iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress
DNA & RNA Element
RAID2
Protein-protein Interaction
IID	iRefIndex	PINA	Mentha
Post-translational Modifications (PTMs)
dbPAF	PHOSIDA
Protein Expression/Proteomics
GPMDB

Status

Reviewed

Details

Family	Domain	References (PMIDs)
ULD/UDP/UBQ/UBQ_Other	UBQ_Other	18211821

Classification

Family	E-value	Score	Start	End
ULD/UDP/UBQ/UBQ_Other	5.80e-16	58.2	1	74

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UBQ/UBQ_Other

   S: 1    vqvtvksldgseltlkvnpsdtVaeLKekiekklgippeqqrLiykGkiLeddktLady.glkdgstihllekk 73
           +q+t+k l+g+++t++v p++t++e+K +ie +l i +  q+L++ G++L + +t+a+y ++k+g+++ l++ k
   Q: 1    MQITIKVLKGKDCTIEVAPTSTILEVKHQIEAELQISATNQKLLLLGRPLNNEQTIASYpNIKEGTKLNLVVIK 74
           79********************************************************************9866 PP

Organism

Drosophila melanogaster

Protein Sequence
(Fasta)

MQITIKVLKG KDCTIEVAPT STILEVKHQI EAELQISATN QKLLLLGRPL NNEQTIASYP 60
NIKEGTKLNL VVIKPCLRDS ILRGFRKHYS EPLAERMTNE FMADFERKIN EQSLDDLERL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCAATACAGG TGGCAACGCC AAAGACAGAT TGTTTATATC GCTCGACTTC TCGAGTTTGA 60
CTTTTAATTT TTTAATAAAT TTTACGGCAA TTGCTATGCA GATAACAATC AAGGTGCTGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome

Interpro

IPR029071--Ubiquitin-rel_dom
IPR000626--Ubiquitin_dom

PROSITE

PS50053--UBIQUITIN_2

Pfam

PF00240--ubiquitin

SMART

SM00213--UBQ

KEGG

dme:Dmel_CG7215

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aca-005306	Anolis carolinensis	27.78	6.00e-15	72.40
IUUC-Bta-012447	Bos taurus	26.67	3.00e-12	63.90
IUUC-Cja-018762	Callithrix jacchus	26.81	3.00e-10	57.00
IUUC-Cfa-020432	Canis familiaris	23.97	1.00e-10	58.50
IUUC-Dre-028189	Danio rerio	30.82	4.00e-14	69.70
IUUC-Dor-030848	Dipodomys ordii	30.77	7.00e-14	69.30
IUUC-Fca-035600	Felis catus	24.67	8.00e-11	58.90
IUUC-Gmo-038655	Gadus morhua	30.14	3.00e-13	66.60
IUUC-Gac-041809	Gasterosteus aculeatus	27.45	8.00e-12	62.40
IUUC-Loc-051925	Lepisosteus oculatus	30.66	2.00e-13	67.40
IUUC-Laf-053420	Loxodonta africana	25.81	8.00e-12	62.00
IUUC-Mcc-055841	Macaca mulatta	29.79	2.00e-12	64.30
IUUC-Mmr-061224	Microcebus murinus	26.57	1.00e-10	58.20
IUUC-Mmu-063667	Mus musculus	27.52	9.00e-12	62.00
IUUC-Mlu-067611	Myotis lucifugus	24.67	7.00e-12	62.40
IUUC-Opr-070425	Ochotona princeps	27.69	4.00e-12	62.80
IUUC-Ocu-074452	Oryctolagus cuniculus	29.33	3.00e-13	66.60
IUUC-Ola-086473	Oryzias latipes	30.22	2.00e-13	67.80
IUUC-Oga-088650	Otolemur garnettii	26.39	1.00e-10	58.20
IUUC-Pan-092760	Papio anubis	29.33	4.00e-13	67.00
IUUC-Pfo-096839	Poecilia formosa	29.66	2.00e-13	67.40
IUUC-Rno-104898	Rattus norvegicus	27.08	1.00e-11	61.60
IUUC-Xtr-131815	Xenopus tropicalis	36.76	3.00e-19	86.70

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence