iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSRNOG00000027542.6	ENSRNOT00000038122.6	ENSRNOP00000031960.6
ENSRNOG00000027542.6	ENSRNOT00000091863.1	ENSRNOP00000074153.1

Annotation

mRNA Expression
GEO
DNA & RNA Element
RAID2
Post-translational Modifications (PTMs)
dbPAF
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	87.16	0.00e+00	1095.00	IUUC-Mmu-063159

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Rattus norvegicus

Protein Sequence
(Fasta)

MALKHQWDMI KLSGEGSLHM RYSTNDQIAL KNLQSGVTER KLDFSKETLA SQNTRMISPV 60
VISRLIDEKK SMENGAVLSQ AIAQPQLCPP KPASARPGGV SKHRPFALSP DGLGILAPSD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCCATGTTCC TTGATTTAGC AAGGCACATC TTTGTTCGTA GATGGTCTTT GAAATGAAGT 60
AAGATGGCTT TGAAACATCA GTGGGACATG ATTAAACTGT CTGGGGAAGG TATGTGTTCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR029299--ALMS_motif
IPR029561--C10orf90

Pfam

PF15309--ALMS_motif

Gene Ontology

GO:0015629--C:actin cytoskeleton
GO:0005813--C:centrosome
GO:0005829--C:cytosol
GO:0005654--C:nucleoplasm
GO:0005886--C:plasma membrane
GO:0051393--F:alpha-actinin binding
GO:0042826--F:histone deacetylase binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001833	Ailuropoda melanoleuca	56.49	3.00e-179	621.00
IUUC-Apl-003559	Anas platyrhynchos	70.45	2.00e-39	154.00
IUUC-Aca-005337	Anolis carolinensis	37.50	1.00e-34	139.00
IUUC-Ame-011899	Astyanax mexicanus	73.75	2.00e-23	99.80
IUUC-Bta-013353	Bos taurus	58.39	0.00e+00	645.00
IUUC-Cja-019286	Callithrix jacchus	61.23	0.00e+00	718.00
IUUC-Cfa-020500	Canis familiaris	52.33	8.00e-149	520.00
IUUC-Cpo-022008	Cavia porcellus	60.77	0.00e+00	753.00
IUUC-Csa-023064	Chlorocebus sabaeus	61.92	0.00e+00	753.00
IUUC-Cho-024514	Choloepus hoffmanni	52.23	3.00e-78	286.00
IUUC-Dno-029300	Dasypus novemcinctus	54.47	7.00e-70	257.00
IUUC-Dor-030427	Dipodomys ordii	42.33	6.00e-76	278.00
IUUC-Ete-032875	Echinops telfairi	37.97	4.00e-44	172.00
IUUC-Eca-034005	Equus caballus	60.76	0.00e+00	728.00
IUUC-Eeu-035334	Erinaceus europaeus	49.74	1.00e-35	144.00
IUUC-Fca-036078	Felis catus	51.38	6.00e-165	574.00
IUUC-Fal-037368	Ficedula albicollis	65.22	2.00e-36	145.00
IUUC-Gga-041090	Gallus gallus	70.31	7.00e-39	152.00
IUUC-Ggo-045310	Gorilla gorilla	64.44	0.00e+00	758.00
IUUC-Hsa-046064	Homo sapiens	64.81	0.00e+00	768.00
IUUC-Hvu-047453	Hordeum vulgare	28.07	1.20e-01	30.00
IUUC-Itr-048926	Ictidomys tridecemlineatus	60.84	0.00e+00	702.00
IUUC-Loc-052489	Lepisosteus oculatus	74.36	4.00e-21	92.40
IUUC-Laf-053440	Loxodonta africana	50.89	2.00e-144	506.00
IUUC-Mcc-055047	Macaca mulatta	61.95	0.00e+00	753.00
IUUC-Meu-056566	Macropus eugenii	47.09	2.00e-129	456.00
IUUC-Mga-059641	Meleagris gallopavo	37.69	1.00e-78	287.00
IUUC-Mmr-061488	Microcebus murinus	55.12	2.00e-105	376.00
IUUC-Mdo-062611	Monodelphis domestica	43.55	4.00e-120	425.00
IUUC-Mmu-063159	Mus musculus	87.32	0.00e+00	1036.00
IUUC-Mpu-066208	Mustela putorius furo	53.06	4.00e-141	495.00
IUUC-Mlu-066943	Myotis lucifugus	42.09	3.00e-62	232.00
IUUC-Nle-069500	Nomascus leucogenys	63.52	0.00e+00	748.00
IUUC-Opr-070781	Ochotona princeps	52.07	1.00e-162	566.00
IUUC-Ocu-074617	Oryctolagus cuniculus	63.73	9.00e-79	286.00
IUUC-Ola-086910	Oryzias latipes	73.33	4.00e-20	89.40
IUUC-Oga-089026	Otolemur garnettii	59.22	0.00e+00	690.00
IUUC-Oar-089197	Ovis aries	57.39	0.00e+00	639.00
IUUC-Ptr-090985	Pan troglodytes	64.53	0.00e+00	763.00
IUUC-Pan-092432	Papio anubis	61.23	0.00e+00	741.00
IUUC-Psi-093653	Pelodiscus sinensis	40.97	9.00e-108	384.00
IUUC-Pab-098049	Pongo abelii	58.27	5.00e-109	388.00
IUUC-Pca-101082	Procavia capensis	75.13	3.00e-61	229.00
IUUC-Pva-102848	Pteropus vampyrus	53.67	1.00e-173	603.00
IUUC-Sha-107583	Sarcophilus harrisii	37.97	4.00e-62	232.00
IUUC-Smo-109559	Selaginella moellendorffii	22.07	4.50e-01	31.60
IUUC-Ssc-116095	Sus scrofa	58.43	0.00e+00	659.00
IUUC-Tsy-118864	Tarsius syrichta	55.91	4.00e-106	379.00
IUUC-Tbe-127637	Tupaia belangeri	58.63	0.00e+00	672.00
IUUC-Ttr-128508	Tursiops truncatus	59.67	0.00e+00	643.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence