iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Cja-019905

Ensembl Protein ID

ENSCJAP00000009310.2

UniProt Accession

F7D6I8; F7D6I8_CALJA

Genbank Protein ID

JAB03106.1; JAB24942.1

Protein Name

Laminin subunit gamma-2 isoform a

Genbank Nucleotide ID

ACFV01050809; GAMR01008990

Gene Name

LAMC2

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSCJAG00000005053.2	ENSCJAT00000009838.2	ENSCJAP00000009310.2
ENSCJAG00000005053.2	ENSCJAT00000060119.1	ENSCJAP00000047369.1
ENSCJAG00000005053.2	ENSCJAT00000009825.2	ENSCJAP00000009297.2

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 adaptor/Cullin RING/SCF/F-box	26.47	1.00e-03	33.50	IUUC-Ots-000048

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Callithrix jacchus

Protein Sequence
(Fasta)

MPALWLGCCL CFSLLLPAGR ATSRREVCDC NGKSRQCIFD QELHRQTGHG FRCLNCNDNT 60
DGIHCERCKD GFYRHRERDR CLPCNCNSKG SLSARCDNSG RCSCKPGVTG SRCDRCLPGF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTTGGCCCGG GCCAGGTGTG CGCCCTCCTC GCGGCGAGGG GGAGCAGGCG GCTGCGGGGA 60
GCGCGTTTCC AGCCCCGTGT GTGCTGCGTG TGTTTGTCAG CCTCTGGAGG GCTGGGTCCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1015--Disulfide bond
KW-0424--Laminin EGF-like domain
KW-1185--Reference proteome
KW-0677--Repeat
KW-0732--Signal

Interpro

IPR000742--EGF-like_dom
IPR002049--Laminin_EGF
IPR031082--Laminin_gamma
IPR000034--Laminin_IV

PROSITE

PS01248--EGF_LAM_1
PS50027--EGF_LAM_2
PS51115--LAMININ_IVA

Pfam

PF00052--Laminin_B
PF00053--Laminin_EGF

SMART

SM00181--EGF
SM00180--EGF_Lam
SM00281--LamB

Gene Ontology

GO:0005604--C:basement membrane
GO:0070831--P:basement membrane assembly
GO:0030335--P:positive regulation of cell migration
GO:0008284--P:positive regulation of cell proliferation
GO:0048731--P:system development

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001695	Ailuropoda melanoleuca	84.25	0.00e+00	2016.00
IUUC-Bta-012314	Bos taurus	84.83	0.00e+00	2033.00
IUUC-Dno-029412	Dasypus novemcinctus	84.84	0.00e+00	2026.00
IUUC-Eca-033592	Equus caballus	86.11	0.00e+00	2078.00
IUUC-Fca-036438	Felis catus	84.53	0.00e+00	1978.00
IUUC-Mcc-054808	Macaca mulatta	27.04	8.00e-03	38.10
IUUC-Mpu-065707	Mustela putorius furo	82.30	0.00e+00	1951.00
IUUC-Oar-089341	Ovis aries	83.73	0.00e+00	2013.00
IUUC-Pan-092711	Papio anubis	26.73	8.00e-03	37.70

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence