iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Bta-012550

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

DAAA02047402

Gene Name

STRN4

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSBTAG00000005830.5	ENSBTAT00000007668.5	ENSBTAP00000007668.5

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.60e-27	93.1	550	581
UBD/Beta-Prp	2.70e-47	161.5	596	760

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDl 30
           gH d v++laf +   +l+s+s Dg++++WD+
   Q: 550  GHGDAVWGLAFsPAsQRLASCSADGSVRIWDP 581
           8**********944599**************7 PP

UBD/Beta-Prp

   S: 8    hhksvitcvkf.spdksllatgsrdgtikvwdvttgkllrsl..sgheae...vtavkfspdgkilvtgseDrtikvwdlstgkcvhtl 90
           ++ +  t+v+f s +  ++++++r+g + ++d++ g++l +l   g++ +   +++v  +p++++ +t+++Dr i+  d +tgk vh++
   Q: 596  SDHGTPTSVAFtSTEPAHIVASFRSGDTVLYDLEAGSALLTLdsRGNS-GptqINQVVSHPSQPLTITAHDDRGIRFLDNRTGKLVHSM 683
           44556777999999999*********************9999733444.34779*********************************** PP
   S: 91   kghedsvlslsfspsgdklvsGshdrtirvwdletgqclee...tlsghdgvvncvvvhpdgnllvsGslDrtvrlW 164
            +h d v++l+++p+g +l sGshd  +r+w l++++c++e     ++h++++  v+ hp++ l++s+++D   +++
   Q: 684  VAHLDAVTCLAVDPNGVFLMSGSHDCSLRLWSLDNKTCVQEitaHRKKHEEAIHAVACHPSKALIASAGADALAKVF 760
           *****************************************999999************************988887 PP

Organism

Bos taurus

Protein Sequence
(Fasta)

MMEERAAAAV AAAASSCRPL GSGAGPGPTG AALVSGAARG TPHSVPDQVR FGGGARWTPG 60
GVGGPGPQRF PSLWHSTSEH GTQVGEPEPC RPPPPSVHPQ AQVAFLQGER KGQENLKTDL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGATGGAGG AGCGAGCGGC CGCCGCCGTC GCCGCCGCCG CCTCCTCCTG CCGCCCGCTG 60
GGCTCCGGCG CGGGCCCCGG CCCGACGGGG GCGGCCCTGG TCTCCGTNNN NNNNNNNNNN 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR013258--Striatin_N
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08232--Striatin
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0000159--C:protein phosphatase type 2A complex

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001946	Ailuropoda melanoleuca	78.30	0.00e+00	981.00
IUUC-Aca-004552	Anolis carolinensis	76.25	0.00e+00	947.00
IUUC-Acl-008170	Aspergillus clavatus	26.38	1.00e-24	108.00
IUUC-Ate-010457	Aspergillus terreus	25.66	9.00e-28	119.00
IUUC-Ame-010825	Astyanax mexicanus	51.91	3.00e-162	565.00
IUUC-Cja-018978	Callithrix jacchus	89.88	0.00e+00	902.00
IUUC-Cfa-020268	Canis familiaris	92.83	0.00e+00	1026.00
IUUC-Cpo-022102	Cavia porcellus	91.48	0.00e+00	1048.00
IUUC-Csa-023969	Chlorocebus sabaeus	92.68	0.00e+00	1101.00
IUUC-Dre-027638	Danio rerio	60.53	0.00e+00	751.00
IUUC-Dno-029256	Dasypus novemcinctus	96.19	0.00e+00	660.00
IUUC-Dor-031032	Dipodomys ordii	91.93	0.00e+00	1038.00
IUUC-Ete-033031	Echinops telfairi	77.21	8.00e-157	547.00
IUUC-Eca-033515	Equus caballus	92.23	0.00e+00	1084.00
IUUC-Eeu-035033	Erinaceus europaeus	79.48	2.00e-127	449.00
IUUC-Fca-035749	Felis catus	93.67	0.00e+00	1062.00
IUUC-Gmo-039274	Gadus morhua	60.06	0.00e+00	719.00
IUUC-Gac-042099	Gasterosteus aculeatus	58.00	0.00e+00	721.00
IUUC-Ggo-045406	Gorilla gorilla	92.23	0.00e+00	1048.00
IUUC-Hsa-046341	Homo sapiens	92.23	0.00e+00	1049.00
IUUC-Itr-048200	Ictidomys tridecemlineatus	92.53	0.00e+00	1063.00
IUUC-Lch-049604	Latimeria chalumnae	60.71	0.00e+00	730.00
IUUC-Loc-052671	Lepisosteus oculatus	58.97	0.00e+00	748.00
IUUC-Laf-054531	Loxodonta africana	92.11	0.00e+00	1002.00
IUUC-Mcc-055737	Macaca mulatta	89.07	0.00e+00	1020.00
IUUC-Meu-056845	Macropus eugenii	85.18	0.00e+00	1000.00
IUUC-Mmr-061153	Microcebus murinus	92.97	0.00e+00	1109.00
IUUC-Mdo-062739	Monodelphis domestica	80.81	0.00e+00	956.00
IUUC-Mmu-063564	Mus musculus	92.08	0.00e+00	1056.00
IUUC-Mpu-065794	Mustela putorius furo	93.21	0.00e+00	1015.00
IUUC-Nfi-068560	Neosartorya fischeri	25.42	8.00e-27	115.00
IUUC-Nle-069587	Nomascus leucogenys	82.74	0.00e+00	923.00
IUUC-Opr-071219	Ochotona princeps	72.24	0.00e+00	743.00
IUUC-Ocu-073953	Oryctolagus cuniculus	89.82	0.00e+00	923.00
IUUC-Ola-086888	Oryzias latipes	66.85	4.00e-153	535.00
IUUC-Oga-088280	Otolemur garnettii	92.97	0.00e+00	1109.00
IUUC-Oar-090381	Ovis aries	92.64	0.00e+00	1035.00
IUUC-Ptr-090704	Pan troglodytes	90.33	0.00e+00	1019.00
IUUC-Pan-092058	Papio anubis	92.68	0.00e+00	1100.00
IUUC-Psi-093535	Pelodiscus sinensis	71.73	0.00e+00	667.00
IUUC-Pfo-096556	Poecilia formosa	59.41	0.00e+00	724.00
IUUC-Pab-098573	Pongo abelii	92.22	0.00e+00	1049.00
IUUC-Pca-100746	Procavia capensis	88.02	0.00e+00	955.00
IUUC-Pva-102823	Pteropus vampyrus	92.93	0.00e+00	1079.00
IUUC-Rno-105418	Rattus norvegicus	91.63	0.00e+00	1050.00
IUUC-Sha-106585	Sarcophilus harrisii	90.75	1.00e-141	495.00
IUUC-Ssc-116050	Sus scrofa	94.31	0.00e+00	884.00
IUUC-Tru-117971	Takifugu rubripes	59.62	0.00e+00	733.00
IUUC-Tni-120522	Tetraodon nigroviridis	60.03	0.00e+00	744.00
IUUC-Tbe-128127	Tupaia belangeri	81.34	0.00e+00	726.00
IUUC-Ttr-128911	Tursiops truncatus	87.57	0.00e+00	1011.00
IUUC-Vda-129673	Verticillium dahliae	24.21	6.00e-22	99.80

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence