa
Please wait for a moment...
Nucleotide Sequence
(Fasta)
GGCTCCCGAC ATGCGATTGG CCGCAGATGC CAGGTTGGAA GCGCCTGCCC GAGGNNNNNN 60
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Ssc-116257|E3,WD_repeat;UBD,Beta-Prp|Sus scrofa
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat
Interpro

IPR007714--CFA20/WDR90/C3orf67
IPR011047--Quinoprotein_ADH-like_supfam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom
IPR030466--WDR90
PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
Pfam

PF05018--DUF667
PF00400--WD40
SMART

SM00320--WD40
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Aml-001801 Ailuropoda melanoleuca 69.38 0.00e+00 1356.00
IUUC-Apl-003387 Anas platyrhynchos 52.20 0.00e+00 1622.00
IUUC-Aca-005235 Anolis carolinensis 51.58 0.00e+00 1569.00
IUUC-Ame-011595 Astyanax mexicanus 46.49 0.00e+00 1587.00
IUUC-Bta-012328 Bos taurus 71.76 0.00e+00 2337.00
IUUC-Cja-019058 Callithrix jacchus 65.46 0.00e+00 1145.00
IUUC-Cfa-020934 Canis familiaris 66.81 0.00e+00 2146.00
IUUC-Cpo-022025 Cavia porcellus 64.01 0.00e+00 2130.00
IUUC-Cre-022928 Chlamydomonas reinhardtii 29.27 1.00e-61 232.00
IUUC-Csa-023022 Chlorocebus sabaeus 67.25 0.00e+00 2208.00
IUUC-Cin-025133 Ciona intestinalis 36.44 0.00e+00 691.00
IUUC-Csv-025816 Ciona savignyi 34.57 0.00e+00 997.00
IUUC-Dre-028823 Danio rerio 46.43 0.00e+00 1578.00
IUUC-Dno-029211 Dasypus novemcinctus 71.97 0.00e+00 892.00
IUUC-Dor-030211 Dipodomys ordii 67.29 0.00e+00 1241.00
IUUC-Ete-032363 Echinops telfairi 55.49 0.00e+00 847.00
IUUC-Eca-034296 Equus caballus 70.06 0.00e+00 2295.00
IUUC-Eeu-035226 Erinaceus europaeus 55.12 0.00e+00 795.00
IUUC-Fca-035384 Felis catus 69.36 0.00e+00 2350.00
IUUC-Fal-037660 Ficedula albicollis 53.92 0.00e+00 1694.00
IUUC-Gga-040666 Gallus gallus 53.62 0.00e+00 1254.00
IUUC-Gac-041358 Gasterosteus aculeatus 45.84 0.00e+00 1486.00
IUUC-Ggo-045121 Gorilla gorilla 67.14 0.00e+00 2259.00
IUUC-Hsa-046289 Homo sapiens 67.27 0.00e+00 2210.00
IUUC-Itr-048485 Ictidomys tridecemlineatus 65.32 0.00e+00 2100.00
IUUC-Lch-050009 Latimeria chalumnae 47.07 0.00e+00 1593.00
IUUC-Loc-052629 Lepisosteus oculatus 46.15 0.00e+00 824.00
IUUC-Mcc-055834 Macaca mulatta 63.69 0.00e+00 1196.00
IUUC-Meu-056162 Macropus eugenii 55.73 0.00e+00 761.00
IUUC-Mga-060167 Meleagris gallopavo 50.98 0.00e+00 1533.00
IUUC-Mmr-060761 Microcebus murinus 73.68 5.00e-132 463.00
IUUC-Mdo-061886 Monodelphis domestica 55.48 0.00e+00 2018.00
IUUC-Mmu-063652 Mus musculus 64.52 0.00e+00 2221.00
IUUC-Mlu-068141 Myotis lucifugus 69.67 0.00e+00 2381.00
IUUC-Nle-069133 Nomascus leucogenys 67.59 0.00e+00 1285.00
IUUC-Ont-072496 Oreochromis niloticus 46.81 0.00e+00 1635.00
IUUC-Oan-072833 Ornithorhynchus anatinus 49.61 0.00e+00 838.00
IUUC-Ola-086564 Oryzias latipes 45.81 0.00e+00 1524.00
IUUC-Oga-088919 Otolemur garnettii 64.70 0.00e+00 2151.00
IUUC-Oar-089946 Ovis aries 76.90 0.00e+00 967.00
IUUC-Ptr-090755 Pan troglodytes 66.88 0.00e+00 1865.00
IUUC-Pan-092054 Papio anubis 67.05 0.00e+00 2202.00
IUUC-Psi-093467 Pelodiscus sinensis 55.41 0.00e+00 1900.00
IUUC-Pma-094573 Petromyzon marinus 40.63 0.00e+00 1274.00
IUUC-Pfo-096849 Poecilia formosa 45.06 0.00e+00 1420.00
IUUC-Pab-098320 Pongo abelii 65.19 0.00e+00 1961.00
IUUC-Pca-100172 Procavia capensis 59.44 0.00e+00 1148.00
IUUC-Pva-102772 Pteropus vampyrus 70.21 0.00e+00 1348.00
IUUC-Rno-105046 Rattus norvegicus 65.45 0.00e+00 2261.00
IUUC-Sha-107094 Sarcophilus harrisii 56.11 0.00e+00 2071.00
IUUC-Tgu-117323 Taeniopygia guttata 52.15 0.00e+00 1426.00
IUUC-Tru-118717 Takifugu rubripes 44.31 0.00e+00 1464.00
IUUC-Tni-120108 Tetraodon nigroviridis 45.43 0.00e+00 860.00
IUUC-Ttr-128378 Tursiops truncatus 80.28 0.00e+00 1032.00
IUUC-Xtr-131760 Xenopus tropicalis 49.33 0.00e+00 1662.00
Created Date 25-Jun-2017

https://dev.news.makassarkota.go.id/public/pgsoft-demo/ https://jdih.sumbawabaratkab.go.id/lato/pg-soft-demo/ https://dev.news.makassarkota.go.id/public/slot-gacor/ http://pbb.tanahbumbukab.go.id/-/slot-gacor/ slot gacor https://siakad.unipra.ac.id/sass/slot-gacor-x500/ http://kpm.dinus.ac.id/assets/images/berita/slot/
Copyright © 2004-2017.The CUCKOO Workgroup. All Rights Reserved