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Tag Content
iUUCD ID IUUC-Mtr-058228
Ensembl Protein ID AES80903
UniProt Accession G7L0J5; G7L0J5_MEDTR
Genbank Protein ID AES80903.1
Protein Name U5 small nuclear ribonucleoprotein 40 kDa-like protein
Genbank Nucleotide ID CM001223
Gene Name MTR_7g086360
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
MTR_7g086360 AES80903 AES80903
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 5.00e-41 138.3 96 134
UBD/Beta-Prp 3.40e-59 201.9 51 254
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
    gH++ v +l++ sd t ++s+s D+t+++WD+ tg+++k
   Q: 96 GHKNAVLDLHWtSDgTQIISASPDKTLRLWDTETGKQIK 134
    8***********999********************9876 PP
   


   UBD/Beta-Prp

   S: 48   lsgheaevtavkfspdgkilvtgseDrtikvwdls.tgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhp 147
    l gh+++v+++kf+p+g++ ++gs D+ i +w++ ++k +++lkgh++ vl+l++ +g ++s+s d+t+r+wd+etg+ ++ +h + vn+ +
   Q: 51 LTGHQSAVYTMKFNPTGSVVASGSHDKEIFLWNVHgDCKNFMVLKGHKNAVLDLHWTSDGTQIISASPDKTLRLWDTETGKQIK-KMVEHLSYVNSCCPTR 150
    79********************************9899**********************************************.8889999999999999 PP
   S: 148 dg.nllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsir 247
    g l+vsGs+D+t +lWd+++ ++t+ ++ +++ +sf++ + + +g+ d++vk+wdl++ge+ +tl+gh+d ++s+++sp++ +l++ ++D +
   Q: 151 RGpPLVVSGSDDGTAKLWDMRQRGSIQTFP--DKYQITAVSFSDASDKIYTGGIDNDVKIWDLRKGEVTMTLQGHQDMITSMQLSPDGSYLLTNGMDCKLC 249
    999**************************5..8******************************************************************** PP
   S: 248 iWdlr 252
    iWd+r
   Q: 250 IWDMR 254
    ***98 PP
   

Organism Medicago truncatula
Protein Sequence
(Fasta)
MQGFPGENEH ALSVVGSKPM EWSTVPYNAP RAPGPNGKQR TSSLESPIML LTGHQSAVYT 60
MKFNPTGSVV ASGSHDKEIF LWNVHGDCKN FMVLKGHKNA VLDLHWTSDG TQIISASPDK 120
It may take some time, please wait.

Protein Fasta Sequence



>IUUC-Mtr-058228|E3,WD_repeat;UBD,Beta-Prp|Medicago truncatula
Please wait for a moment...
Nucleotide Sequence
(Fasta)
TACTACCCAT TAAGACGCGG GTCGGGTTTT TATTTAAAAA AAATTCCCAT TTTATTTTTA 60
TTTTTATCAG TACTACCACT ACTGGAGATC GATCGATTGA GGGAGGGAGT TAGGGTTTTG 120
It may take some time, please wait.

Nucleotide Fasta Sequence



>IUUC-Mtr-058228|E3,WD_repeat;UBD,Beta-Prp|Medicago truncatula
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0687--Ribonucleoprotein
KW-0543--Viral nucleoprotein
KW-0946--Virion
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0030529--C:intracellular ribonucleoprotein complex
GO:0019013--C:viral nucleocapsid

KEGG mtr:MTR_7g086360
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000138 Aegilops tauschii 75.00 2.00e-159 554.00
IUUC-Aml-001428 Ailuropoda melanoleuca 60.48 1.00e-109 389.00
IUUC-Atr-003164 Amborella trichopoda 82.62 3.00e-169 586.00
IUUC-Apl-003447 Anas platyrhynchos 60.21 2.00e-106 377.00
IUUC-Aca-004270 Anolis carolinensis 58.44 1.00e-113 401.00
IUUC-Aly-005659 Arabidopsis lyrata 84.06 0.00e+00 629.00
IUUC-Ath-006764 Arabidopsis thaliana 83.19 3.00e-180 623.00
IUUC-Acl-008324 Aspergillus clavatus 48.21 1.00e-89 322.00
IUUC-Afl-008607 Aspergillus flavus 47.65 9.00e-86 309.00
IUUC-Afu-008998 Aspergillus fumigatus 48.53 3.00e-90 324.00
IUUC-Ani-009363 Aspergillus nidulans 46.58 2.00e-89 322.00
IUUC-Ang-009513 Aspergillus niger 45.85 1.00e-80 292.00
IUUC-Aor-010237 Aspergillus oryzae 48.53 2.00e-90 325.00
IUUC-Ate-010374 Aspergillus terreus 44.63 1.00e-77 282.00
IUUC-Ame-010728 Astyanax mexicanus 58.90 3.00e-112 397.00
IUUC-Bgr-012297 Blumeria graminis 42.07 6.00e-63 233.00
IUUC-Bta-012433 Bos taurus 60.46 7.00e-116 409.00
IUUC-Bci-013763 Botrytis cinerea 44.30 5.00e-85 307.00
IUUC-Bdi-014490 Brachypodium distachyon 76.30 1.00e-160 558.00
IUUC-Bol-015154 Brassica oleracea 81.63 1.00e-177 614.00
IUUC-Bra-017008 Brassica rapa 85.41 2.00e-179 620.00
IUUC-Cel-018512 Caenorhabditis elegans 50.81 1.00e-101 362.00
IUUC-Cja-019308 Callithrix jacchus 60.46 9.00e-116 409.00
IUUC-Cfa-020998 Canis familiaris 60.46 1.00e-115 409.00
IUUC-Cpo-021580 Cavia porcellus 60.46 6.00e-116 409.00
IUUC-Cre-022859 Chlamydomonas reinhardtii 55.94 7.00e-115 405.00
IUUC-Csa-023456 Chlorocebus sabaeus 60.46 1.00e-115 409.00
IUUC-Cho-024644 Choloepus hoffmanni 60.19 4.00e-116 410.00
IUUC-Cin-025463 Ciona intestinalis 54.30 2.00e-112 397.00
IUUC-Cgl-026497 Colletotrichum gloeosporioides 44.95 3.00e-86 311.00
IUUC-Cne-026780 Cryptococcus neoformans 38.17 7.00e-61 226.00
IUUC-Dre-027671 Danio rerio 58.58 1.00e-118 418.00
IUUC-Dno-029769 Dasypus novemcinctus 60.19 4.00e-116 410.00
IUUC-Dse-031316 Dothistroma septosporum 40.98 3.00e-78 284.00
IUUC-Dme-031756 Drosophila melanogaster 51.89 3.00e-104 370.00
IUUC-Ete-032753 Echinops telfairi 55.88 2.00e-97 348.00
IUUC-Eca-033979 Equus caballus 60.46 7.00e-116 409.00
IUUC-Eeu-034862 Erinaceus europaeus 64.49 9.00e-51 193.00
IUUC-Fca-036110 Felis catus 57.98 3.00e-91 327.00
IUUC-Fal-037648 Ficedula albicollis 58.59 5.00e-117 413.00
IUUC-Fox-037861 Fusarium oxysporum 42.67 2.00e-82 298.00
IUUC-Fso-038405 Fusarium solani 43.00 3.00e-83 301.00
IUUC-Gmo-039383 Gadus morhua 59.22 9.00e-113 399.00
IUUC-Ggr-040082 Gaeumannomyces graminis 43.65 3.00e-78 284.00
IUUC-Gga-040785 Gallus gallus 59.68 1.00e-114 405.00
IUUC-Gac-041645 Gasterosteus aculeatus 58.58 8.00e-111 392.00
IUUC-Gma-043672 Glycine max 93.62 0.00e+00 690.00
IUUC-Ggo-044800 Gorilla gorilla 54.24 1.00e-92 332.00
IUUC-Hsa-045918 Homo sapiens 60.46 1.00e-115 409.00
IUUC-Hvu-047342 Hordeum vulgare 75.00 3.00e-159 553.00
IUUC-Itr-048047 Ictidomys tridecemlineatus 57.14 2.00e-59 221.00
IUUC-Kpa-049149 Komagataella pastoris 31.39 4.00e-33 134.00
IUUC-Lch-050395 Latimeria chalumnae 57.10 2.00e-121 427.00
IUUC-Lpe-051275 Leersia perrieri 76.68 6.00e-164 569.00
IUUC-Loc-052666 Lepisosteus oculatus 56.01 1.00e-109 389.00
IUUC-Lma-053129 Leptosphaeria maculans 43.57 3.00e-83 301.00
IUUC-Laf-054512 Loxodonta africana 60.46 7.00e-116 409.00
IUUC-Mcc-055819 Macaca mulatta 60.46 1.00e-115 409.00
IUUC-Meu-056350 Macropus eugenii 54.90 5.00e-98 350.00
IUUC-Mor-057063 Magnaporthe oryzae 43.00 7.00e-81 293.00
IUUC-Mpo-057369 Magnaporthe poae 43.65 3.00e-77 281.00
IUUC-Mla-059093 Melampsora laricipopulina 40.00 1.00e-63 235.00
IUUC-Mga-059719 Meleagris gallopavo 57.65 5.00e-118 416.00
IUUC-Mvi-060285 Microbotryum violaceum 36.50 1.00e-54 206.00
IUUC-Mmr-061685 Microcebus murinus 57.19 8.00e-103 365.00
IUUC-Mdo-062121 Monodelphis domestica 60.78 1.00e-115 408.00
IUUC-Mmu-063216 Mus musculus 59.55 1.00e-115 408.00
IUUC-Mac-065463 Musa acuminata 75.00 5.00e-157 546.00
IUUC-Mpu-066390 Mustela putorius furo 60.19 5.00e-116 410.00
IUUC-Mlu-066932 Myotis lucifugus 60.20 8.00e-110 389.00
IUUC-Nfi-068509 Neosartorya fischeri 48.21 5.00e-90 323.00
IUUC-Ncr-068870 Neurospora crassa 45.28 2.00e-85 308.00
IUUC-Nle-069539 Nomascus leucogenys 60.46 2.00e-115 408.00
IUUC-Opr-070555 Ochotona princeps 53.59 1.00e-102 365.00
IUUC-Ont-071490 Oreochromis niloticus 59.67 3.00e-111 394.00
IUUC-Oan-073044 Ornithorhynchus anatinus 54.40 4.00e-95 340.00
IUUC-Ocu-073764 Oryctolagus cuniculus 60.19 3.00e-116 410.00
IUUC-Oba-075704 Oryza barthii 79.14 1.00e-160 558.00
IUUC-Obr-076455 Oryza brachyantha 77.19 6.00e-162 563.00
IUUC-Ogl-077382 Oryza glaberrima 77.19 2.00e-161 560.00
IUUC-Ogu-078739 Oryza glumaepatula 79.14 9.00e-161 558.00
IUUC-Oin-079072 Oryza indica 79.14 9.00e-161 558.00
IUUC-Olo-080809 Oryza longistaminata 79.14 9.00e-161 558.00
IUUC-Ome-081677 Oryza meridionalis 78.83 9.00e-160 555.00
IUUC-Oni-082937 Oryza nivara 79.14 9.00e-161 558.00
IUUC-Opu-083510 Oryza punctata 79.14 9.00e-161 558.00
IUUC-Oru-084360 Oryza rufipogon 77.49 9.00e-162 562.00
IUUC-Osa-085640 Oryza sativa 77.49 5.00e-162 562.00
IUUC-Ola-086504 Oryzias latipes 59.87 1.00e-112 399.00
IUUC-Olu-087869 Ostreococcus lucimarinus 38.82 1.00e-62 232.00
IUUC-Oga-088773 Otolemur garnettii 60.46 7.00e-116 409.00
IUUC-Oar-089677 Ovis aries 59.87 2.00e-114 404.00
IUUC-Ptr-090724 Pan troglodytes 60.27 8.00e-110 389.00
IUUC-Pan-092683 Papio anubis 60.46 1.00e-115 409.00
IUUC-Psi-093415 Pelodiscus sinensis 60.13 4.00e-115 407.00
IUUC-Pma-094562 Petromyzon marinus 59.87 1.00e-118 419.00
IUUC-Pno-095014 Phaeosphaeria nodorum 46.62 3.00e-83 301.00
IUUC-Ppa-095822 Physcomitrella patens 76.67 5.00e-156 543.00
IUUC-Pfo-096579 Poecilia formosa 60.19 7.00e-113 399.00
IUUC-Pab-098313 Pongo abelii 60.46 1.00e-115 409.00
IUUC-Pop-099747 Populus trichocarpa 86.09 0.00e+00 640.00
IUUC-Pca-100871 Procavia capensis 51.97 6.00e-84 303.00
IUUC-Ppe-101389 Prunus persica 86.38 0.00e+00 629.00
IUUC-Pva-102468 Pteropus vampyrus 49.67 8.00e-86 309.00
IUUC-Pgr-103523 Puccinia graminis 37.88 1.00e-69 256.00
IUUC-Ptt-103930 Puccinia triticina 40.44 5.00e-69 253.00
IUUC-Pte-104299 Pyrenophora teres 46.11 8.00e-89 319.00
IUUC-Pyt-104564 Pyrenophora triticirepentis 46.42 2.00e-89 322.00
IUUC-Rno-105796 Rattus norvegicus 59.87 5.00e-115 407.00
IUUC-Sha-107191 Sarcophilus harrisii 60.78 1.00e-115 408.00
IUUC-Sja-107952 Schizosaccharomyces japonicus 38.05 7.00e-63 233.00
IUUC-Spo-108249 Schizosaccharomyces pombe 44.63 3.00e-76 277.00
IUUC-Ssl-108448 Sclerotinia sclerotiorum 43.65 2.00e-84 305.00
IUUC-Sit-110805 Setaria italica 76.30 4.00e-162 563.00
IUUC-Sly-111567 Solanum lycopersicum 85.28 5.00e-171 592.00
IUUC-Stu-112562 Solanum tuberosum 84.66 3.00e-177 613.00
IUUC-Sar-112991 Sorex araneus 61.93 1.00e-82 298.00
IUUC-Sbi-114010 Sorghum bicolor 76.88 1.00e-162 565.00
IUUC-Sre-114947 Sporisorium reilianum 43.48 9.00e-73 266.00
IUUC-Ssc-115371 Sus scrofa 60.46 7.00e-116 409.00
IUUC-Tgu-117429 Taeniopygia guttata 59.48 1.00e-114 405.00
IUUC-Tru-118081 Takifugu rubripes 59.87 7.00e-113 399.00
IUUC-Tsy-119101 Tarsius syrichta 52.29 2.00e-93 335.00
IUUC-Tni-120532 Tetraodon nigroviridis 59.22 4.00e-112 397.00
IUUC-Tca-121373 Theobroma cacao 88.99 0.00e+00 645.00
IUUC-Tre-122050 Trichoderma reesei 45.93 6.00e-85 306.00
IUUC-Tvi-122394 Trichoderma virens 44.30 7.00e-81 293.00
IUUC-Tae-124661 Triticum aestivum 74.50 2.00e-157 547.00
IUUC-Tme-126998 Tuber melanosporum 49.68 6.00e-89 320.00
IUUC-Tbe-128032 Tupaia belangeri 60.46 1.00e-115 409.00
IUUC-Ttr-129102 Tursiops truncatus 51.31 6.00e-91 327.00
IUUC-Uma-129363 Ustilago maydis 44.41 2.00e-75 275.00
IUUC-Vda-129891 Verticillium dahliae 45.60 3.00e-84 304.00
IUUC-Vpa-130827 Vicugna pacos 60.46 1.00e-115 409.00
IUUC-Vvi-131202 Vitis vinifera 89.31 0.00e+00 650.00
IUUC-Xtr-132769 Xenopus tropicalis 56.77 6.00e-106 376.00
IUUC-Xma-133147 Xiphophorus maculatus 59.87 2.00e-112 397.00
IUUC-Zma-135294 Zea mays 78.83 2.00e-161 561.00
Created Date 25-Jun-2017

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