iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ocu-074208

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AAGW02070289

Gene Name

RNF5

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSOCUG00000016417.3	ENSOCUT00000016412.3	ENSOCUP00000014108.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.60e-07	31.1	25	66

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C iCle  ++  +v  CgH+++  Cl++w         ++ CP+C+
   Q: 25   CNICLETARE-AVVSVCGHLYCWPCLHQW---LETRPERQECPVCK 66
           99******88.888***************...555888889****7 PP

Organism

Oryctolagus cuniculus

Protein Sequence
(Fasta)

SRRGGGRGPE GPNREGGGAG ATFECNICLE TAREAVVSVC GHLYCWPCLH QWLETRPERQ 60
ECPVCKAGIS RETVVPLYGR GSQKPQDPRL KTPPRPQGQR PAPESRGGFQ PFGDTGGFHF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCTGGGGCGA CACCGGACGG GCCATGGCAG CCGCCGAGGA GGAGGACGGG GGCCCGAAGG 60
GCCAAACCGC GAGGGGGGCG GGGCGGGCGC GACCTTCGAA TGTAATATAT GTTTGGAGAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

SMART

SM00184--RING

Gene Ontology

GO:0036513--C:Derlin-1 retrotranslocation complex
GO:0016021--C:integral component of membrane
GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding
GO:0071712--P:ER-associated misfolded protein catabolic process
GO:0010507--P:negative regulation of autophagy
GO:0031648--P:protein destabilization
GO:0070936--P:protein K48-linked ubiquitination
GO:0070534--P:protein K63-linked ubiquitination
GO:2000785--P:regulation of autophagosome assembly
GO:0009617--P:response to bacterium

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001155	Aegilops tauschii	47.57	4.00e-23	101.00
IUUC-Aml-001417	Ailuropoda melanoleuca	95.35	1.00e-69	254.00
IUUC-Atr-002444	Amborella trichopoda	45.90	4.00e-25	107.00
IUUC-Aca-004254	Anolis carolinensis	74.70	8.00e-34	135.00
IUUC-Aly-006065	Arabidopsis lyrata	54.12	4.00e-24	104.00
IUUC-Ath-007401	Arabidopsis thaliana	52.87	1.00e-23	102.00
IUUC-Ame-011316	Astyanax mexicanus	77.60	2.00e-55	208.00
IUUC-Bta-013109	Bos taurus	97.87	1.00e-78	285.00
IUUC-Bdi-014313	Brachypodium distachyon	53.49	5.00e-23	100.00
IUUC-Bol-016132	Brassica oleracea	42.86	2.00e-26	112.00
IUUC-Bra-017631	Brassica rapa	47.71	4.00e-26	111.00
IUUC-Cel-018228	Caenorhabditis elegans	54.40	6.00e-32	130.00
IUUC-Cja-019902	Callithrix jacchus	96.45	3.00e-77	280.00
IUUC-Cfa-020079	Canis familiaris	96.45	3.00e-77	280.00
IUUC-Cpo-021320	Cavia porcellus	91.72	3.00e-80	290.00
IUUC-Cre-022829	Chlamydomonas reinhardtii	53.41	8.00e-24	101.00
IUUC-Csa-023595	Chlorocebus sabaeus	96.45	1.00e-77	281.00
IUUC-Cme-027164	Cyanidioschyzon merolae	32.24	3.00e-16	79.00
IUUC-Dre-027716	Danio rerio	73.33	6.00e-42	163.00
IUUC-Dno-029843	Dasypus novemcinctus	85.11	6.00e-55	206.00
IUUC-Dor-030170	Dipodomys ordii	96.77	7.00e-68	249.00
IUUC-Eca-033642	Equus caballus	97.40	3.00e-85	307.00
IUUC-Eeu-034778	Erinaceus europaeus	97.44	4.00e-63	232.00
IUUC-Fca-036326	Felis catus	95.74	2.00e-77	281.00
IUUC-Fso-038195	Fusarium solani	37.50	2.00e-10	60.10
IUUC-Gac-042258	Gasterosteus aculeatus	78.40	2.00e-54	204.00
IUUC-Ggo-045474	Gorilla gorilla	97.16	6.00e-78	282.00
IUUC-Hsa-046046	Homo sapiens	97.16	4.00e-78	283.00
IUUC-Hvu-047124	Hordeum vulgare	53.49	7.00e-23	100.00
IUUC-Itr-048037	Ictidomys tridecemlineatus	96.67	2.00e-82	297.00
IUUC-Lch-050367	Latimeria chalumnae	72.73	3.00e-45	173.00
IUUC-Lpe-051034	Leersia perrieri	44.53	4.00e-25	107.00
IUUC-Lma-053179	Leptosphaeria maculans	38.33	3.00e-10	59.30
IUUC-Laf-053395	Loxodonta africana	96.45	3.00e-77	280.00
IUUC-Mcc-054833	Macaca mulatta	96.45	1.00e-77	281.00
IUUC-Meu-055984	Macropus eugenii	83.54	1.00e-34	138.00
IUUC-Mtr-058096	Medicago truncatula	52.81	1.00e-24	106.00
IUUC-Mdo-062437	Monodelphis domestica	86.93	1.00e-75	275.00
IUUC-Mmu-064159	Mus musculus	96.48	2.00e-78	284.00
IUUC-Mac-065053	Musa acuminata	56.47	4.00e-23	101.00
IUUC-Mlu-067689	Myotis lucifugus	90.62	2.00e-80	290.00
IUUC-Nle-069705	Nomascus leucogenys	97.16	4.00e-78	283.00
IUUC-Opr-070392	Ochotona princeps	43.97	2.00e-20	91.30
IUUC-Ont-072482	Oreochromis niloticus	72.73	9.00e-57	212.00
IUUC-Oba-075461	Oryza barthii	51.06	4.00e-24	105.00
IUUC-Obr-076382	Oryza brachyantha	55.81	3.00e-24	104.00
IUUC-Ogl-077553	Oryza glaberrima	55.79	8.00e-26	110.00
IUUC-Ogu-078463	Oryza glumaepatula	55.79	6.00e-26	110.00
IUUC-Oin-080177	Oryza indica	55.79	8.00e-26	110.00
IUUC-Olo-080378	Oryza longistaminata	53.49	6.00e-23	100.00
IUUC-Ome-081605	Oryza meridionalis	55.79	7.00e-26	110.00
IUUC-Oni-082458	Oryza nivara	55.79	2.00e-25	110.00
IUUC-Opu-083362	Oryza punctata	56.98	6.00e-25	107.00
IUUC-Oru-084757	Oryza rufipogon	54.55	3.00e-26	111.00
IUUC-Osa-086198	Oryza sativa	54.55	3.00e-26	112.00
IUUC-Ola-086507	Oryzias latipes	71.34	1.00e-59	222.00
IUUC-Olu-087623	Ostreococcus lucimarinus	49.25	2.00e-16	78.60
IUUC-Oga-088912	Otolemur garnettii	97.87	1.00e-78	284.00
IUUC-Oar-090284	Ovis aries	97.62	9.00e-70	255.00
IUUC-Ptr-090919	Pan troglodytes	96.83	7.00e-69	252.00
IUUC-Pan-092843	Papio anubis	96.45	1.00e-77	281.00
IUUC-Ppa-095474	Physcomitrella patens	53.41	1.00e-24	106.00
IUUC-Pfo-096818	Poecilia formosa	77.78	4.00e-55	207.00
IUUC-Pab-098244	Pongo abelii	96.45	1.00e-77	281.00
IUUC-Pop-099595	Populus trichocarpa	50.43	1.00e-26	112.00
IUUC-Pca-100319	Procavia capensis	96.48	3.00e-78	283.00
IUUC-Ppe-101752	Prunus persica	54.65	3.00e-24	105.00
IUUC-Pva-102249	Pteropus vampyrus	92.20	3.00e-71	260.00
IUUC-Pte-104170	Pyrenophora teres	37.29	3.00e-09	56.20
IUUC-Pyt-104531	Pyrenophora triticirepentis	38.33	8.00e-10	57.80
IUUC-Rno-106042	Rattus norvegicus	96.48	2.00e-78	284.00
IUUC-Smo-109079	Selaginella moellendorffii	56.92	1.00e-21	97.80
IUUC-Sit-110690	Setaria italica	52.38	1.00e-21	95.90
IUUC-Sly-110917	Solanum lycopersicum	46.67	1.00e-24	105.00
IUUC-Stu-112801	Solanum tuberosum	56.47	2.00e-23	102.00
IUUC-Sbi-114275	Sorghum bicolor	53.49	1.00e-22	99.80
IUUC-Ssc-115934	Sus scrofa	97.87	1.00e-78	284.00
IUUC-Tru-118679	Takifugu rubripes	60.49	1.00e-22	98.20
IUUC-Tsy-119615	Tarsius syrichta	96.12	3.00e-70	256.00
IUUC-Tca-121830	Theobroma cacao	47.97	7.00e-25	107.00
IUUC-Tae-124319	Triticum aestivum	47.57	8.00e-23	100.00
IUUC-Tur-126198	Triticum urartu	47.57	6.00e-23	100.00
IUUC-Tbe-127773	Tupaia belangeri	95.04	9.00e-75	272.00
IUUC-Ttr-128690	Tursiops truncatus	95.73	3.00e-62	230.00
IUUC-Vvi-131225	Vitis vinifera	58.82	3.00e-25	107.00
IUUC-Xtr-132608	Xenopus tropicalis	80.00	4.00e-45	173.00
IUUC-Xma-134225	Xiphophorus maculatus	77.78	3.00e-55	207.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence