iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Nle-069020

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

ADFV01061218

Gene Name

TRIM54

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSNLEG00000003234.1	ENSNLET00000004124.1	ENSNLEP00000003930.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.40e-09	37.5	26	82

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkw...........pglknssskefrCPlCr 46
           C+iCle+f++++++lpC+H  +++C + +                ss ++frCP Cr
   Q: 26   CPICLEMFSKPVVILPCQHNLCRKCANDVfqasnplwqsrGSTTVSSGGRFRCPSCR 82
           *************************87777777888899977777899********8 PP

Organism

Nomascus leucogenys

Protein Sequence
(Fasta)

MNFTVGFKPL LGDAHSMDNL EKQLICPICL EMFSKPVVIL PCQHNLCRKC ANDVFQASNP 60
LWQSRGSTTV SSGGRFRCPS CRHEVVLDRH GVYGLQRNLL VENIIDIYKQ ESSRPLHSKA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAACAGTGCT ACCCACAGAG TGAACAAGAG AGAGTTATTT GGGAAACAAA AGGAGAATTT 60
TACAGAGAGA GAGGGATAGC TAAAACTACG TGAGCCTGGC AAGGGTGCAG AGCAGAAAGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR017903--COS_domain
IPR033492--TRIM54
IPR027370--Znf-RING_LisH
IPR000315--Znf_B-box
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS51262--COS
PS50119--ZF_BBOX
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00643--zf-B_box
PF13445--zf-RING_UBOX

SMART

SM00336--BBOX
SM00184--RING

Gene Ontology

GO:0005874--C:microtubule
GO:0008270--F:zinc ion binding
GO:0055001--P:muscle cell development
GO:0070507--P:regulation of microtubule cytoskeleton organization

KEGG

nle:100606136

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002282	Ailuropoda melanoleuca	98.19	1.00e-134	472.00
IUUC-Bgr-012082	Blumeria graminis	34.72	1.00e-08	55.50
IUUC-Bta-013385	Bos taurus	97.60	1.00e-177	615.00
IUUC-Cja-019697	Callithrix jacchus	79.44	1.00e-139	488.00
IUUC-Cfa-020995	Canis familiaris	98.79	4.00e-170	590.00
IUUC-Cpo-021913	Cavia porcellus	97.22	0.00e+00	671.00
IUUC-Csa-023342	Chlorocebus sabaeus	98.89	0.00e+00	652.00
IUUC-Cin-025224	Ciona intestinalis	52.43	2.00e-94	338.00
IUUC-Csv-026374	Ciona savignyi	51.96	7.00e-82	296.00
IUUC-Dre-027562	Danio rerio	68.18	4.00e-145	507.00
IUUC-Dno-029582	Dasypus novemcinctus	98.48	8.00e-172	596.00
IUUC-Dor-031139	Dipodomys ordii	94.71	0.00e+00	641.00
IUUC-Ete-032346	Echinops telfairi	99.51	4.00e-109	387.00
IUUC-Eca-033645	Equus caballus	98.20	4.00e-179	620.00
IUUC-Eeu-035333	Erinaceus europaeus	69.12	2.00e-115	409.00
IUUC-Fca-035865	Felis catus	98.18	0.00e+00	630.00
IUUC-Fal-036978	Ficedula albicollis	81.46	2.00e-166	578.00
IUUC-Ggr-039814	Gaeumannomyces graminis	28.72	1.00e-06	48.90
IUUC-Gga-040452	Gallus gallus	78.41	7.00e-163	566.00
IUUC-Ggo-044467	Gorilla gorilla	89.25	6.00e-177	613.00
IUUC-Hsa-046379	Homo sapiens	99.44	0.00e+00	629.00
IUUC-Itr-047912	Ictidomys tridecemlineatus	95.82	0.00e+00	633.00
IUUC-Lch-050029	Latimeria chalumnae	78.35	4.00e-153	533.00
IUUC-Loc-051801	Lepisosteus oculatus	80.97	5.00e-136	476.00
IUUC-Laf-054215	Loxodonta africana	96.39	0.00e+00	666.00
IUUC-Mcc-055027	Macaca mulatta	88.81	0.00e+00	635.00
IUUC-Meu-056412	Macropus eugenii	93.54	2.00e-166	578.00
IUUC-Mmr-060920	Microcebus murinus	97.50	0.00e+00	658.00
IUUC-Mdo-062832	Monodelphis domestica	96.66	5.00e-165	573.00
IUUC-Mmu-063707	Mus musculus	93.89	2.00e-177	614.00
IUUC-Mlu-067653	Myotis lucifugus	81.85	8.00e-139	486.00
IUUC-Opr-070577	Ochotona princeps	79.51	3.00e-144	504.00
IUUC-Ont-072491	Oreochromis niloticus	62.25	2.00e-120	425.00
IUUC-Oan-073101	Ornithorhynchus anatinus	95.76	6.00e-173	599.00
IUUC-Ocu-074454	Oryctolagus cuniculus	96.67	5.00e-180	623.00
IUUC-Oga-088361	Otolemur garnettii	99.70	3.00e-177	613.00
IUUC-Oar-089950	Ovis aries	81.38	2.00e-140	491.00
IUUC-Ptr-090785	Pan troglodytes	89.00	2.00e-176	611.00
IUUC-Pan-092344	Papio anubis	99.17	0.00e+00	655.00
IUUC-Pab-098322	Pongo abelii	96.65	0.00e+00	630.00
IUUC-Pca-100385	Procavia capensis	76.43	4.00e-121	427.00
IUUC-Rno-105134	Rattus norvegicus	95.00	0.00e+00	672.00
IUUC-Sha-106768	Sarcophilus harrisii	96.35	7.00e-178	615.00
IUUC-Tgu-117494	Taeniopygia guttata	80.12	1.00e-157	548.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence