iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mtr-058451

Ensembl Protein ID

KEH32170

UniProt Accession

A0A072V213; A0A072V213_MEDTR

Genbank Protein ID

KEH32170.1

Protein Name

Transducin/WD-like repeat-protein

Genbank Nucleotide ID

CM001220

Gene Name

MTR_4g116900

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MTR_4g116900	KEH32170	KEH32170

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	6.10e-16	59.3	293	327

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sdtll.vsGsdDgtikvWDlrtg 33
           H+++++ ++f  ++t++ +++s Dgt   WDlr+ 
   Q: 293  HESRINTIDFspQTTHIvATSSSDGTACTWDLRSI 327
           9**********633565388************986 PP

Organism

Medicago truncatula

Protein Sequence
(Fasta)

MAPQKLTEYE RKRLENIRRN NEMMAALKVH TKATELSILP KAVTKSYSVK SEKKPKTETP 60
IVIRRSLRTR GIPPDSKGSD SSTLTRNSPQ KINDFVQNLG PIPMKDAYKG DDDSDRSFIE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATTCGGAAAA CCCAAATCCC TAATTTCCTC TTTTTTCTTC TCTTCTCTTC TCTTTAATGG 60
CGCCTCAGAA ACTCACTGAG TACGAACGCA AACGACTCGA AAACATTCGC CGCAACAATG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR033052--Cmr1/WDR76
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

SMART

SM00320--WD40

Gene Ontology

GO:0006974--P:cellular response to DNA damage stimulus

KEGG

mtr:MTR_4g116900

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001182	Aegilops tauschii	33.96	7.00e-71	260.00
IUUC-Atr-002605	Amborella trichopoda	42.16	2.00e-75	275.00
IUUC-Apl-003441	Anas platyrhynchos	28.54	1.00e-36	147.00
IUUC-Aca-004241	Anolis carolinensis	29.65	6.00e-41	160.00
IUUC-Aly-005444	Arabidopsis lyrata	45.38	2.00e-120	425.00
IUUC-Ath-007550	Arabidopsis thaliana	45.89	5.00e-120	424.00
IUUC-Ago-007715	Ashbya gossypii	24.49	1.00e-25	110.00
IUUC-Acl-008370	Aspergillus clavatus	24.39	2.00e-29	123.00
IUUC-Afl-008586	Aspergillus flavus	24.63	1.00e-27	117.00
IUUC-Afu-008907	Aspergillus fumigatus	24.02	5.00e-28	118.00
IUUC-Ani-009415	Aspergillus nidulans	24.25	5.00e-26	111.00
IUUC-Ang-009597	Aspergillus niger	22.98	8.00e-10	58.20
IUUC-Aor-010197	Aspergillus oryzae	24.45	3.00e-27	115.00
IUUC-Ate-010280	Aspergillus terreus	26.42	2.00e-26	112.00
IUUC-Bgr-012236	Blumeria graminis	26.34	1.00e-30	127.00
IUUC-Bta-013059	Bos taurus	26.11	2.00e-33	137.00
IUUC-Bci-013796	Botrytis cinerea	25.56	3.00e-28	119.00
IUUC-Bdi-015040	Brachypodium distachyon	46.20	6.00e-73	267.00
IUUC-Bol-016546	Brassica oleracea	45.51	1.00e-121	429.00
IUUC-Bra-018032	Brassica rapa	55.18	1.00e-108	386.00
IUUC-Cja-019043	Callithrix jacchus	25.74	2.00e-29	123.00
IUUC-Cfa-021103	Canis familiaris	26.21	4.00e-30	125.00
IUUC-Cpo-021508	Cavia porcellus	27.43	5.00e-31	129.00
IUUC-Cre-022967	Chlamydomonas reinhardtii	29.00	7.00e-18	85.10
IUUC-Csa-023555	Chlorocebus sabaeus	25.05	2.00e-31	129.00
IUUC-Cin-025651	Ciona intestinalis	24.25	3.00e-28	119.00
IUUC-Cgl-026604	Colletotrichum gloeosporioides	29.49	8.00e-32	130.00
IUUC-Cme-027238	Cyanidioschyzon merolae	23.30	1.00e-13	70.50
IUUC-Dre-027441	Danio rerio	28.99	3.00e-37	149.00
IUUC-Dno-029575	Dasypus novemcinctus	25.53	3.00e-33	135.00
IUUC-Dor-030554	Dipodomys ordii	24.31	4.00e-26	112.00
IUUC-Dse-031299	Dothistroma septosporum	26.42	6.00e-30	124.00
IUUC-Eca-034027	Equus caballus	26.42	1.00e-21	97.40
IUUC-Fca-035892	Felis catus	26.37	3.00e-29	122.00
IUUC-Fal-036986	Ficedula albicollis	27.64	3.00e-32	132.00
IUUC-Fox-037750	Fusarium oxysporum	26.24	1.00e-31	130.00
IUUC-Fso-038198	Fusarium solani	29.47	3.00e-28	119.00
IUUC-Gga-040479	Gallus gallus	25.24	2.00e-20	93.20
IUUC-Gac-042043	Gasterosteus aculeatus	23.96	2.00e-23	102.00
IUUC-Gma-043913	Glycine max	70.04	0.00e+00	679.00
IUUC-Ggo-045290	Gorilla gorilla	25.95	5.00e-34	138.00
IUUC-Hsa-047021	Homo sapiens	25.74	2.00e-33	136.00
IUUC-Hvu-047193	Hordeum vulgare	47.26	2.00e-79	288.00
IUUC-Itr-047914	Ictidomys tridecemlineatus	25.94	6.00e-29	121.00
IUUC-Kpa-049275	Komagataella pastoris	26.07	4.00e-26	112.00
IUUC-Lch-049718	Latimeria chalumnae	26.37	4.00e-42	165.00
IUUC-Lpe-051708	Leersia perrieri	45.73	4.00e-75	274.00
IUUC-Loc-052565	Lepisosteus oculatus	25.96	1.00e-34	140.00
IUUC-Lma-053276	Leptosphaeria maculans	27.56	7.00e-32	132.00
IUUC-Laf-053970	Loxodonta africana	25.99	4.00e-35	142.00
IUUC-Mcc-054740	Macaca mulatta	25.79	5.00e-31	128.00
IUUC-Meu-056546	Macropus eugenii	25.70	2.00e-14	73.90
IUUC-Mla-059117	Melampsora laricipopulina	23.45	4.00e-30	125.00
IUUC-Mga-059328	Meleagris gallopavo	25.59	2.00e-25	109.00
IUUC-Mvi-060555	Microbotryum violaceum	23.75	5.00e-16	78.60
IUUC-Mmr-061520	Microcebus murinus	27.04	3.00e-35	142.00
IUUC-Mdo-062812	Monodelphis domestica	25.62	1.00e-33	137.00
IUUC-Mmu-064011	Mus musculus	25.63	1.00e-23	104.00
IUUC-Mpu-066486	Mustela putorius furo	25.42	7.00e-28	118.00
IUUC-Mlu-067721	Myotis lucifugus	26.67	3.00e-22	99.40
IUUC-Nfi-068314	Neosartorya fischeri	23.64	4.00e-26	112.00
IUUC-Ncr-068896	Neurospora crassa	25.61	1.00e-30	127.00
IUUC-Nle-069369	Nomascus leucogenys	26.37	1.00e-34	140.00
IUUC-Opr-070975	Ochotona princeps	25.85	4.00e-31	129.00
IUUC-Ont-072528	Oreochromis niloticus	25.26	9.00e-27	114.00
IUUC-Oan-072955	Ornithorhynchus anatinus	24.47	3.00e-29	122.00
IUUC-Ocu-074561	Oryctolagus cuniculus	27.63	1.00e-30	127.00
IUUC-Oba-074982	Oryza barthii	46.15	2.00e-79	289.00
IUUC-Obr-076551	Oryza brachyantha	48.77	2.00e-66	244.00
IUUC-Ogl-077685	Oryza glaberrima	46.58	2.00e-83	302.00
IUUC-Ogu-078331	Oryza glumaepatula	46.58	1.00e-83	302.00
IUUC-Oin-079507	Oryza indica	46.86	2.00e-82	298.00
IUUC-Olo-080604	Oryza longistaminata	44.93	1.00e-73	269.00
IUUC-Ome-081816	Oryza meridionalis	44.68	2.00e-79	288.00
IUUC-Oni-082051	Oryza nivara	46.89	6.00e-85	307.00
IUUC-Opu-083372	Oryza punctata	44.95	5.00e-81	294.00
IUUC-Oru-084578	Oryza rufipogon	46.58	1.00e-83	302.00
IUUC-Osa-086177	Oryza sativa	46.58	1.00e-83	302.00
IUUC-Ola-087208	Oryzias latipes	27.04	2.00e-25	109.00
IUUC-Olu-087680	Ostreococcus lucimarinus	26.92	5.00e-39	154.00
IUUC-Oga-088104	Otolemur garnettii	26.47	1.00e-32	134.00
IUUC-Oar-090157	Ovis aries	25.32	1.00e-31	130.00
IUUC-Ptr-091615	Pan troglodytes	25.79	4.00e-34	139.00
IUUC-Pan-092212	Papio anubis	25.79	5.00e-31	128.00
IUUC-Psi-092950	Pelodiscus sinensis	27.50	4.00e-39	155.00
IUUC-Pma-094625	Petromyzon marinus	31.63	1.00e-10	60.10
IUUC-Pno-094824	Phaeosphaeria nodorum	27.19	1.00e-35	143.00
IUUC-Pfo-096922	Poecilia formosa	26.18	4.00e-34	139.00
IUUC-Pab-097591	Pongo abelii	25.95	3.00e-33	135.00
IUUC-Pop-099337	Populus trichocarpa	56.23	1.00e-159	555.00
IUUC-Pca-101025	Procavia capensis	22.77	3.00e-26	112.00
IUUC-Ppe-101256	Prunus persica	54.06	2.00e-148	518.00
IUUC-Pva-102453	Pteropus vampyrus	25.46	3.00e-24	106.00
IUUC-Pgr-103436	Puccinia graminis	24.83	2.00e-19	90.10
IUUC-Ptt-103899	Puccinia triticina	27.00	2.00e-24	106.00
IUUC-Pte-104258	Pyrenophora teres	26.67	4.00e-33	135.00
IUUC-Pyt-104625	Pyrenophora triticirepentis	27.27	7.00e-31	127.00
IUUC-Rno-104843	Rattus norvegicus	26.87	5.00e-28	118.00
IUUC-Sce-106189	Saccharomyces cerevisiae	24.48	3.00e-25	109.00
IUUC-Sha-106672	Sarcophilus harrisii	26.42	3.00e-35	142.00
IUUC-Smo-109660	Selaginella moellendorffii	38.12	4.00e-66	244.00
IUUC-Sit-109704	Setaria italica	44.92	6.00e-79	287.00
IUUC-Sly-111853	Solanum lycopersicum	53.70	2.00e-136	478.00
IUUC-Stu-112482	Solanum tuberosum	51.90	1.00e-134	472.00
IUUC-Sbi-114517	Sorghum bicolor	40.00	1.00e-77	283.00
IUUC-Sre-114960	Sporisorium reilianum	20.62	7.00e-11	62.00
IUUC-Ssc-115568	Sus scrofa	26.26	1.00e-31	130.00
IUUC-Tgu-117276	Taeniopygia guttata	26.06	5.00e-31	128.00
IUUC-Tni-120358	Tetraodon nigroviridis	25.46	3.00e-28	119.00
IUUC-Tca-121273	Theobroma cacao	51.40	1.00e-149	522.00
IUUC-Tre-121932	Trichoderma reesei	30.41	4.00e-32	132.00
IUUC-Tvi-122567	Trichoderma virens	26.77	3.00e-32	132.00
IUUC-Tae-125792	Triticum aestivum	46.34	5.00e-80	290.00
IUUC-Tur-125970	Triticum urartu	37.57	2.00e-52	198.00
IUUC-Tme-126958	Tuber melanosporum	29.70	3.00e-21	95.50
IUUC-Tbe-127425	Tupaia belangeri	25.23	2.00e-26	113.00
IUUC-Ttr-129123	Tursiops truncatus	25.54	1.00e-24	107.00
IUUC-Uma-129495	Ustilago maydis	21.15	3.00e-09	56.20
IUUC-Vda-129981	Verticillium dahliae	27.41	1.00e-35	144.00
IUUC-Vpa-130437	Vicugna pacos	25.93	1.00e-24	107.00
IUUC-Vvi-131430	Vitis vinifera	51.37	1.00e-121	429.00
IUUC-Xtr-132670	Xenopus tropicalis	28.39	2.00e-45	176.00
IUUC-Xma-133375	Xiphophorus maculatus	26.46	3.00e-29	122.00
IUUC-Yli-134341	Yarrowia lipolytica	22.51	2.00e-22	100.00
IUUC-Zma-135413	Zea mays	39.04	6.00e-88	317.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence