iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Vvi-130881

UUCD1 version

UUC-ViV-01077

Ensembl Protein ID

VIT_04s0044g02040.t01

UniProt Accession

A5AU65; A5AU65_VITVI

Genbank Protein ID

CAN60599.1; CCB60369.1

Protein Name

Ubiquitin carboxyl-terminal hydrolase

Genbank Nucleotide ID

AM435743; FN596506

Gene Name

VIT_04s0044g02040; VITISV_027729

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VIT_04s0044g02040	VIT_04s0044g02040.t01	VIT_04s0044g02040.t01

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/UCH	1.60e-76	258.4	2	325

Active Site

Position(s)	Description	Evidence
82	Nucleophile	{ECO:0000256\|PIRSR:PIRSR038120-1}
157	Proton donor	{ECO:0000256\|PIRSR:PIRSR038120-1}

Domain Profile

DUB/UCH

   S: 7    ewleLesdPglftllvedfgvkrdiqveelysLdpenlglyqepvegllllFkinekressrksqvtsndlevvdediiktiffakqv 94
           +w+++esdPg+ft+l+++  vk++ qveelysLd ++l+ + +pv+gl++lFk+ + ++  r           v +d   ++ffa qv
   Q: 2    SWCTIESDPGVFTELIQQMQVKGV-QVEELYSLDLDSLNHL-RPVYGLIFLFKWRPGEKDDR----------LVIKDPNPNLFFASQV 77
           7***********************.****************.**************999998..........44567789******** PP
   S: 95   igNsCatyAllsvllncedklldlGttlsrlkestkaespenkalalgnqqvlecihnslariesrseperqdedneqytkeafhfvs 182
           i+N+Cat+A+ls l nc d+  d+G++ls lke+tk + pe k+la++n+++++ +hns+ar+e++  +e++++ +   +++++hf+s
   Q: 78   INNACATQAILSILMNCPDV--DIGPELSMLKEFTKNFPPELKGLAINNSEAIRTAHNSFARPEPFVPEEQKAAGK---DDDVYHFIS 160
           ********************..********************************************9888886665...9******** PP
   S: 183  yvningrlyeldglkpfPldlgkk...keteelkdklkvvraflerikllesdeirfnllaivadrrviktlrlnvlkid........ 259
           y +++g lyeldglk+ P+ lg++   + + ++   ++ v+   eri+ ++  eirfnl+ai ++r+ i+t  l+ l+          
   Q: 161  YLPVDGILYELDGLKEGPISLGQCpggQGDLDWVRMVQPVI--QERIERYSRSEIRFNLMAIIKNRKDIYTGELKELQKRrehilhql 246
           ***********************976566778888888888..****************************99986666579****** PP
   S: 260  ..............keLlkLlkdieseeekieaqlddekekrkkfkiddirRtenydeficifikdlaregilrklvee 324
                         + L k l+++++ +e   +++  e+ek kk+  ++irR++ny  f++ f+k la++++l+ l e+
   Q: 247  aalqsermvdnsniEALNKSLSEVNAGIEGATEKILMEEEKFKKWRTENIRRKHNYIPFLFNFLKILAEKKQLKPLIEK 325
           ************999999*********************************************************9998 PP

Organism

Vitis vinifera

Protein Sequence
(Fasta)

MSWCTIESDP GVFTELIQQM QVKGVQVEEL YSLDLDSLNH LRPVYGLIFL FKWRPGEKDD 60
RLVIKDPNPN LFFASQVINN ACATQAILSI LMNCPDVDIG PELSMLKEFT KNFPPELKGL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ACACCAAAGC ATCGTATCGT TCCTCCTCCA AACGCTGCGT TTCGGTCTAT CTCTGAGTTC 60
CAAGGTATTG TTCCAATCTC TGTTTCCAAT TCAATCAATC GACTTCTACG TTGGATACAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0378--Hydrolase
KW-0645--Protease
KW-1185--Reference proteome
KW-0788--Thiol protease
KW-0833--Ubl conjugation pathway

Interpro

IPR001578--Peptidase_C12_UCH
IPR017390--Ubiquitinyl_hydrolase_UCH37

Pfam

PF01088--Peptidase_C12

PRINTS

PR00707--UBCTHYDRLASE

Gene Ontology

GO:0005737--C:cytoplasm
GO:0004843--F:thiol-dependent ubiquitin-specific protease activity
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

KEGG

vvi:100251772

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000936	Aegilops tauschii	75.08	3.00e-145	506.00
IUUC-Aml-001866	Ailuropoda melanoleuca	50.61	3.00e-87	314.00
IUUC-Atr-002966	Amborella trichopoda	81.44	7.00e-153	532.00
IUUC-Apl-003306	Anas platyrhynchos	46.67	8.00e-82	296.00
IUUC-Aca-004763	Anolis carolinensis	50.61	7.00e-87	312.00
IUUC-Aly-005581	Arabidopsis lyrata	77.54	5.00e-142	496.00
IUUC-Ath-007283	Arabidopsis thaliana	76.35	5.00e-144	502.00
IUUC-Ago-007999	Ashbya gossypii	36.59	2.00e-31	129.00
IUUC-Acl-008231	Aspergillus clavatus	51.26	1.00e-62	232.00
IUUC-Afl-008557	Aspergillus flavus	41.88	2.00e-59	221.00
IUUC-Afu-008988	Aspergillus fumigatus	51.05	3.00e-61	227.00
IUUC-Ani-009420	Aspergillus nidulans	40.82	1.00e-60	225.00
IUUC-Ang-009859	Aspergillus niger	48.97	2.00e-57	214.00
IUUC-Aor-010145	Aspergillus oryzae	41.88	2.00e-59	221.00
IUUC-Ate-010347	Aspergillus terreus	48.44	1.00e-59	222.00
IUUC-Ame-010791	Astyanax mexicanus	49.85	1.00e-89	322.00
IUUC-Bgr-012298	Blumeria graminis	39.82	4.00e-57	213.00
IUUC-Bta-013251	Bos taurus	50.31	9.00e-88	315.00
IUUC-Bci-013786	Botrytis cinerea	39.94	3.00e-61	227.00
IUUC-Bdi-014132	Brachypodium distachyon	75.68	6.00e-140	489.00
IUUC-Bol-015611	Brassica oleracea	77.84	7.00e-146	508.00
IUUC-Bra-017769	Brassica rapa	78.14	9.00e-146	508.00
IUUC-Cel-018604	Caenorhabditis elegans	43.16	5.00e-70	256.00
IUUC-Cja-019768	Callithrix jacchus	46.33	1.00e-81	295.00
IUUC-Cfa-020207	Canis familiaris	50.61	3.00e-87	314.00
IUUC-Cpo-021925	Cavia porcellus	48.47	4.00e-81	293.00
IUUC-Cre-022919	Chlamydomonas reinhardtii	50.76	1.00e-83	302.00
IUUC-Csa-023958	Chlorocebus sabaeus	50.61	5.00e-87	313.00
IUUC-Cho-024928	Choloepus hoffmanni	58.11	9.00e-20	89.70
IUUC-Cin-025771	Ciona intestinalis	41.50	2.00e-67	248.00
IUUC-Csv-026149	Ciona savignyi	43.75	1.00e-71	262.00
IUUC-Cgl-026424	Colletotrichum gloeosporioides	36.92	7.00e-49	186.00
IUUC-Cne-026955	Cryptococcus neoformans	32.39	2.00e-44	171.00
IUUC-Cme-027104	Cyanidioschyzon merolae	31.01	2.00e-44	172.00
IUUC-Dre-027409	Danio rerio	49.26	7.00e-89	319.00
IUUC-Dno-028921	Dasypus novemcinctus	50.61	5.00e-87	313.00
IUUC-Dor-030891	Dipodomys ordii	46.11	1.00e-37	150.00
IUUC-Dse-031170	Dothistroma septosporum	38.51	1.00e-58	219.00
IUUC-Dme-031677	Drosophila melanogaster	47.13	5.00e-80	290.00
IUUC-Ete-032646	Echinops telfairi	45.09	2.00e-44	173.00
IUUC-Eca-033776	Equus caballus	49.67	1.00e-78	285.00
IUUC-Eeu-035305	Erinaceus europaeus	45.05	3.00e-39	154.00
IUUC-Fca-035846	Felis catus	46.74	1.00e-82	298.00
IUUC-Fal-037597	Ficedula albicollis	48.53	3.00e-75	273.00
IUUC-Fox-037670	Fusarium oxysporum	48.70	2.00e-53	201.00
IUUC-Fso-038243	Fusarium solani	49.57	2.00e-53	201.00
IUUC-Gmo-038499	Gadus morhua	45.40	2.00e-78	285.00
IUUC-Ggr-039975	Gaeumannomyces graminis	45.68	9.00e-53	199.00
IUUC-Gga-040904	Gallus gallus	50.74	2.00e-91	327.00
IUUC-Gac-042058	Gasterosteus aculeatus	49.08	2.00e-86	311.00
IUUC-Gma-043030	Glycine max	90.12	3.00e-175	606.00
IUUC-Ggo-044699	Gorilla gorilla	47.17	2.00e-75	275.00
IUUC-Hsa-046227	Homo sapiens	50.61	2.00e-87	314.00
IUUC-Hvu-047359	Hordeum vulgare	74.47	4.00e-143	499.00
IUUC-Itr-048989	Ictidomys tridecemlineatus	46.50	2.00e-82	298.00
IUUC-Lch-049829	Latimeria chalumnae	50.61	5.00e-87	313.00
IUUC-Lpe-050899	Leersia perrieri	77.47	2.00e-137	481.00
IUUC-Loc-052264	Lepisosteus oculatus	49.54	3.00e-85	307.00
IUUC-Lma-053110	Leptosphaeria maculans	50.88	1.00e-53	202.00
IUUC-Laf-053639	Loxodonta africana	50.61	3.00e-87	314.00
IUUC-Mcc-055506	Macaca mulatta	50.61	6.00e-87	313.00
IUUC-Meu-056267	Macropus eugenii	44.83	2.00e-50	193.00
IUUC-Mor-057001	Magnaporthe oryzae	48.07	1.00e-56	212.00
IUUC-Mpo-057608	Magnaporthe poae	47.06	4.00e-37	146.00
IUUC-Mtr-057731	Medicago truncatula	87.13	4.00e-163	566.00
IUUC-Mla-059016	Melampsora laricipopulina	47.24	1.00e-45	175.00
IUUC-Mga-060178	Meleagris gallopavo	50.16	2.00e-82	298.00
IUUC-Mvi-060353	Microbotryum violaceum	38.51	8.00e-55	206.00
IUUC-Mmr-060738	Microcebus murinus	50.92	1.00e-87	315.00
IUUC-Mdo-062266	Monodelphis domestica	53.85	5.00e-63	232.00
IUUC-Mmu-063619	Mus musculus	50.92	2.00e-87	315.00
IUUC-Mac-065301	Musa acuminata	84.94	1.00e-166	577.00
IUUC-Mpu-066058	Mustela putorius furo	50.61	2.00e-87	314.00
IUUC-Mlu-067292	Myotis lucifugus	49.69	8.00e-87	312.00
IUUC-Nfi-068275	Neosartorya fischeri	40.29	2.00e-62	231.00
IUUC-Ncr-068713	Neurospora crassa	39.10	2.00e-58	218.00
IUUC-Nle-069013	Nomascus leucogenys	50.61	3.00e-87	314.00
IUUC-Opr-070628	Ochotona princeps	44.89	1.00e-76	279.00
IUUC-Ont-072688	Oreochromis niloticus	48.62	2.00e-85	308.00
IUUC-Oan-073004	Ornithorhynchus anatinus	53.18	6.00e-66	242.00
IUUC-Ocu-074303	Oryctolagus cuniculus	50.61	3.00e-87	315.00
IUUC-Oba-075002	Oryza barthii	77.78	2.00e-143	501.00
IUUC-Obr-076392	Oryza brachyantha	75.62	8.00e-139	485.00
IUUC-Ogl-077271	Oryza glaberrima	77.78	2.00e-143	501.00
IUUC-Ogu-078493	Oryza glumaepatula	78.08	1.00e-144	504.00
IUUC-Oin-080084	Oryza indica	78.08	1.00e-144	504.00
IUUC-Olo-080803	Oryza longistaminata	77.78	4.00e-144	503.00
IUUC-Ome-081146	Oryza meridionalis	77.48	4.00e-143	499.00
IUUC-Oni-082146	Oryza nivara	78.08	1.00e-144	504.00
IUUC-Opu-083633	Oryza punctata	77.78	5.00e-139	486.00
IUUC-Oru-084789	Oryza rufipogon	78.08	1.00e-144	504.00
IUUC-Osa-086196	Oryza sativa	78.08	1.00e-144	504.00
IUUC-Ola-087126	Oryzias latipes	48.16	2.00e-85	308.00
IUUC-Olu-087665	Ostreococcus lucimarinus	45.10	3.00e-73	267.00
IUUC-Oga-089140	Otolemur garnettii	47.03	1.00e-82	299.00
IUUC-Oar-090296	Ovis aries	50.77	2.00e-86	311.00
IUUC-Ptr-090566	Pan troglodytes	50.61	2.00e-87	314.00
IUUC-Pan-092052	Papio anubis	50.61	5.00e-87	313.00
IUUC-Psi-093723	Pelodiscus sinensis	49.19	2.00e-78	284.00
IUUC-Pma-094568	Petromyzon marinus	50.46	1.00e-62	232.00
IUUC-Pno-095120	Phaeosphaeria nodorum	50.00	6.00e-55	206.00
IUUC-Ppa-095761	Physcomitrella patens	73.39	1.00e-140	491.00
IUUC-Pfo-096210	Poecilia formosa	49.69	3.00e-87	314.00
IUUC-Pab-098463	Pongo abelii	50.61	2.00e-87	314.00
IUUC-Pop-099109	Populus trichocarpa	87.72	1.00e-171	594.00
IUUC-Pca-100108	Procavia capensis	53.11	3.00e-71	261.00
IUUC-Ppe-101176	Prunus persica	90.42	7.00e-174	602.00
IUUC-Pva-102629	Pteropus vampyrus	53.56	7.00e-73	266.00
IUUC-Pgr-103419	Puccinia graminis	46.03	2.00e-56	211.00
IUUC-Pte-104207	Pyrenophora teres	52.73	2.00e-39	154.00
IUUC-Pyt-104471	Pyrenophora triticirepentis	51.32	1.00e-58	218.00
IUUC-Rno-105579	Rattus norvegicus	43.99	6.00e-75	273.00
IUUC-Sha-106894	Sarcophilus harrisii	50.69	2.00e-75	274.00
IUUC-Sja-107732	Schizosaccharomyces japonicus	41.40	3.00e-62	231.00
IUUC-Spo-108371	Schizosaccharomyces pombe	42.69	2.00e-70	258.00
IUUC-Ssl-108467	Sclerotinia sclerotiorum	37.70	7.00e-49	186.00
IUUC-Smo-109396	Selaginella moellendorffii	75.23	2.00e-138	483.00
IUUC-Sit-110630	Setaria italica	76.28	7.00e-144	502.00
IUUC-Sly-110972	Solanum lycopersicum	88.25	6.00e-169	585.00
IUUC-Stu-112185	Solanum tuberosum	89.22	0.00e+00	628.00
IUUC-Sar-113294	Sorex araneus	44.60	7.00e-75	273.00
IUUC-Sbi-113951	Sorghum bicolor	76.58	2.00e-144	504.00
IUUC-Ssc-115501	Sus scrofa	49.21	1.00e-80	292.00
IUUC-Tgu-117152	Taeniopygia guttata	48.53	3.00e-75	273.00
IUUC-Tru-118388	Takifugu rubripes	48.77	9.00e-87	312.00
IUUC-Tsy-119109	Tarsius syrichta	50.61	2.00e-87	314.00
IUUC-Tni-120048	Tetraodon nigroviridis	48.77	9.00e-87	312.00
IUUC-Tca-121750	Theobroma cacao	89.85	0.00e+00	634.00
IUUC-Tre-122130	Trichoderma reesei	46.55	1.00e-54	205.00
IUUC-Tvi-122284	Trichoderma virens	40.26	2.00e-54	205.00
IUUC-Tae-124082	Triticum aestivum	75.08	7.00e-145	505.00
IUUC-Tur-126366	Triticum urartu	64.60	8.00e-109	386.00
IUUC-Tme-127187	Tuber melanosporum	41.76	1.00e-68	252.00
IUUC-Tbe-127619	Tupaia belangeri	44.12	7.00e-60	223.00
IUUC-Ttr-128867	Tursiops truncatus	46.96	2.00e-60	224.00
IUUC-Vda-129912	Verticillium dahliae	38.14	2.00e-55	207.00
IUUC-Vpa-130552	Vicugna pacos	53.62	2.00e-62	231.00
IUUC-Xtr-131934	Xenopus tropicalis	49.85	9.00e-90	322.00
IUUC-Xma-133312	Xiphophorus maculatus	49.69	4.00e-87	313.00
IUUC-Yli-134487	Yarrowia lipolytica	33.24	2.00e-52	198.00
IUUC-Zma-135462	Zea mays	64.85	4.00e-116	410.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence