iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Stu-112744

Ensembl Protein ID

PGSC0003DMT400088760

UniProt Accession

M1DGN3; M1DGN3_SOLTU

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PGSC0003DMG400038331	PGSC0003DMT400088760	PGSC0003DMT400088760

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.80e-47	157.8	407	445
UBD/Beta-Prp	1.30e-76	258.9	147	318

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           gH ++v+++af ++  +l+sGs D+ + +W++++ + +k
   Q: 407  GHREPVYSVAFcPNgEYLASGSLDKCMNIWSVKEAKIVK 445
           8***********777****************99887766 PP

UBD/Beta-Prp

   S: 86   cvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqclee............tlsghdgvvncvvvhpdgnllvsGslDrtvr 162
            v++l+gh+++v  +++sp+g+ l+sGs d t+r+w +  g c ++              +++++ v+++ ++++gnll++Gs+D+  r
   Q: 147  DVMVLEGHTSEVFVCAWSPEGSLLASGSGDATARIWTIGDGPCNSTipnvlvlnhlesQATEENKDVTSLDWNSKGNLLATGSYDGGAR 235
           5899****************************************************999999999************************ PP
   S: 163  lWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiri 248
           +W+  +g+l+ tl + h++++  l+++++g +l+sgs+d+t  +w++++ge  +++  h+ + ++v+   n++ +++ ssD+ i++
   Q: 236  IWKR-SGELVSTLNK-HKGPIIALKWNKKGDYLLSGSTDTTAVIWNVKSGESKQQFDFHSGPLLDVAWR-NNNSFATSSSDNMIYV 318
           **65.********99.*************************************************9988.9999999999*99975 PP

Organism

Solanum tuberosum

Protein Sequence
(Fasta)

MASLTSEFLN FIVFRYLFES GFTHSAFTFG YEAGLNRSTM DGHLVPPGAL IQFVQKGIQY 60
LELETNLSND DADMDEDFKL LEPLDLITKD VDELRKIIKE KKEKVQKDKP TRKDKASADH 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCCTCTT TAACTTCTGA GTTCCTCAAT TTCATTGTTT TCCGCTACCT CTTTGAATCA 60
GGTAATTTAA TTCTCATCTT CAGAACCTGT TCTATCTATC CAAGTTTAAT TGATGTTGTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR006594--LisH
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50896--LISH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08513--LisH
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00667--LisH
SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001717	Ailuropoda melanoleuca	49.03	3.00e-135	473.00
IUUC-Aca-004611	Anolis carolinensis	49.81	9.00e-136	475.00
IUUC-Bta-012418	Bos taurus	49.51	6.00e-142	496.00
IUUC-Cfa-020029	Canis familiaris	49.03	3.00e-135	474.00
IUUC-Cpo-022080	Cavia porcellus	47.43	4.00e-126	443.00
IUUC-Cho-024872	Choloepus hoffmanni	38.14	2.00e-35	142.00
IUUC-Cne-026946	Cryptococcus neoformans	31.28	3.00e-25	109.00
IUUC-Cme-027258	Cyanidioschyzon merolae	38.38	2.00e-104	371.00
IUUC-Dno-029196	Dasypus novemcinctus	49.03	7.00e-136	476.00
IUUC-Fca-035734	Felis catus	49.22	8.00e-136	476.00
IUUC-Fal-037185	Ficedula albicollis	49.52	2.00e-135	474.00
IUUC-Gmo-038870	Gadus morhua	50.59	3.00e-143	500.00
IUUC-Ggo-044882	Gorilla gorilla	49.22	3.00e-135	474.00
IUUC-Hsa-046488	Homo sapiens	49.22	3.00e-135	474.00
IUUC-Loc-052030	Lepisosteus oculatus	49.23	5.00e-143	499.00
IUUC-Laf-054280	Loxodonta africana	49.71	1.00e-141	495.00
IUUC-Mcc-055203	Macaca mulatta	49.22	7.00e-135	473.00
IUUC-Mdo-062078	Monodelphis domestica	48.30	2.00e-135	474.00
IUUC-Mmu-063603	Mus musculus	49.24	2.00e-137	481.00
IUUC-Mpu-066741	Mustela putorius furo	49.03	3.00e-135	474.00
IUUC-Mlu-068152	Myotis lucifugus	49.12	6.00e-137	479.00
IUUC-Nle-069229	Nomascus leucogenys	49.22	3.00e-135	474.00
IUUC-Ont-071569	Oreochromis niloticus	49.32	1.00e-143	502.00
IUUC-Oba-075618	Oryza barthii	58.09	3.00e-178	616.00
IUUC-Opu-083505	Oryza punctata	57.77	4.00e-179	619.00
IUUC-Ptr-091532	Pan troglodytes	49.22	3.00e-135	474.00
IUUC-Pan-091927	Papio anubis	49.22	3.00e-135	474.00
IUUC-Pma-094105	Petromyzon marinus	42.03	3.00e-56	211.00
IUUC-Pfo-097214	Poecilia formosa	50.88	4.00e-137	480.00
IUUC-Pab-098705	Pongo abelii	49.22	3.00e-135	474.00
IUUC-Rno-105411	Rattus norvegicus	49.71	2.00e-137	481.00
IUUC-Smo-109205	Selaginella moellendorffii	64.84	3.00e-145	507.00
IUUC-Sly-111540	Solanum lycopersicum	76.78	0.00e+00	807.00
IUUC-Sar-112971	Sorex araneus	44.71	1.00e-121	428.00
IUUC-Sre-115175	Sporisorium reilianum	41.94	7.00e-53	201.00
IUUC-Tni-120861	Tetraodon nigroviridis	51.19	9.00e-144	502.00
IUUC-Uma-129469	Ustilago maydis	40.07	7.00e-53	201.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence