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Basic Information Integrated Annotations
Tag Content
iUUCD ID IUUC-Rno-104951
Ensembl Protein ID ENSRNOP00000065064.2
UniProt Accession M0R6L2; M0R6L2_RAT
Genbank Protein ID EDL78952.1
Protein Name RCG59107, isoform CRA_a; WD repeat domain 17
Genbank Nucleotide ID AABR07025540
Gene Name Wdr17; LOC364653; rCG_59107
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSRNOG00000048847.2 ENSRNOT00000074885.2 ENSRNOP00000065064.2
ENSRNOG00000048847.2 ENSRNOT00000081994.1 ENSRNOP00000069861.1
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
DNA & RNA Element
RAID2
Post-translational Modifications (PTMs)
dbPAF
Protein Expression/Proteomics
GPMDB
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 2.50e-51 169.7 590 629
UBD/Beta-Prp 9.00e-65 219.2 496 665
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD
   S: 1    gHtdsvtclaf.sd..tllvsGsdDgtikvWDlrtgvllk 37
           gHt++v++l + ++   ll+sGs+D tikvWD+r gv+l 
   Q: 590  GHTAPVRGLMWnTEipYLLISGSWDYTIKVWDTRGGVCLD 629
           8**********85573668******************986 PP
   

   UBD/Beta-Prp
   S: 43   kllrslsgheaevtavkfspdgk.ilvtgseDrtikvw..dlstgkcvhtlkghedsvlslsfsp.sgdklvsGshdrtirvwdletgq 127
           kll++ ++h a+v  +++s++ k +++tg eD++++v+    s+++++ +++gh+++v  +++sp    +l sGs+d  +r+wd  ++ 
   Q: 496  KLLHK-YKHPAAVFGCDWSQNNKdMIATGCEDKHVRVFyvASSSNQPLKVFSGHTARVFHVKWSPlREGVLCSGSDDGSVRIWDYTQDA 583
           55444.789999*9***9988777**************888889*********************666********************* PP
   S: 128  cleetlsghdgvvncvvvhpdg.nllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsng.kelvsgsldgtvklwdl 209
           c++ +l+gh++ v+++ ++ +   ll+sGs D t+++Wd + g +l+t    h  +vy l+ ++++ + ++s+s+d+tv+lw+l
   Q: 584  CIS-ILNGHTAPVRGLMWNTEIpYLLISGSWDYTIKVWDTRGGVCLDTVYD-HGADVYGLTCHPSRpFTMASCSRDSTVRLWSL 665
           **9.******************9**************************87.*********99999899*************97 PP
   
Organism Rattus norvegicus
Protein Sequence
(Fasta)
MAWMTYVSHW FEQDDWYEGL QRATMSQVRQ VGLLAAGCQP WNKDVCAANG DRFAYCATLA 60
IYIYQLDHRY NEFRLHAIMA EHKKTITAIS WCPHNPDLFA SGSTDNLVII WNVAEQNVIA 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Rno-104951|E3,WD_repeat;UBD,Beta-Prp|Rattus norvegicus
Please wait for a moment...
Nucleotide Sequence
(Fasta)
ATGGCTTGGA TGACTTACGT TTCCCATTGG TTTGAGCAGG ATGACTGGTA TGAAGGACTA 60
CAAAGAGTAA GATGTTTTTA TATTGCAATT ATAATTTTCT GACAGGTTTG CTCTATTTAC 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Rno-104951|E3,WD_repeat;UBD,Beta-Prp|Rattus norvegicus
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat
Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR011047--Quinoprotein_ADH-like_supfam
IPR011990--TPR-like_helical_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
Pfam

PF00400--WD40
PRINTS

PR00320--GPROTEINBRPT
SMART

SM00320--WD40
Gene Ontology

GO:0005737--C:cytoplasm
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Aml-001190 Ailuropoda melanoleuca 86.15 0.00e+00 2359.00
IUUC-Apl-003326 Anas platyrhynchos 80.53 0.00e+00 2182.00
IUUC-Aca-004349 Anolis carolinensis 80.79 0.00e+00 2179.00
IUUC-Ame-011366 Astyanax mexicanus 57.45 0.00e+00 1394.00
IUUC-Bta-013275 Bos taurus 86.30 0.00e+00 2354.00
IUUC-Cja-018970 Callithrix jacchus 84.95 0.00e+00 2362.00
IUUC-Cfa-021237 Canis familiaris 85.28 0.00e+00 2383.00
IUUC-Cpo-021342 Cavia porcellus 83.78 0.00e+00 1610.00
IUUC-Cre-022569 Chlamydomonas reinhardtii 29.45 2.00e-86 314.00
IUUC-Csa-023687 Chlorocebus sabaeus 86.38 0.00e+00 2392.00
IUUC-Cho-024772 Choloepus hoffmanni 77.80 0.00e+00 785.00
IUUC-Csv-026021 Ciona savignyi 40.55 0.00e+00 1014.00
IUUC-Dre-028031 Danio rerio 76.33 0.00e+00 2076.00
IUUC-Dno-029369 Dasypus novemcinctus 82.79 0.00e+00 2188.00
IUUC-Dor-030645 Dipodomys ordii 83.51 0.00e+00 2306.00
IUUC-Ete-032530 Echinops telfairi 79.82 0.00e+00 2197.00
IUUC-Eca-034405 Equus caballus 86.30 0.00e+00 2355.00
IUUC-Eeu-035006 Erinaceus europaeus 78.61 0.00e+00 998.00
IUUC-Fca-035965 Felis catus 86.08 0.00e+00 2354.00
IUUC-Fal-037136 Ficedula albicollis 78.93 0.00e+00 2154.00
IUUC-Gmo-039293 Gadus morhua 71.17 0.00e+00 1845.00
IUUC-Gga-040931 Gallus gallus 78.40 0.00e+00 2148.00
IUUC-Gac-042493 Gasterosteus aculeatus 70.86 0.00e+00 1910.00
IUUC-Ggo-045540 Gorilla gorilla 86.24 0.00e+00 2345.00
IUUC-Hsa-046708 Homo sapiens 86.01 0.00e+00 2393.00
IUUC-Lch-050135 Latimeria chalumnae 77.84 0.00e+00 1621.00
IUUC-Loc-051730 Lepisosteus oculatus 79.09 0.00e+00 2156.00
IUUC-Laf-053743 Loxodonta africana 86.07 0.00e+00 2340.00
IUUC-Mcc-055590 Macaca mulatta 86.45 0.00e+00 2394.00
IUUC-Meu-056328 Macropus eugenii 63.09 0.00e+00 1550.00
IUUC-Mga-059877 Meleagris gallopavo 76.88 0.00e+00 2087.00
IUUC-Mmr-060756 Microcebus murinus 87.75 0.00e+00 2434.00
IUUC-Mdo-062749 Monodelphis domestica 80.70 0.00e+00 2224.00
IUUC-Mmu-063668 Mus musculus 92.89 0.00e+00 2560.00
IUUC-Mpu-066856 Mustela putorius furo 85.84 0.00e+00 2367.00
IUUC-Mlu-067186 Myotis lucifugus 82.02 0.00e+00 2244.00
IUUC-Nle-070018 Nomascus leucogenys 85.50 0.00e+00 2345.00
IUUC-Ont-071482 Oreochromis niloticus 67.41 0.00e+00 1775.00
IUUC-Oan-073065 Ornithorhynchus anatinus 79.82 0.00e+00 1709.00
IUUC-Ocu-073786 Oryctolagus cuniculus 85.91 0.00e+00 2336.00
IUUC-Oga-088545 Otolemur garnettii 80.90 0.00e+00 2239.00
IUUC-Oar-090205 Ovis aries 84.47 0.00e+00 2365.00
IUUC-Ptr-091092 Pan troglodytes 85.78 0.00e+00 2387.00
IUUC-Pan-092430 Papio anubis 86.45 0.00e+00 2392.00
IUUC-Psi-093774 Pelodiscus sinensis 81.28 0.00e+00 2202.00
IUUC-Pfo-097414 Poecilia formosa 70.67 0.00e+00 1860.00
IUUC-Pab-097853 Pongo abelii 86.01 0.00e+00 2391.00
IUUC-Pca-100440 Procavia capensis 68.45 0.00e+00 980.00
IUUC-Pva-102838 Pteropus vampyrus 84.11 0.00e+00 2330.00
IUUC-Sha-107508 Sarcophilus harrisii 79.49 0.00e+00 2187.00
IUUC-Sar-113549 Sorex araneus 81.62 0.00e+00 1499.00
IUUC-Ssc-115753 Sus scrofa 86.47 0.00e+00 1865.00
IUUC-Tgu-117315 Taeniopygia guttata 79.40 0.00e+00 2145.00
IUUC-Tru-118153 Takifugu rubripes 71.42 0.00e+00 1900.00
IUUC-Tsy-119384 Tarsius syrichta 79.70 0.00e+00 2198.00
IUUC-Tni-120820 Tetraodon nigroviridis 68.52 1.00e-89 322.00
IUUC-Tbe-127579 Tupaia belangeri 76.24 0.00e+00 1024.00
IUUC-Ttr-128488 Tursiops truncatus 79.50 0.00e+00 2187.00
IUUC-Vpa-130274 Vicugna pacos 78.95 0.00e+00 991.00
IUUC-Xtr-132199 Xenopus tropicalis 80.46 0.00e+00 2204.00
Created Date 25-Jun-2017

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