iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114059

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000763

Gene Name

SORBI_004G239500

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb04g028130	Sb04g028130.1	Sb04g028130.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	4.30e-07	31.2	182	224

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf...kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C+iCl+d+   ++  + lp C H+fh+ C+ kw         + +CP+Cr
   Q: 182  CPICLQDIvagET-ARRLPnCSHTFHQPCVDKW------LVDHGSCPVCR 224
           ********88644.667778*************......9*********8 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MEVAEAPAPA PDEDALDERG VALHLPRLLA GVVSGALTGL FALAGALTGA VTGAVAGRAS 60
DSGGVLRGAG LGAVAGAVLS IEVLEASRAY WCSDRLGSHG ASSMADFIEQ LLRARFVQEQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAGGTCG CCGAGGCGCC CGCGCCCGCG CCCGACGAGG ACGCGCTGGA CGAACGCGGC 60
GTCGCGCTGC ACCTCCCGAG GCTGCTCGCC GGCGTCGTCT CCGGCGCCCT CACTGGCCTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

sbi:SORBI_04g028130

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000628	Aegilops tauschii	74.78	5.00e-66	242.00
IUUC-Aly-006321	Arabidopsis lyrata	56.65	1.00e-44	174.00
IUUC-Ath-007375	Arabidopsis thaliana	57.64	9.00e-46	175.00
IUUC-Bdi-014634	Brachypodium distachyon	68.28	6.00e-68	249.00
IUUC-Cre-022984	Chlamydomonas reinhardtii	34.68	1.00e-15	78.60
IUUC-Csa-023998	Chlorocebus sabaeus	43.42	1.00e-13	71.20
IUUC-Ete-032338	Echinops telfairi	43.42	5.00e-14	71.60
IUUC-Eca-034421	Equus caballus	43.42	3.00e-14	71.60
IUUC-Gma-043588	Glycine max	53.64	1.00e-44	171.00
IUUC-Lpe-051393	Leersia perrieri	82.38	2.00e-79	286.00
IUUC-Mcc-055292	Macaca mulatta	43.42	1.00e-13	70.90
IUUC-Mtr-058669	Medicago truncatula	54.71	1.00e-43	168.00
IUUC-Mmu-063776	Mus musculus	43.42	5.00e-14	72.00
IUUC-Obr-076442	Oryza brachyantha	84.14	2.00e-80	292.00
IUUC-Ogl-077830	Oryza glaberrima	85.90	4.00e-83	299.00
IUUC-Ogu-078610	Oryza glumaepatula	85.97	2.00e-80	291.00
IUUC-Oin-079594	Oryza indica	85.90	4.00e-83	299.00
IUUC-Oni-082244	Oryza nivara	85.97	2.00e-80	291.00
IUUC-Opu-083541	Oryza punctata	64.00	4.00e-54	203.00
IUUC-Oru-085125	Oryza rufipogon	85.97	2.00e-80	291.00
IUUC-Osa-086024	Oryza sativa	85.90	4.00e-83	299.00
IUUC-Pan-092534	Papio anubis	43.42	1.00e-13	70.90
IUUC-Rno-105580	Rattus norvegicus	43.42	4.00e-14	71.60
IUUC-Smo-109575	Selaginella moellendorffii	58.54	2.00e-47	181.00
IUUC-Sit-109877	Setaria italica	91.19	3.00e-80	290.00
IUUC-Tca-121623	Theobroma cacao	61.08	6.00e-47	179.00
IUUC-Tae-123993	Triticum aestivum	76.52	3.00e-66	243.00
IUUC-Tur-126124	Triticum urartu	76.09	9.00e-66	242.00
IUUC-Ttr-128694	Tursiops truncatus	43.42	5.00e-14	72.00
IUUC-Vvi-131189	Vitis vinifera	63.24	3.00e-52	197.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence