iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017660

Ensembl Protein ID

Bra020485.1-P

UniProt Accession

M4DVE1; M4DVE1_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra020485	Bra020485.1	Bra020485.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	6.10e-41	137.6	497	535
UBD/Beta-Prp	2.40e-65	221.7	355	655

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           gH ++v c+++ ++ +++++Gs D+t+++WD+ tg +++
   Q: 497  GHLSDVDCVQWhPNcNYIATGSSDKTVRLWDVQTGECVR 535
           8***********888*********************986 PP

UBD/Beta-Prp

   S: 13   itcvkfspdksllatgsrdgtikvwdvttgkl.....................lrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcv 87
           +++  +s d+sl+a g+ d++ikvwd+ +                           l gh+++v++ +fsp g++ +++s D ti++w+ + +  +
   Q: 355  LNSSSISHDGSLVAGGFSDSSIKVWDMAKIGQagscalqdennqtvglngrrnYTLLVGHSGPVYSATFSPPGDYVLSSSADTTIRLWSTKLNANL 450
           44456678*******************997778999****************77777*************************************** PP
   S: 88   htlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsv 183
           + +kgh++ v++ +fsp g++++s shdrt+r+w ++  q l+ + +gh + v cv++hp++n++++Gs D+tvrlWd++tg+++r + g h ++v
   Q: 451  VCYKGHNHAVWDAQFSPFGHYFASCSHDRTARIWSMDRMQPLR-MMAGHLSDVDCVQWHPNCNYIATGSSDKTVRLWDVQTGECVRIFIG-HRSMV 544
           *******************************************.*********************************************9.***** PP
   S: 184  yslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdllktlqlhn.............ss 266
            sl+++++g++++sg++dgt+ +wdl+t +c+  l gh++ v+ +  s ++ +l+sgs+D ++++Wd+ s++ l++ + +n             ++
   Q: 545  LSLAMSPDGRYMASGDEDGTIMMWDLSTARCITPLMGHNSCVWTLSYSGEGSLLASGSADCTVKLWDVSSSTKLTKAEEKNgnsnrlrslrtfpTK 640
           *****************************************************************************9999999999999999999 PP
   S: 267  visvavlsfgdnvlv 281
           +++v +l+f++++l+
   Q: 641  STPVHALRFSRRNLL 655
           999999999987765 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MDPEQVDEFV MGYLKKKGFN SAAKHLQESL HNNNGSTFSS IDYHNDPELN KLIRSFSQSE 60
NDPSRYREGY SKLRSWGYNS LDLYKHELVR VMYPVFIHCY MDLVGKGHTQ EARSFFNSFR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGATCCAG AGCAAGTAGA CGAGTTCGTC ATGGGCTACT TGAAGAAGAA AGGCTTCAAC 60
AGCGCTGCTA AACATCTCCA AGAATCTCTT CACAATAACA ATGGCAGCAC CTTCAGCTCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR006594--LisH
IPR007582--TFIID_NTD2
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50896--LISH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF04494--TFIID_NTD2
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001607	Ailuropoda melanoleuca	36.04	9.00e-119	421.00
IUUC-Apl-004193	Anas platyrhynchos	34.74	5.00e-111	394.00
IUUC-Acl-008092	Aspergillus clavatus	29.86	1.00e-88	320.00
IUUC-Afu-008902	Aspergillus fumigatus	29.96	2.00e-88	320.00
IUUC-Ani-009462	Aspergillus nidulans	31.27	5.00e-76	278.00
IUUC-Ate-010271	Aspergillus terreus	30.00	4.00e-88	318.00
IUUC-Bta-013539	Bos taurus	36.11	5.00e-118	418.00
IUUC-Bol-016198	Brassica oleracea	97.30	0.00e+00	1326.00
IUUC-Cel-018451	Caenorhabditis elegans	28.38	4.00e-62	232.00
IUUC-Cja-018881	Callithrix jacchus	36.27	4.00e-117	415.00
IUUC-Cfa-020056	Canis familiaris	36.27	2.00e-117	416.00
IUUC-Csa-023045	Chlorocebus sabaeus	36.66	1.00e-113	403.00
IUUC-Dno-028863	Dasypus novemcinctus	36.27	4.00e-117	415.00
IUUC-Dor-030561	Dipodomys ordii	36.39	9.00e-117	414.00
IUUC-Eeu-034449	Erinaceus europaeus	36.02	1.00e-93	337.00
IUUC-Fca-036325	Felis catus	36.27	3.00e-117	416.00
IUUC-Fal-036604	Ficedula albicollis	35.25	1.00e-112	400.00
IUUC-Hsa-045971	Homo sapiens	36.39	6.00e-117	414.00
IUUC-Itr-048400	Ictidomys tridecemlineatus	36.11	9.00e-117	414.00
IUUC-Kpa-049402	Komagataella pastoris	35.45	6.00e-118	417.00
IUUC-Lma-053212	Leptosphaeria maculans	29.44	1.00e-69	257.00
IUUC-Laf-053859	Loxodonta africana	35.96	4.00e-117	415.00
IUUC-Mcc-054957	Macaca mulatta	37.13	2.00e-96	345.00
IUUC-Mvi-060208	Microbotryum violaceum	33.97	4.00e-93	335.00
IUUC-Mmr-061783	Microcebus murinus	37.13	2.00e-96	345.00
IUUC-Mdo-062856	Monodelphis domestica	35.67	2.00e-116	412.00
IUUC-Mmu-064218	Mus musculus	35.90	1.00e-117	416.00
IUUC-Mac-064886	Musa acuminata	59.44	3.00e-125	442.00
IUUC-Mpu-065735	Mustela putorius furo	36.27	2.00e-117	416.00
IUUC-Mlu-067544	Myotis lucifugus	36.21	7.00e-116	410.00
IUUC-Nfi-068502	Neosartorya fischeri	30.15	4.00e-89	322.00
IUUC-Nle-069389	Nomascus leucogenys	36.39	6.00e-117	414.00
IUUC-Oga-088827	Otolemur garnettii	36.08	3.00e-117	416.00
IUUC-Oar-089648	Ovis aries	36.11	5.00e-118	418.00
IUUC-Ptr-091195	Pan troglodytes	36.27	3.00e-117	416.00
IUUC-Pan-091978	Papio anubis	36.55	2.00e-117	416.00
IUUC-Pab-098771	Pongo abelii	36.39	7.00e-117	414.00
IUUC-Pva-102414	Pteropus vampyrus	32.72	2.00e-95	343.00
IUUC-Pgr-103603	Puccinia graminis	31.85	2.00e-89	323.00
IUUC-Pte-104359	Pyrenophora teres	30.78	9.00e-83	301.00
IUUC-Pyt-104523	Pyrenophora triticirepentis	30.58	9.00e-82	297.00
IUUC-Rno-105064	Rattus norvegicus	35.90	2.00e-117	416.00
IUUC-Sha-106582	Sarcophilus harrisii	35.93	8.00e-115	407.00
IUUC-Ssl-108456	Sclerotinia sclerotiorum	28.51	2.00e-79	290.00
IUUC-Tgu-116899	Taeniopygia guttata	35.57	3.00e-112	399.00
IUUC-Tvi-122626	Trichoderma virens	28.40	3.00e-74	272.00
IUUC-Tbe-127254	Tupaia belangeri	32.41	4.00e-97	348.00
IUUC-Ttr-128544	Tursiops truncatus	36.27	3.00e-117	415.00
IUUC-Uma-129379	Ustilago maydis	43.17	2.00e-71	264.00
IUUC-Vda-129761	Verticillium dahliae	26.34	2.00e-65	243.00
IUUC-Vpa-130485	Vicugna pacos	35.96	2.00e-117	416.00
IUUC-Xtr-132762	Xenopus tropicalis	31.27	6.00e-94	338.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence