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Basic Information Integrated Annotations
Tag Content
iUUCD ID IUUC-Mmu-064346
Ensembl Protein ID ENSMUSP00000047334.6
UniProt Accession Q8C761; Q3UNM4; WDR60_MOUSE
Genbank Protein ID BAC35011.1; BAE25723.1
Protein Name WD repeat-containing protein 60
Genbank Nucleotide ID AK052482; AK144138
Gene Name Wdr60
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSMUSG00000042050.7 ENSMUST00000039349.6 ENSMUSP00000047334.6
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEOArrayExpressGXD
DNA & RNA Element
AREsitemicroRNATRANSFACRepTar
RAID2
Protein-protein Interaction
IID
Post-translational Modifications (PTMs)
dbPAFPhosphositePlusdbPTM
Protein Expression/Proteomics
GPMDB
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 4.60e-07 31.0 639 673
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD
   S: 3    tdsvtclaf..sd.tllvsGsdDgtikvWDlrtgv 34
           +++vtc++f      ll +G+  g++ vWDlr++ 
   Q: 639  ESKVTCCCFspLKaFLLFAGTVHGSVVVWDLREDS 673
           589******7622346999************9875 PP
   
Organism Mus musculus
Functional Description
(View)

Functional Description


     May play a role in ciliogenesis.
 May play a role in ciliogenesis.
Protein Sequence
(Fasta)
MEPGKRRTKD DTWKADDLRK HLKVQSGSPK EEKKLREKKA HKDSESAAPE YREHKSRDPD 60
REARHKEKTA ERDLYTSTEH PRGERDRERH KERRKDAKDR EKDKLKERHR DQEAEKAHSR 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Mmu-064346|E3,WD_repeat|Mus musculus
Please wait for a moment...
Nucleotide Sequence
(Fasta)
TTCGGCCCGT TGCTAGGAGG CGGGGACGCC GGCCCTCCTG GGACCCAAGT CGCAGCAGGC 60
CTGGCTGGCT GGTAGAGCTG AGCGACGGCG GGTTTATCTT CCTCCGGTGG CCCGCGCCTG 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Mmu-064346|E3,WD_repeat|Mus musculus
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0966--Cell projection
KW-0969--Cilium
KW-0970--Cilium biogenesis/degradation
KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0597--Phosphoprotein
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat
Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom
Pfam

PF00400--WD40
SMART

SM00320--WD40
Gene Ontology

GO:0097546--C:ciliary base
GO:0005929--C:cilium
GO:0005868--C:cytoplasmic dynein complex
GO:0070062--C:extracellular exosome
GO:0005615--C:extracellular space
GO:0031021--C:interphase microtubule organizing center
GO:0000242--C:pericentriolar material
GO:0000922--C:spindle pole
GO:0060271--P:cilium assembly
GO:0048704--P:embryonic skeletal system morphogenesis
KEGG mmu:217935
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Aml-001741 Ailuropoda melanoleuca 66.26 0.00e+00 1214.00
IUUC-Apl-003689 Anas platyrhynchos 58.26 0.00e+00 798.00
IUUC-Aca-004966 Anolis carolinensis 58.07 0.00e+00 752.00
IUUC-Ame-011562 Astyanax mexicanus 41.91 3.00e-74 273.00
IUUC-Bta-013100 Bos taurus 62.61 0.00e+00 1126.00
IUUC-Cja-019521 Callithrix jacchus 64.21 0.00e+00 1143.00
IUUC-Cfa-020943 Canis familiaris 63.87 0.00e+00 1102.00
IUUC-Cho-024500 Choloepus hoffmanni 73.17 0.00e+00 829.00
IUUC-Dre-028530 Danio rerio 46.96 2.00e-176 613.00
IUUC-Dno-029442 Dasypus novemcinctus 75.06 0.00e+00 1105.00
IUUC-Eca-033951 Equus caballus 78.81 0.00e+00 1104.00
IUUC-Fca-036542 Felis catus 65.18 0.00e+00 1115.00
IUUC-Fal-037079 Ficedula albicollis 56.60 0.00e+00 736.00
IUUC-Gac-041396 Gasterosteus aculeatus 47.17 2.00e-159 556.00
IUUC-Ggo-045638 Gorilla gorilla 77.49 0.00e+00 1046.00
IUUC-Hsa-046371 Homo sapiens 80.36 0.00e+00 1102.00
IUUC-Itr-049031 Ictidomys tridecemlineatus 77.16 0.00e+00 1031.00
IUUC-Lch-049862 Latimeria chalumnae 51.29 0.00e+00 695.00
IUUC-Loc-052637 Lepisosteus oculatus 49.10 1.00e-164 573.00
IUUC-Laf-053470 Loxodonta africana 70.47 0.00e+00 1232.00
IUUC-Mcc-055753 Macaca mulatta 79.91 0.00e+00 1130.00
IUUC-Mga-059230 Meleagris gallopavo 51.40 0.00e+00 718.00
IUUC-Mmr-061703 Microcebus murinus 69.22 0.00e+00 959.00
IUUC-Mpu-066650 Mustela putorius furo 66.80 0.00e+00 1071.00
IUUC-Nle-069413 Nomascus leucogenys 78.43 0.00e+00 1073.00
IUUC-Opr-071033 Ochotona princeps 74.93 0.00e+00 1055.00
IUUC-Ont-071388 Oreochromis niloticus 46.61 1.00e-169 590.00
IUUC-Oan-072714 Ornithorhynchus anatinus 49.68 0.00e+00 906.00
IUUC-Ocu-074557 Oryctolagus cuniculus 69.38 0.00e+00 1112.00
IUUC-Oga-088938 Otolemur garnettii 68.74 0.00e+00 1195.00
IUUC-Oar-090053 Ovis aries 60.16 0.00e+00 817.00
IUUC-Pan-091852 Papio anubis 80.76 0.00e+00 1033.00
IUUC-Psi-093781 Pelodiscus sinensis 59.94 0.00e+00 780.00
IUUC-Pfo-096078 Poecilia formosa 42.79 9.00e-147 514.00
IUUC-Pab-097947 Pongo abelii 80.21 0.00e+00 1102.00
IUUC-Rno-105970 Rattus norvegicus 93.61 0.00e+00 1600.00
IUUC-Tgu-117448 Taeniopygia guttata 56.02 0.00e+00 717.00
IUUC-Tni-120297 Tetraodon nigroviridis 44.84 2.00e-154 539.00
IUUC-Xtr-132946 Xenopus tropicalis 51.48 0.00e+00 647.00
Created Date 25-Jun-2017

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