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Basic Information Integrated Annotations
Tag Content
iUUCD ID IUUC-Sce-106258
Ensembl Protein ID YJL069C
UniProt Accession P40362; D6VWB4; UTP18_YEAST
Genbank Protein ID CAA84053.1; CAA89360.1; CAA61308.1; AAT92579.1; DAA08730.1
Protein Name U3 small nucleolar RNA-associated protein 18; U three protein 18
Genbank Nucleotide ID Z34288; Z49344; X88851; AY692560; BK006943
Gene Name UTP18; YJL069C; HRE594; J1098
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
YJL069C YJL069C YJL069C
Annotation
mRNA Expression
GEOFFGED
Protein-protein Interaction
IIDiRefIndexHINTMentha
Post-translational Modifications (PTMs)
CPLMdbPAFdbPTMUniProt
PHOSIDABioGRID
Protein Expression/Proteomics
GPMDB
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 2.40e-11 41.9 563 591
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD
   S: 4    dsvtclaf.sd.tllvsGsdDgtikvWDl 30
           ++vt++af ++ +ll++G+  g++++W l
   Q: 563  GKVTSVAFsPSgGLLAVGNEQGKVRLWKL 591
           68*******666***************96 PP
   
Organism Saccharomyces cerevisiae
Functional Description
(View)

Functional Description


     Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
 Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
Protein Sequence
(Fasta)
MTMATTAMNV SVPPPDEEEQ LLAKFVFGDT TDLQENLAKF NADFIFNEQE MDVEDQEDEG 60
SESDNSEEDE AQNGELDHVN NDQLFFVDDG GNEDSQDKNE DTMDVDDEDD SSSDDYSEDS 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Sce-106258|E3,WD_repeat|Saccharomyces cerevisiae
Please wait for a moment...
Nucleotide Sequence
(Fasta)
ATGACAATGG CAACAACCGC AATGAATGTT AGCGTACCTC CACCAGATGA AGAAGAACAG 60
TTACTAGCCA AATTTGTATT CGGTGATACA ACAGATTTAC AAGAAAATCT CGCTAAATTT 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Sce-106258|E3,WD_repeat|Saccharomyces cerevisiae
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-0539--Nucleus
KW-0597--Phosphoprotein
KW-1185--Reference proteome
KW-0677--Repeat
KW-0687--Ribonucleoprotein
KW-0690--Ribosome biogenesis
KW-0698--rRNA processing
KW-0853--WD repeat
Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom
PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
Pfam

PF00400--WD40
SMART

SM00320--WD40
Gene Ontology

GO:0005730--C:nucleolus
GO:0005654--C:nucleoplasm
GO:0034388--C:Pwp2p-containing subcomplex of 90S preribosome
GO:0032040--C:small-subunit processome
GO:0000480--P:endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000447--P:endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000472--P:endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0031167--P:rRNA methylation
KEGG sce:YJL069C
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000184 Aegilops tauschii 30.08 9.00e-49 186.00
IUUC-Aml-002252 Ailuropoda melanoleuca 27.39 8.00e-41 159.00
IUUC-Atr-002575 Amborella trichopoda 31.14 7.00e-53 199.00
IUUC-Aly-006512 Arabidopsis lyrata 31.50 4.00e-51 193.00
IUUC-Ath-007244 Arabidopsis thaliana 31.71 6.00e-51 192.00
IUUC-Ago-007895 Ashbya gossypii 60.46 1.00e-180 624.00
IUUC-Acl-008343 Aspergillus clavatus 38.20 1.00e-74 272.00
IUUC-Afl-008445 Aspergillus flavus 35.11 5.00e-87 313.00
IUUC-Aor-009986 Aspergillus oryzae 35.47 5.00e-86 309.00
IUUC-Ame-011338 Astyanax mexicanus 26.82 8.00e-36 142.00
IUUC-Bgr-012201 Blumeria graminis 32.47 1.00e-69 254.00
IUUC-Bta-013058 Bos taurus 27.39 6.00e-39 153.00
IUUC-Bci-013619 Botrytis cinerea 32.78 5.00e-74 270.00
IUUC-Bdi-014771 Brachypodium distachyon 29.09 2.00e-46 178.00
IUUC-Bol-015230 Brassica oleracea 32.68 5.00e-48 183.00
IUUC-Bra-017041 Brassica rapa 32.24 4.00e-46 177.00
IUUC-Cel-018293 Caenorhabditis elegans 22.87 1.00e-26 112.00
IUUC-Cja-019503 Callithrix jacchus 27.39 1.00e-40 158.00
IUUC-Cfa-020743 Canis familiaris 27.93 2.00e-40 158.00
IUUC-Cpo-021488 Cavia porcellus 28.68 1.00e-41 162.00
IUUC-Cre-022926 Chlamydomonas reinhardtii 28.17 3.00e-50 190.00
IUUC-Csa-023110 Chlorocebus sabaeus 27.39 3.00e-40 157.00
IUUC-Cin-025208 Ciona intestinalis 25.68 1.00e-29 121.00
IUUC-Cme-027351 Cyanidioschyzon merolae 27.81 1.00e-42 165.00
IUUC-Dre-027524 Danio rerio 22.64 2.00e-20 92.00
IUUC-Dno-029243 Dasypus novemcinctus 27.65 1.00e-40 158.00
IUUC-Dor-030110 Dipodomys ordii 28.29 1.00e-40 159.00
IUUC-Dse-031217 Dothistroma septosporum 33.77 5.00e-71 259.00
IUUC-Dme-031999 Drosophila melanogaster 25.21 9.00e-30 122.00
IUUC-Eca-034350 Equus caballus 27.65 6.00e-40 156.00
IUUC-Eeu-034991 Erinaceus europaeus 28.21 4.00e-38 150.00
IUUC-Fal-036614 Ficedula albicollis 26.47 5.00e-32 130.00
IUUC-Gmo-039183 Gadus morhua 26.86 1.00e-38 152.00
IUUC-Gga-040922 Gallus gallus 24.63 3.00e-34 137.00
IUUC-Gac-041475 Gasterosteus aculeatus 28.99 8.00e-33 132.00
IUUC-Gma-043598 Glycine max 31.57 1.00e-56 212.00
IUUC-Ggo-044517 Gorilla gorilla 27.65 6.00e-41 159.00
IUUC-Hsa-045741 Homo sapiens 27.65 7.00e-41 159.00
IUUC-Hvu-047463 Hordeum vulgare 37.72 2.00e-19 86.70
IUUC-Itr-048128 Ictidomys tridecemlineatus 28.50 1.00e-42 165.00
IUUC-Kpa-049335 Komagataella pastoris 40.74 4.00e-105 373.00
IUUC-Lch-049816 Latimeria chalumnae 27.91 1.00e-31 128.00
IUUC-Lpe-051140 Leersia perrieri 28.90 5.00e-44 170.00
IUUC-Loc-051942 Lepisosteus oculatus 29.64 6.00e-33 133.00
IUUC-Laf-054245 Loxodonta africana 27.58 7.00e-41 159.00
IUUC-Meu-056300 Macropus eugenii 24.60 3.00e-28 117.00
IUUC-Mor-057184 Magnaporthe oryzae 30.27 3.00e-57 214.00
IUUC-Mtr-058019 Medicago truncatula 32.33 1.00e-50 191.00
IUUC-Mga-060179 Meleagris gallopavo 26.36 6.00e-34 135.00
IUUC-Mvi-060435 Microbotryum violaceum 29.89 2.00e-37 148.00
IUUC-Mdo-062187 Monodelphis domestica 27.11 6.00e-36 143.00
IUUC-Mmu-063386 Mus musculus 29.46 6.00e-44 169.00
IUUC-Mpu-066084 Mustela putorius furo 28.17 7.00e-41 159.00
IUUC-Mlu-068130 Myotis lucifugus 28.68 5.00e-42 163.00
IUUC-Nle-069743 Nomascus leucogenys 27.76 5.00e-38 150.00
IUUC-Opr-071111 Ochotona princeps 27.46 3.00e-41 160.00
IUUC-Ont-071979 Oreochromis niloticus 27.01 2.00e-38 151.00
IUUC-Ocu-073754 Oryctolagus cuniculus 27.98 3.00e-42 164.00
IUUC-Oba-075007 Oryza barthii 29.96 1.00e-46 179.00
IUUC-Obr-076447 Oryza brachyantha 29.54 4.00e-48 183.00
IUUC-Ogl-077733 Oryza glaberrima 29.96 6.00e-47 179.00
IUUC-Ogu-078828 Oryza glumaepatula 29.96 9.00e-47 179.00
IUUC-Oin-080152 Oryza indica 29.75 1.00e-46 179.00
IUUC-Olo-080983 Oryza longistaminata 29.75 3.00e-46 177.00
IUUC-Oni-082443 Oryza nivara 29.75 2.00e-46 178.00
IUUC-Opu-083771 Oryza punctata 30.17 2.00e-45 175.00
IUUC-Oru-084272 Oryza rufipogon 29.75 2.00e-46 178.00
IUUC-Osa-085885 Oryza sativa 29.75 8.00e-47 179.00
IUUC-Olu-087644 Ostreococcus lucimarinus 23.68 8.00e-17 79.30
IUUC-Oga-088834 Otolemur garnettii 27.91 3.00e-41 161.00
IUUC-Oar-089712 Ovis aries 27.13 1.00e-38 152.00
IUUC-Pan-092561 Papio anubis 27.91 2.00e-41 161.00
IUUC-Ppa-095397 Physcomitrella patens 33.54 1.00e-52 198.00
IUUC-Pfo-097068 Poecilia formosa 28.53 2.00e-41 161.00
IUUC-Pop-099471 Populus trichocarpa 33.61 3.00e-46 177.00
IUUC-Ppe-101446 Prunus persica 30.45 4.00e-53 200.00
IUUC-Pva-102851 Pteropus vampyrus 27.20 9.00e-38 149.00
IUUC-Pgr-103370 Puccinia graminis 29.09 6.00e-50 189.00
IUUC-Ptt-103838 Puccinia triticina 27.56 1.00e-39 155.00
IUUC-Rno-104910 Rattus norvegicus 29.46 2.00e-43 167.00
IUUC-Sja-107746 Schizosaccharomyces japonicus 38.42 2.00e-101 360.00
IUUC-Spo-108268 Schizosaccharomyces pombe 42.68 8.00e-95 338.00
IUUC-Smo-108815 Selaginella moellendorffii 32.70 6.00e-49 186.00
IUUC-Sit-109706 Setaria italica 29.03 7.00e-47 179.00
IUUC-Sly-111533 Solanum lycopersicum 31.38 6.00e-54 202.00
IUUC-Stu-112853 Solanum tuberosum 31.80 3.00e-54 204.00
IUUC-Sbi-114747 Sorghum bicolor 29.45 4.00e-50 190.00
IUUC-Ssc-115916 Sus scrofa 27.91 2.00e-41 161.00
IUUC-Tgu-117291 Taeniopygia guttata 27.27 3.00e-34 137.00
IUUC-Tru-118724 Takifugu rubripes 26.86 1.00e-38 152.00
IUUC-Tsy-118928 Tarsius syrichta 30.80 3.00e-28 117.00
IUUC-Tca-121229 Theobroma cacao 33.26 1.00e-56 212.00
IUUC-Tae-125218 Triticum aestivum 30.08 1.00e-48 185.00
IUUC-Tur-126082 Triticum urartu 37.69 1.00e-20 92.00
IUUC-Ttr-128904 Tursiops truncatus 27.47 2.00e-31 128.00
IUUC-Vpa-130817 Vicugna pacos 27.72 1.00e-42 165.00
IUUC-Vvi-131395 Vitis vinifera 31.72 3.00e-55 207.00
IUUC-Xtr-132971 Xenopus tropicalis 25.11 3.00e-35 141.00
IUUC-Xma-133391 Xiphophorus maculatus 28.00 5.00e-41 160.00
IUUC-Yli-134613 Yarrowia lipolytica 36.57 5.00e-86 309.00
Created Date 25-Jun-2017

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