iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Oga-088152

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AAQR03094191

Gene Name

WDR53

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSOGAG00000011240.2	ENSOGAT00000011243.2	ENSOGAP00000010064.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.70e-26	91.1	239	277

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           gHt +v+ ++f ++  ll+sG++Dg+i++WD++t v+ k
   Q: 239  GHTLGVSQVCFlPEsYLLLSGGNDGKIMLWDVSTEVKKK 277
           8999********88899***************9998876 PP

Organism

Otolemur garnettii

Protein Sequence
(Fasta)

MAAKWTGGHS SPILCLNASK EGLVASGAEG GGLVAWGEDG TPLGHMQFQG ADDVTSVLFS 60
PSCPTKLYAS HGETISILDV RSLKGILDYF HVNEEEINCL SLNETENLLA SADDSGAIKI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CAGAGTCTTC TGGGCCATTA TGGCAGCCAA GTGGACTGGC GGACATTCTT CTCCTATTCT 60
CTGCCTGAAT GCAAGTAAAG AAGGACTAGT GGCTTCTGGA GCAGAGGGTG GCGGTCTCGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR024977--Apc4_WD40_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12894--ANAPC4_WD40
PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000124	Aegilops tauschii	28.22	3.00e-14	72.80
IUUC-Aml-001203	Ailuropoda melanoleuca	89.08	0.00e+00	627.00
IUUC-Atr-002680	Amborella trichopoda	26.05	1.00e-22	100.00
IUUC-Apl-003656	Anas platyrhynchos	58.15	5.00e-106	377.00
IUUC-Aca-004987	Anolis carolinensis	64.61	1.00e-128	452.00
IUUC-Aly-006254	Arabidopsis lyrata	32.13	1.00e-28	120.00
IUUC-Ath-006632	Arabidopsis thaliana	29.93	7.00e-27	114.00
IUUC-Ame-011032	Astyanax mexicanus	46.49	1.00e-93	336.00
IUUC-Bta-012588	Bos taurus	82.30	6.00e-163	566.00
IUUC-Bdi-014532	Brachypodium distachyon	27.15	7.00e-26	111.00
IUUC-Bol-015542	Brassica oleracea	28.99	2.00e-20	94.40
IUUC-Bra-017046	Brassica rapa	31.35	1.00e-27	118.00
IUUC-Cja-019365	Callithrix jacchus	90.76	0.00e+00	666.00
IUUC-Cfa-021090	Canis familiaris	89.64	0.00e+00	636.00
IUUC-Cpo-021517	Cavia porcellus	81.84	3.00e-176	610.00
IUUC-Csa-023041	Chlorocebus sabaeus	89.92	0.00e+00	638.00
IUUC-Cho-024801	Choloepus hoffmanni	88.20	0.00e+00	654.00
IUUC-Dre-028437	Danio rerio	46.93	2.00e-87	316.00
IUUC-Dno-029267	Dasypus novemcinctus	89.04	0.00e+00	659.00
IUUC-Ete-032726	Echinops telfairi	73.39	6.00e-149	520.00
IUUC-Eca-033621	Equus caballus	90.42	1.00e-176	612.00
IUUC-Eeu-034461	Erinaceus europaeus	77.87	1.00e-161	561.00
IUUC-Fca-036410	Felis catus	88.45	1.00e-177	615.00
IUUC-Fal-036676	Ficedula albicollis	65.17	5.00e-129	453.00
IUUC-Gmo-039597	Gadus morhua	34.93	9.00e-17	80.90
IUUC-Gga-040760	Gallus gallus	63.64	1.00e-70	258.00
IUUC-Gac-041905	Gasterosteus aculeatus	49.05	3.00e-90	325.00
IUUC-Gma-043066	Glycine max	30.43	4.00e-17	82.40
IUUC-Ggo-044881	Gorilla gorilla	89.64	0.00e+00	635.00
IUUC-Hsa-046836	Homo sapiens	89.36	0.00e+00	631.00
IUUC-Hvu-047651	Hordeum vulgare	25.52	6.00e-24	104.00
IUUC-Itr-048206	Ictidomys tridecemlineatus	92.16	0.00e+00	639.00
IUUC-Lch-050406	Latimeria chalumnae	54.99	8.00e-94	337.00
IUUC-Loc-052878	Lepisosteus oculatus	53.76	4.00e-101	361.00
IUUC-Laf-053547	Loxodonta africana	87.39	0.00e+00	630.00
IUUC-Mcc-054646	Macaca mulatta	89.36	0.00e+00	634.00
IUUC-Meu-056381	Macropus eugenii	76.75	1.00e-161	561.00
IUUC-Mtr-058656	Medicago truncatula	27.25	1.00e-18	87.80
IUUC-Mmr-061601	Microcebus murinus	92.18	0.00e+00	683.00
IUUC-Mdo-062305	Monodelphis domestica	76.19	1.00e-161	562.00
IUUC-Mmu-063213	Mus musculus	83.75	2.00e-167	581.00
IUUC-Mac-064940	Musa acuminata	24.69	1.00e-28	120.00
IUUC-Mpu-066629	Mustela putorius furo	88.20	0.00e+00	634.00
IUUC-Nle-069860	Nomascus leucogenys	89.36	0.00e+00	631.00
IUUC-Opr-071180	Ochotona princeps	84.23	7.00e-152	529.00
IUUC-Ont-071912	Oreochromis niloticus	46.89	6.00e-98	350.00
IUUC-Ocu-074874	Oryctolagus cuniculus	89.08	0.00e+00	657.00
IUUC-Oba-075815	Oryza barthii	27.36	7.00e-14	71.20
IUUC-Obr-076835	Oryza brachyantha	32.70	4.00e-19	88.60
IUUC-Ogu-077977	Oryza glumaepatula	25.32	4.00e-14	72.40
IUUC-Oin-079206	Oryza indica	27.20	2.00e-24	106.00
IUUC-Olo-080621	Oryza longistaminata	24.94	4.00e-13	68.90
IUUC-Ome-081261	Oryza meridionalis	24.55	2.00e-12	66.60
IUUC-Opu-083256	Oryza punctata	23.73	2.00e-13	69.70
IUUC-Osa-085892	Oryza sativa	27.20	2.00e-24	106.00
IUUC-Ola-086701	Oryzias latipes	47.51	4.00e-92	331.00
IUUC-Olu-087593	Ostreococcus lucimarinus	24.46	1.00e-08	54.30
IUUC-Oar-089681	Ovis aries	87.39	9.00e-173	598.00
IUUC-Ptr-091142	Pan troglodytes	89.64	0.00e+00	635.00
IUUC-Pan-092435	Papio anubis	89.92	2.00e-176	610.00
IUUC-Psi-093255	Pelodiscus sinensis	69.01	2.00e-145	508.00
IUUC-Ppa-095829	Physcomitrella patens	29.70	3.00e-30	125.00
IUUC-Pfo-097339	Poecilia formosa	44.97	1.00e-85	310.00
IUUC-Pab-098274	Pongo abelii	88.80	1.00e-179	622.00
IUUC-Pop-099705	Populus trichocarpa	27.17	8.00e-28	117.00
IUUC-Pca-100451	Procavia capensis	84.55	0.00e+00	630.00
IUUC-Ppe-101220	Prunus persica	26.70	1.00e-27	117.00
IUUC-Pva-102385	Pteropus vampyrus	89.04	0.00e+00	629.00
IUUC-Rno-105765	Rattus norvegicus	83.19	5.00e-168	583.00
IUUC-Sha-106533	Sarcophilus harrisii	74.79	5.00e-159	553.00
IUUC-Smo-109248	Selaginella moellendorffii	27.18	3.00e-29	122.00
IUUC-Sit-110297	Setaria italica	25.88	3.00e-20	92.00
IUUC-Sly-111617	Solanum lycopersicum	31.71	1.00e-24	107.00
IUUC-Stu-112531	Solanum tuberosum	31.71	3.00e-24	105.00
IUUC-Sar-113647	Sorex araneus	80.90	3.00e-174	603.00
IUUC-Sbi-114621	Sorghum bicolor	27.08	1.00e-27	117.00
IUUC-Tgu-116482	Taeniopygia guttata	64.89	1.00e-123	436.00
IUUC-Tru-118622	Takifugu rubripes	48.10	1.00e-87	316.00
IUUC-Tsy-119474	Tarsius syrichta	87.11	0.00e+00	649.00
IUUC-Tni-120250	Tetraodon nigroviridis	48.91	5.00e-81	294.00
IUUC-Tca-121583	Theobroma cacao	27.03	4.00e-28	118.00
IUUC-Tae-123764	Triticum aestivum	32.49	3.00e-24	105.00
IUUC-Tur-126076	Triticum urartu	22.61	5.00e-13	68.60
IUUC-Tbe-127545	Tupaia belangeri	89.11	1.00e-179	621.00
IUUC-Ttr-128497	Tursiops truncatus	87.39	1.00e-173	602.00
IUUC-Vpa-130772	Vicugna pacos	87.96	1.00e-174	605.00
IUUC-Vvi-131632	Vitis vinifera	27.09	2.00e-31	129.00
IUUC-Xma-133432	Xiphophorus maculatus	46.84	6.00e-90	324.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence