iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Kpa-049257

Ensembl Protein ID

CAY67509

UniProt Accession

C4QW86; C4QW86_KOMPG

Genbank Protein ID

CAY67509.1

Protein Name

Cytoplasmic protein with a role in regulation of Ty1 transposition

Genbank Nucleotide ID

FN392319

Gene Name

PAS_chr1-1_0145

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PAS_chr1-1_0145	CAY67509	CAY67509

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.50e-29	98.2	179	217
UBD/Beta-Prp	5.00e-41	138.8	144	324

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           gH++s+++++  ++  l+vs+sdD ++kvWDl +g +l 
   Q: 179  GHEGSIFGVQAdTNgELVVSCSDDRSVKVWDLESGECLM 217
           8********999556*********************986 PP

UBD/Beta-Prp

   S: 15   cvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklvsGshd 115
           ++ + pdk ++ +g   + i +wd+++ ++++ l+ghe+ +  v+ + +g++ v++s+Dr +kvwdl++g+c+++  gh ++++sl+f+ ++ k+ s+s+d
   Q: 144  SIRVLPDKVIVCAGTVMSGILLWDLSSRSVIHNLKGHEGSIFGVQADTNGELVVSCSDDRSVKVWDLESGECLMSGWGHGARIWSLQFYDNNTKVFSASED 244
           5677899999999999************************************************************************************* PP
   S: 116  rtirvwdletgqclee....tlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsng 192
            t+r w ++ ++   +    +++   + ++++++++d+ + ++G++D+ +rl dl+++   + +++  + sv s+s +  +
   Q: 245  CTARSWAVDREKGELKclkvFDTHYGKHIWGAAISQDELIAATGGADGRIRLVDLNSKLARKGFQE-LEFSVDSISKSTGS 324
           ********988765555664666667789**************************99988888988.88888888855444 PP

Organism

Komagataella pastoris

Protein Sequence
(Fasta)

MEDFGPVVRY GPITALQFKD GKLYSGNGPS IEVYDYVTGE MVGQRTVFKD NRVHGLQGSN 60
DGSSVAIHGA KSLLISRWDH LFDEERTLDE FFVSDWIIST SFSYDNSLLY VLTAHNAVLV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAAGATT TTGGCCCAGT AGTCCGCTAT GGACCGATAA CAGCTCTTCA GTTTAAAGAC 60
GGAAAACTTT ACTCTGGAAA CGGGCCTTCC ATTGAAGTGT ATGACTATGT GACAGGAGAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR011041--Quinoprot_gluc/sorb_DH
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0003824--F:catalytic activity

KEGG

ppa:PAS_chr1-1_0145

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000976	Aegilops tauschii	31.69	2.00e-12	66.20
IUUC-Aml-001786	Ailuropoda melanoleuca	21.67	7.00e-35	140.00
IUUC-Atr-003053	Amborella trichopoda	23.77	2.00e-18	86.30
IUUC-Apl-003178	Anas platyrhynchos	23.38	4.00e-19	87.40
IUUC-Aca-004886	Anolis carolinensis	27.01	3.00e-24	105.00
IUUC-Aly-005509	Arabidopsis lyrata	22.54	3.00e-25	108.00
IUUC-Ath-007109	Arabidopsis thaliana	22.66	7.00e-27	114.00
IUUC-Ago-007817	Ashbya gossypii	35.37	1.00e-165	575.00
IUUC-Acl-008020	Aspergillus clavatus	25.42	8.00e-76	276.00
IUUC-Afl-008608	Aspergillus flavus	27.72	9.00e-49	186.00
IUUC-Afu-009035	Aspergillus fumigatus	26.20	2.00e-77	282.00
IUUC-Ani-009359	Aspergillus nidulans	26.07	8.00e-77	280.00
IUUC-Ang-009692	Aspergillus niger	25.59	3.00e-74	271.00
IUUC-Aor-010056	Aspergillus oryzae	26.20	4.00e-78	284.00
IUUC-Ate-010299	Aspergillus terreus	25.52	1.00e-71	263.00
IUUC-Ame-011051	Astyanax mexicanus	21.88	2.00e-27	115.00
IUUC-Bgr-012077	Blumeria graminis	30.62	6.00e-49	187.00
IUUC-Bta-012793	Bos taurus	21.76	1.00e-37	149.00
IUUC-Bci-013679	Botrytis cinerea	26.84	8.00e-78	283.00
IUUC-Bdi-014401	Brachypodium distachyon	26.22	2.00e-21	95.90
IUUC-Bol-015628	Brassica oleracea	23.45	1.00e-19	90.50
IUUC-Bra-017446	Brassica rapa	22.39	2.00e-21	95.90
IUUC-Cja-018910	Callithrix jacchus	21.80	9.00e-40	157.00
IUUC-Cfa-021260	Canis familiaris	21.52	4.00e-36	144.00
IUUC-Cpo-022205	Cavia porcellus	21.61	4.00e-41	161.00
IUUC-Csa-023510	Chlorocebus sabaeus	21.29	2.00e-39	155.00
IUUC-Cgl-026380	Colletotrichum gloeosporioides	26.52	2.00e-50	191.00
IUUC-Dre-028004	Danio rerio	27.01	3.00e-23	102.00
IUUC-Dno-029804	Dasypus novemcinctus	21.05	2.00e-37	149.00
IUUC-Dor-030512	Dipodomys ordii	22.95	8.00e-22	97.40
IUUC-Dme-032047	Drosophila melanogaster	20.85	3.00e-24	105.00
IUUC-Ete-033076	Echinops telfairi	25.97	3.00e-16	79.00
IUUC-Eca-033727	Equus caballus	21.10	2.00e-29	122.00
IUUC-Eeu-035210	Erinaceus europaeus	21.20	7.00e-32	130.00
IUUC-Fca-035433	Felis catus	21.27	5.00e-36	144.00
IUUC-Fal-036807	Ficedula albicollis	21.69	8.00e-25	106.00
IUUC-Fox-037749	Fusarium oxysporum	28.17	3.00e-75	275.00
IUUC-Fso-038164	Fusarium solani	28.40	2.00e-81	295.00
IUUC-Gmo-039180	Gadus morhua	22.01	9.00e-26	110.00
IUUC-Ggr-039801	Gaeumannomyces graminis	27.92	4.00e-22	98.60
IUUC-Gga-040482	Gallus gallus	22.50	6.00e-18	84.70
IUUC-Gac-042066	Gasterosteus aculeatus	26.67	8.00e-16	77.40
IUUC-Gma-042704	Glycine max	26.29	2.00e-19	89.40
IUUC-Ggo-044942	Gorilla gorilla	21.38	2.00e-38	152.00
IUUC-Hsa-046408	Homo sapiens	21.36	2.00e-39	155.00
IUUC-Itr-048756	Ictidomys tridecemlineatus	21.76	4.00e-43	167.00
IUUC-Lch-050170	Latimeria chalumnae	21.67	2.00e-48	185.00
IUUC-Lpe-051575	Leersia perrieri	21.05	2.00e-17	83.20
IUUC-Loc-052341	Lepisosteus oculatus	21.80	5.00e-14	71.60
IUUC-Lma-053318	Leptosphaeria maculans	25.24	4.00e-64	238.00
IUUC-Laf-054299	Loxodonta africana	21.50	8.00e-38	150.00
IUUC-Mcc-055438	Macaca mulatta	21.38	8.00e-40	157.00
IUUC-Mor-056928	Magnaporthe oryzae	25.14	7.00e-66	244.00
IUUC-Mpo-057438	Magnaporthe poae	24.42	2.00e-19	89.70
IUUC-Mga-059962	Meleagris gallopavo	21.86	4.00e-22	97.40
IUUC-Mvi-060438	Microbotryum violaceum	28.17	1.00e-20	93.60
IUUC-Mmr-061353	Microcebus murinus	21.80	1.00e-37	150.00
IUUC-Mdo-062061	Monodelphis domestica	27.27	2.00e-23	102.00
IUUC-Mmu-064386	Mus musculus	21.19	2.00e-39	155.00
IUUC-Mac-065653	Musa acuminata	25.72	2.00e-19	89.70
IUUC-Mpu-066420	Mustela putorius furo	21.48	5.00e-36	144.00
IUUC-Mlu-068104	Myotis lucifugus	21.35	2.00e-35	142.00
IUUC-Nfi-068301	Neosartorya fischeri	25.09	6.00e-72	263.00
IUUC-Ncr-068718	Neurospora crassa	24.62	2.00e-62	232.00
IUUC-Nle-069836	Nomascus leucogenys	22.69	2.00e-30	125.00
IUUC-Ont-071605	Oreochromis niloticus	29.53	3.00e-20	92.00
IUUC-Oan-073645	Ornithorhynchus anatinus	25.86	2.00e-28	119.00
IUUC-Ocu-074708	Oryctolagus cuniculus	21.08	2.00e-31	129.00
IUUC-Oba-075290	Oryza barthii	26.38	3.00e-17	82.40
IUUC-Obr-076647	Oryza brachyantha	27.21	3.00e-17	82.40
IUUC-Ogl-077628	Oryza glaberrima	26.90	5.00e-21	95.10
IUUC-Ogu-078209	Oryza glumaepatula	25.42	5.00e-16	78.20
IUUC-Oin-079342	Oryza indica	26.02	2.00e-20	92.80
IUUC-Olo-080623	Oryza longistaminata	25.60	8.00e-18	82.80
IUUC-Ome-081776	Oryza meridionalis	25.97	1.00e-14	73.90
IUUC-Oni-082311	Oryza nivara	26.03	6.00e-20	91.70
IUUC-Opu-083195	Oryza punctata	25.73	1.00e-18	87.00
IUUC-Oru-085006	Oryza rufipogon	26.38	4.00e-17	82.00
IUUC-Osa-085317	Oryza sativa	26.90	8.00e-21	94.40
IUUC-Ola-087145	Oryzias latipes	27.43	4.00e-20	92.00
IUUC-Olu-087785	Ostreococcus lucimarinus	24.58	3.00e-17	82.00
IUUC-Oga-088206	Otolemur garnettii	21.55	1.00e-41	163.00
IUUC-Oar-089802	Ovis aries	22.18	5.00e-37	147.00
IUUC-Ptr-091528	Pan troglodytes	20.94	6.00e-31	127.00
IUUC-Pan-092782	Papio anubis	21.47	2.00e-40	159.00
IUUC-Psi-093102	Pelodiscus sinensis	24.54	2.00e-21	95.50
IUUC-Pno-095063	Phaeosphaeria nodorum	24.31	1.00e-21	97.10
IUUC-Ppa-095436	Physcomitrella patens	27.95	5.00e-24	105.00
IUUC-Pfo-097423	Poecilia formosa	21.54	8.00e-29	120.00
IUUC-Pab-097763	Pongo abelii	21.20	2.00e-38	152.00
IUUC-Pca-100173	Procavia capensis	20.92	6.00e-40	157.00
IUUC-Ppe-101580	Prunus persica	24.86	2.00e-17	83.20
IUUC-Pva-102715	Pteropus vampyrus	21.03	2.00e-36	146.00
IUUC-Pgr-103424	Puccinia graminis	22.70	6.00e-32	130.00
IUUC-Pte-104316	Pyrenophora teres	31.03	2.00e-34	139.00
IUUC-Pyt-104676	Pyrenophora triticirepentis	27.85	3.00e-33	135.00
IUUC-Rno-105122	Rattus norvegicus	21.72	2.00e-41	162.00
IUUC-Sce-106465	Saccharomyces cerevisiae	37.55	0.00e+00	634.00
IUUC-Sha-107208	Sarcophilus harrisii	23.15	2.00e-43	169.00
IUUC-Sja-107771	Schizosaccharomyces japonicus	26.18	2.00e-43	169.00
IUUC-Spo-108272	Schizosaccharomyces pombe	25.79	4.00e-74	271.00
IUUC-Ssl-108576	Sclerotinia sclerotiorum	26.24	1.00e-68	253.00
IUUC-Sit-109932	Setaria italica	22.51	7.00e-21	94.70
IUUC-Sly-111685	Solanum lycopersicum	25.56	2.00e-22	99.40
IUUC-Sar-112998	Sorex araneus	21.95	3.00e-41	161.00
IUUC-Sbi-114074	Sorghum bicolor	26.44	4.00e-20	92.00
IUUC-Ssc-115619	Sus scrofa	25.23	8.00e-18	84.00
IUUC-Tgu-117485	Taeniopygia guttata	22.95	2.00e-20	91.70
IUUC-Tru-118104	Takifugu rubripes	21.52	3.00e-36	145.00
IUUC-Tni-119995	Tetraodon nigroviridis	21.22	4.00e-31	128.00
IUUC-Tre-122080	Trichoderma reesei	25.73	1.00e-64	239.00
IUUC-Tvi-122306	Trichoderma virens	26.22	2.00e-68	251.00
IUUC-Tae-123488	Triticum aestivum	21.96	1.00e-25	110.00
IUUC-Tur-125969	Triticum urartu	21.72	2.00e-20	92.80
IUUC-Tme-126957	Tuber melanosporum	26.98	6.00e-65	240.00
IUUC-Ttr-128387	Tursiops truncatus	23.69	1.00e-18	87.00
IUUC-Vda-129804	Verticillium dahliae	23.46	6.00e-48	184.00
IUUC-Vvi-131701	Vitis vinifera	25.79	1.00e-20	93.60
IUUC-Xtr-132622	Xenopus tropicalis	23.17	1.00e-55	209.00
IUUC-Xma-134014	Xiphophorus maculatus	28.40	2.00e-19	89.40
IUUC-Yli-134589	Yarrowia lipolytica	30.12	3.00e-97	347.00
IUUC-Zma-135732	Zea mays	25.68	2.00e-19	89.40

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence