iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pab-098573

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

ABGA01274383

Gene Name

STRN4

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSPPYG00000010159.1	ENSPPYT00000011804.1	ENSPPYP00000011362.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.40e-28	97.0	455	488
UBD/Beta-Prp	7.00e-49	166.7	501	665

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrt 32
           gH d v++laf ++  +l+s+s Dgt+++WD+++
   Q: 455  GHGDAVWGLAFsPTsQRLASCSADGTVRIWDPSS 488
           8***********7779***************765 PP

UBD/Beta-Prp

   S: 8    hhksvitcvkf.spdksllatgsrdgtikvwdvttgkllrsl.sgheae...vtavkfspdgkilvtgseDrtikvwdlstgkcvhtlk 91
           ++ +v t+v+f s +  ++++++r+g + ++d++ g++l +l s  +++   +++v  +p++++ +t+++Dr i+  d +tgk+vh++ 
   Q: 501  SEHGVPTSVAFtSTEPAHVVASFRSGDTVLYDMEAGSALLTLeSRGSSGptqINQVVSHPNQPLTITAHDDRGIRFLDNRTGKPVHSMV 589
           5678999****999999*********************88885444444566************************************* PP
   S: 92   ghedsvlslsfspsgdklvsGshdrtirvwdletgqclee...tlsghdgvvncvvvhpdgnllvsGslDrtvrlW 164
           +h d v++l+++p+g +l sGshd  +r+w l++++c++e     ++h++++  v+ hp++ l++s+++D   +++
   Q: 590  AHLDAVTCLAVDPNGAFLMSGSHDCSLRLWSLDNKTCVQEitaHRKKHEEAIHAVACHPSKALIASAGADALAKVF 665
           ****************************************999999************************988887 PP

Organism

Pongo abelii

Protein Sequence
(Fasta)

AQVAFLQGER KGQENLKTDL VRRIKMLEYA LKQERAKYHK LKFGTDLNQG EKKADVSEQV 60
SNGPVESVTL ENSPLVWKEG RQLLRQYLEE VGYTDTILDM RSKRVRSLLG RSLELNGAVE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCTCAGGTGG CCTTCCTTCA GGGAGAAAGG AAAGGGCAGG AGAATCTAAA GACGGACCTG 60
GTGCGGCGGA TCAAGATGCT AGAGTATGCG CTGAAGCAGG AAAGGTGAGC CTTCCTCCTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR013258--Striatin_N
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08232--Striatin
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0000159--C:protein phosphatase type 2A complex

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001946	Ailuropoda melanoleuca	80.00	0.00e+00	1001.00
IUUC-Aca-004552	Anolis carolinensis	77.99	0.00e+00	962.00
IUUC-Acl-008170	Aspergillus clavatus	26.51	4.00e-27	117.00
IUUC-Ame-010825	Astyanax mexicanus	53.60	2.00e-169	588.00
IUUC-Bta-012550	Bos taurus	92.22	0.00e+00	1081.00
IUUC-Cja-018978	Callithrix jacchus	96.44	0.00e+00	990.00
IUUC-Cfa-020268	Canis familiaris	95.05	0.00e+00	1059.00
IUUC-Cpo-022102	Cavia porcellus	94.74	0.00e+00	1099.00
IUUC-Csa-023969	Chlorocebus sabaeus	98.80	0.00e+00	1193.00
IUUC-Dre-027638	Danio rerio	60.35	0.00e+00	756.00
IUUC-Dno-029256	Dasypus novemcinctus	97.26	0.00e+00	674.00
IUUC-Dor-031032	Dipodomys ordii	94.74	0.00e+00	1087.00
IUUC-Ete-033031	Echinops telfairi	78.32	3.00e-159	555.00
IUUC-Eca-033515	Equus caballus	94.29	0.00e+00	1112.00
IUUC-Eeu-035033	Erinaceus europaeus	80.00	5.00e-130	457.00
IUUC-Fca-035749	Felis catus	92.80	0.00e+00	1059.00
IUUC-Gmo-039274	Gadus morhua	59.91	0.00e+00	719.00
IUUC-Gac-042099	Gasterosteus aculeatus	59.94	0.00e+00	734.00
IUUC-Ggo-045406	Gorilla gorilla	99.70	0.00e+00	1151.00
IUUC-Hsa-046341	Homo sapiens	99.70	0.00e+00	1151.00
IUUC-Itr-048200	Ictidomys tridecemlineatus	96.10	0.00e+00	1118.00
IUUC-Lch-049604	Latimeria chalumnae	61.49	0.00e+00	752.00
IUUC-Loc-052671	Lepisosteus oculatus	59.80	0.00e+00	759.00
IUUC-Laf-054531	Loxodonta africana	95.89	0.00e+00	1051.00
IUUC-Mcc-055737	Macaca mulatta	95.28	0.00e+00	1112.00
IUUC-Meu-056845	Macropus eugenii	87.24	0.00e+00	1033.00
IUUC-Mmr-061153	Microcebus murinus	96.85	0.00e+00	1171.00
IUUC-Mdo-062739	Monodelphis domestica	82.32	0.00e+00	974.00
IUUC-Mmu-063564	Mus musculus	95.95	0.00e+00	1113.00
IUUC-Mpu-065794	Mustela putorius furo	92.96	0.00e+00	1021.00
IUUC-Nfi-068560	Neosartorya fischeri	26.02	1.00e-26	115.00
IUUC-Nle-069587	Nomascus leucogenys	89.39	0.00e+00	1023.00
IUUC-Opr-071219	Ochotona princeps	75.28	0.00e+00	785.00
IUUC-Ont-071528	Oreochromis niloticus	55.57	0.00e+00	706.00
IUUC-Ocu-073953	Oryctolagus cuniculus	91.93	0.00e+00	965.00
IUUC-Ola-086888	Oryzias latipes	62.38	5.00e-156	545.00
IUUC-Oga-088280	Otolemur garnettii	97.30	0.00e+00	1181.00
IUUC-Oar-090381	Ovis aries	88.48	0.00e+00	990.00
IUUC-Ptr-090704	Pan troglodytes	95.50	0.00e+00	1090.00
IUUC-Pan-092058	Papio anubis	98.65	0.00e+00	1191.00
IUUC-Psi-093535	Pelodiscus sinensis	74.67	0.00e+00	694.00
IUUC-Pfo-096556	Poecilia formosa	59.47	0.00e+00	743.00
IUUC-Pca-100746	Procavia capensis	90.84	0.00e+00	999.00
IUUC-Pva-102823	Pteropus vampyrus	95.07	0.00e+00	1114.00
IUUC-Rno-105418	Rattus norvegicus	95.65	0.00e+00	1108.00
IUUC-Ssc-116050	Sus scrofa	94.18	0.00e+00	894.00
IUUC-Tru-117971	Takifugu rubripes	60.18	0.00e+00	755.00
IUUC-Tni-120522	Tetraodon nigroviridis	61.29	0.00e+00	769.00
IUUC-Tbe-128127	Tupaia belangeri	95.55	0.00e+00	639.00
IUUC-Ttr-128911	Tursiops truncatus	87.99	0.00e+00	1025.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence