iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ocu-074095

Ensembl Protein ID

ENSOCUP00000009419.3

UniProt Accession

G1T0B2; G1T0B2_RABIT

Genbank Protein ID

ENSOCUP00000009419

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AAGW02034261

Gene Name

NEDD1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSOCUG00000010944.3	ENSOCUT00000010947.3	ENSOCUP00000009419.3

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	7.30e-21	73.5	83	113

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 7    tclaf.sd.tllvsGsdDgtikvWDlrtgvl 35
           tc+++ s+  +lvsG+ ++t+ +WDl++ ++
   Q: 83   TCVSLnSTsMYLVSGGLNNTVNIWDLKSKRV 113
           79999866699**************998765 PP

Organism

Oryctolagus cuniculus

Protein Sequence
(Fasta)

AVMQENLRFA SSGDDIKIWD ASSMTLVDKF NPHTSPHGIS SLCWSSNNNF LVTASSSGDK 60
IVVSSCKCKP VPLLELAEGQ KQTCVSLNST SMYLVSGGLN NTVNIWDLKS KRVHRSLKDH 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGACATTTCT GGTTTTTAAG TTGCAAGTGG TATTATTTGC TCTCCATGGC TGCTTCCTCA 60
AGGAATTCTT TCCTAAACCT ATATCCATGT TAATTTCCTT TACCGTTCAC ACATCTTGTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0045177--C:apical part of cell
GO:0005814--C:centriole
GO:0036064--C:ciliary basal body
GO:0000242--C:pericentriolar material
GO:0000922--C:spindle pole

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000871	Aegilops tauschii	37.27	1.00e-16	82.00
IUUC-Aml-002397	Ailuropoda melanoleuca	90.03	0.00e+00	1189.00
IUUC-Atr-002464	Amborella trichopoda	31.53	2.00e-38	154.00
IUUC-Apl-003870	Anas platyrhynchos	67.16	0.00e+00	872.00
IUUC-Aca-004925	Anolis carolinensis	60.42	0.00e+00	766.00
IUUC-Aly-005931	Arabidopsis lyrata	31.33	2.00e-39	157.00
IUUC-Ath-006681	Arabidopsis thaliana	31.23	8.00e-39	155.00
IUUC-Ame-010906	Astyanax mexicanus	44.48	3.00e-150	525.00
IUUC-Bta-013389	Bos taurus	90.15	0.00e+00	1179.00
IUUC-Bdi-014340	Brachypodium distachyon	28.18	6.00e-38	152.00
IUUC-Bol-016282	Brassica oleracea	31.02	2.00e-39	157.00
IUUC-Bra-017178	Brassica rapa	31.02	1.00e-39	157.00
IUUC-Cja-019541	Callithrix jacchus	90.15	0.00e+00	1207.00
IUUC-Cfa-021218	Canis familiaris	89.43	0.00e+00	1177.00
IUUC-Cpo-021697	Cavia porcellus	83.66	0.00e+00	1103.00
IUUC-Csa-023620	Chlorocebus sabaeus	90.76	0.00e+00	1241.00
IUUC-Cho-025105	Choloepus hoffmanni	84.74	0.00e+00	915.00
IUUC-Cin-025293	Ciona intestinalis	41.14	8.00e-63	234.00
IUUC-Csv-026234	Ciona savignyi	35.50	2.00e-50	192.00
IUUC-Dre-028251	Danio rerio	63.21	1.00e-104	374.00
IUUC-Dno-029281	Dasypus novemcinctus	88.55	0.00e+00	972.00
IUUC-Dor-031020	Dipodomys ordii	75.24	2.00e-171	595.00
IUUC-Ete-033113	Echinops telfairi	85.38	0.00e+00	683.00
IUUC-Eca-034230	Equus caballus	91.23	0.00e+00	1181.00
IUUC-Eeu-034671	Erinaceus europaeus	73.84	0.00e+00	775.00
IUUC-Fca-035775	Felis catus	91.82	0.00e+00	1217.00
IUUC-Fal-037557	Ficedula albicollis	64.20	0.00e+00	786.00
IUUC-Gmo-038586	Gadus morhua	60.07	9.00e-103	367.00
IUUC-Gga-040153	Gallus gallus	66.47	0.00e+00	870.00
IUUC-Gac-041385	Gasterosteus aculeatus	43.07	2.00e-134	473.00
IUUC-Gma-042844	Glycine max	31.03	2.00e-41	164.00
IUUC-Ggo-044576	Gorilla gorilla	91.24	0.00e+00	1253.00
IUUC-Hsa-046198	Homo sapiens	91.39	0.00e+00	1254.00
IUUC-Hvu-047794	Hordeum vulgare	37.27	7.00e-17	79.70
IUUC-Lch-050561	Latimeria chalumnae	51.05	7.00e-163	567.00
IUUC-Lpe-051469	Leersia perrieri	31.16	4.00e-36	146.00
IUUC-Loc-052816	Lepisosteus oculatus	49.44	5.00e-158	551.00
IUUC-Laf-053880	Loxodonta africana	87.90	0.00e+00	1115.00
IUUC-Mcc-054977	Macaca mulatta	91.06	0.00e+00	1243.00
IUUC-Meu-056141	Macropus eugenii	61.91	2.00e-169	589.00
IUUC-Mtr-058441	Medicago truncatula	32.20	2.00e-40	160.00
IUUC-Mga-060141	Meleagris gallopavo	64.56	0.00e+00	833.00
IUUC-Mmr-061201	Microcebus murinus	91.36	0.00e+00	1244.00
IUUC-Mdo-061855	Monodelphis domestica	74.07	0.00e+00	958.00
IUUC-Mmu-064342	Mus musculus	86.36	0.00e+00	1149.00
IUUC-Mac-065368	Musa acuminata	29.16	2.00e-37	150.00
IUUC-Mpu-066191	Mustela putorius furo	89.85	0.00e+00	1182.00
IUUC-Mlu-067310	Myotis lucifugus	89.24	0.00e+00	1161.00
IUUC-Nle-069990	Nomascus leucogenys	91.67	0.00e+00	1256.00
IUUC-Opr-070336	Ochotona princeps	85.15	0.00e+00	1088.00
IUUC-Ont-071675	Oreochromis niloticus	46.27	1.00e-144	506.00
IUUC-Oan-072772	Ornithorhynchus anatinus	71.33	0.00e+00	787.00
IUUC-Oba-075327	Oryza barthii	30.39	5.00e-37	149.00
IUUC-Obr-076119	Oryza brachyantha	28.23	2.00e-37	151.00
IUUC-Ogl-077820	Oryza glaberrima	29.51	2.00e-36	147.00
IUUC-Ogu-078679	Oryza glumaepatula	30.00	4.00e-37	149.00
IUUC-Oin-079891	Oryza indica	29.80	3.00e-37	150.00
IUUC-Olo-080414	Oryza longistaminata	32.82	4.00e-36	146.00
IUUC-Ome-081888	Oryza meridionalis	30.09	2.00e-37	150.00
IUUC-Oni-082417	Oryza nivara	29.80	4.00e-37	149.00
IUUC-Opu-083393	Oryza punctata	30.07	4.00e-37	149.00
IUUC-Oru-084698	Oryza rufipogon	29.80	2.00e-37	151.00
IUUC-Osa-086121	Oryza sativa	29.80	4.00e-37	149.00
IUUC-Ola-086806	Oryzias latipes	41.07	5.00e-141	494.00
IUUC-Olu-087591	Ostreococcus lucimarinus	23.55	3.00e-15	76.30
IUUC-Oga-088622	Otolemur garnettii	88.82	0.00e+00	1194.00
IUUC-Oar-090391	Ovis aries	87.18	0.00e+00	1015.00
IUUC-Ptr-091036	Pan troglodytes	91.24	0.00e+00	1253.00
IUUC-Pan-092576	Papio anubis	91.36	0.00e+00	1248.00
IUUC-Psi-093450	Pelodiscus sinensis	69.10	0.00e+00	880.00
IUUC-Pma-094101	Petromyzon marinus	55.31	3.00e-105	374.00
IUUC-Ppa-095636	Physcomitrella patens	32.79	2.00e-41	164.00
IUUC-Pfo-097142	Poecilia formosa	60.00	1.00e-109	390.00
IUUC-Pab-097829	Pongo abelii	91.36	0.00e+00	1247.00
IUUC-Pop-099687	Populus trichocarpa	31.75	1.00e-39	158.00
IUUC-Pca-100217	Procavia capensis	84.10	0.00e+00	701.00
IUUC-Ppe-101502	Prunus persica	30.79	4.00e-40	159.00
IUUC-Pva-102736	Pteropus vampyrus	89.09	0.00e+00	1172.00
IUUC-Rno-104977	Rattus norvegicus	86.06	0.00e+00	1093.00
IUUC-Sha-107003	Sarcophilus harrisii	73.17	0.00e+00	949.00
IUUC-Smo-109328	Selaginella moellendorffii	28.99	3.00e-41	163.00
IUUC-Sit-109796	Setaria italica	28.07	1.00e-36	147.00
IUUC-Sly-110941	Solanum lycopersicum	29.25	3.00e-36	147.00
IUUC-Stu-112314	Solanum tuberosum	29.87	7.00e-37	149.00
IUUC-Sar-112926	Sorex araneus	81.36	0.00e+00	1074.00
IUUC-Sbi-113822	Sorghum bicolor	28.80	1.00e-26	114.00
IUUC-Ssc-116242	Sus scrofa	90.08	0.00e+00	652.00
IUUC-Tgu-116765	Taeniopygia guttata	65.07	0.00e+00	808.00
IUUC-Tru-117738	Takifugu rubripes	42.68	4.00e-150	525.00
IUUC-Tsy-118856	Tarsius syrichta	84.88	0.00e+00	1067.00
IUUC-Tni-120871	Tetraodon nigroviridis	44.54	2.00e-151	529.00
IUUC-Tca-120965	Theobroma cacao	30.38	2.00e-38	154.00
IUUC-Tae-123588	Triticum aestivum	31.05	1.00e-38	154.00
IUUC-Tur-126840	Triticum urartu	30.39	1.00e-38	154.00
IUUC-Ttr-128551	Tursiops truncatus	88.64	0.00e+00	1158.00
IUUC-Vpa-130324	Vicugna pacos	90.15	0.00e+00	1169.00
IUUC-Vvi-131699	Vitis vinifera	31.75	2.00e-39	157.00
IUUC-Xtr-131956	Xenopus tropicalis	60.67	0.00e+00	806.00
IUUC-Xma-132982	Xiphophorus maculatus	42.67	2.00e-144	506.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence