iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Oga-088622

Ensembl Protein ID

ENSOGAP00000005211.2

UniProt Accession

H0WSX4; H0WSX4_OTOGA

Genbank Protein ID

ENSOGAP00000005211

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AAQR03016756

Gene Name

NEDD1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSOGAG00000005824.2	ENSOGAT00000005827.2	ENSOGAP00000005211.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	6.80e-22	76.7	81	110

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 7    tclaf.sd.tllvsGsdDgtikvWDlrtgv 34
           tc+++ s+  +lvsG+ ++t+ +WDl+  +
   Q: 81   TCVSLnSTsMYLVSGGLNNTVNIWDLKAKR 110
           79999866699**************98665 PP

Organism

Otolemur garnettii

Protein Sequence
(Fasta)

MQENLRFASS GDDIKIWDAS SMTLLDKFNP HTSTHGVSSI CWSSNNNFLV TASSSGDKIV 60
VSSCKSKPFP LLELAEGQKQ TCVSLNSTSM YLVSGGLNNT VNIWDLKAKR VHRSLKDHQS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCAGGAAA ACCTCAGATT TGCTTCATCA GGAGATGATA TTAAAATATG GGATGCTTCA 60
TCTATGACGT TGTTGGATAA ATTCAACCCA CATACCTCAA CACATGGAGT CAGCTCAATC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0045177--C:apical part of cell
GO:0005814--C:centriole
GO:0036064--C:ciliary basal body
GO:0000242--C:pericentriolar material
GO:0000922--C:spindle pole

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000871	Aegilops tauschii	36.61	4.00e-16	80.50
IUUC-Aml-002397	Ailuropoda melanoleuca	88.82	0.00e+00	1186.00
IUUC-Atr-002464	Amborella trichopoda	31.33	7.00e-38	152.00
IUUC-Apl-003870	Anas platyrhynchos	65.49	0.00e+00	863.00
IUUC-Aca-004925	Anolis carolinensis	61.42	0.00e+00	796.00
IUUC-Aly-005931	Arabidopsis lyrata	32.14	7.00e-41	162.00
IUUC-Ath-006681	Arabidopsis thaliana	31.94	5.00e-40	159.00
IUUC-Ame-010906	Astyanax mexicanus	45.99	6.00e-155	541.00
IUUC-Bta-013389	Bos taurus	88.67	0.00e+00	1179.00
IUUC-Bdi-014340	Brachypodium distachyon	32.13	8.00e-38	152.00
IUUC-Bol-015773	Brassica oleracea	31.27	3.00e-41	163.00
IUUC-Bra-016623	Brassica rapa	31.61	1.00e-41	165.00
IUUC-Cja-019541	Callithrix jacchus	90.03	0.00e+00	1211.00
IUUC-Cfa-021218	Canis familiaris	88.07	0.00e+00	1174.00
IUUC-Cpo-021697	Cavia porcellus	82.05	0.00e+00	1103.00
IUUC-Csa-023620	Chlorocebus sabaeus	89.12	0.00e+00	1217.00
IUUC-Cho-025105	Choloepus hoffmanni	84.25	0.00e+00	923.00
IUUC-Cin-025293	Ciona intestinalis	42.47	1.00e-63	238.00
IUUC-Csv-026234	Ciona savignyi	36.64	9.00e-51	193.00
IUUC-Dre-028251	Danio rerio	44.82	1.00e-141	496.00
IUUC-Dno-029281	Dasypus novemcinctus	87.48	0.00e+00	965.00
IUUC-Dor-031020	Dipodomys ordii	74.88	7.00e-174	603.00
IUUC-Ete-033113	Echinops telfairi	83.59	0.00e+00	666.00
IUUC-Eca-034230	Equus caballus	88.99	0.00e+00	1169.00
IUUC-Eeu-034671	Erinaceus europaeus	71.79	0.00e+00	771.00
IUUC-Fca-035775	Felis catus	89.58	0.00e+00	1201.00
IUUC-Fal-037557	Ficedula albicollis	62.35	0.00e+00	788.00
IUUC-Gmo-038586	Gadus morhua	59.08	1.00e-101	363.00
IUUC-Gga-040153	Gallus gallus	64.95	0.00e+00	856.00
IUUC-Gac-041385	Gasterosteus aculeatus	42.52	4.00e-134	471.00
IUUC-Gma-042844	Glycine max	32.60	1.00e-41	164.00
IUUC-Ggo-044576	Gorilla gorilla	89.73	0.00e+00	1241.00
IUUC-Hsa-046198	Homo sapiens	89.88	0.00e+00	1242.00
IUUC-Hvu-047794	Hordeum vulgare	36.61	1.00e-16	79.30
IUUC-Lch-050561	Latimeria chalumnae	50.23	6.00e-163	567.00
IUUC-Lpe-051469	Leersia perrieri	31.05	1.00e-35	144.00
IUUC-Loc-052816	Lepisosteus oculatus	48.82	2.00e-156	546.00
IUUC-Laf-053880	Loxodonta africana	87.18	0.00e+00	1113.00
IUUC-Mcc-054977	Macaca mulatta	88.97	0.00e+00	1216.00
IUUC-Meu-056141	Macropus eugenii	62.06	2.00e-176	612.00
IUUC-Mtr-058441	Medicago truncatula	31.58	9.00e-42	165.00
IUUC-Mga-060141	Meleagris gallopavo	64.07	0.00e+00	833.00
IUUC-Mmr-061201	Microcebus murinus	91.24	0.00e+00	1242.00
IUUC-Mdo-061855	Monodelphis domestica	73.32	0.00e+00	962.00
IUUC-Mmu-064342	Mus musculus	83.99	0.00e+00	1125.00
IUUC-Mac-065368	Musa acuminata	29.35	1.00e-38	155.00
IUUC-Mpu-066191	Mustela putorius furo	88.82	0.00e+00	1187.00
IUUC-Mlu-067310	Myotis lucifugus	87.01	0.00e+00	1143.00
IUUC-Nle-069990	Nomascus leucogenys	90.18	0.00e+00	1248.00
IUUC-Opr-070336	Ochotona princeps	81.27	0.00e+00	1041.00
IUUC-Ont-071675	Oreochromis niloticus	45.96	4.00e-146	511.00
IUUC-Oan-072772	Ornithorhynchus anatinus	70.73	0.00e+00	795.00
IUUC-Ocu-074095	Oryctolagus cuniculus	88.82	0.00e+00	1194.00
IUUC-Oba-075327	Oryza barthii	30.39	6.00e-37	149.00
IUUC-Obr-076119	Oryza brachyantha	30.72	2.00e-37	150.00
IUUC-Ogl-077820	Oryza glaberrima	30.07	3.00e-36	147.00
IUUC-Ogu-078679	Oryza glumaepatula	30.39	4.00e-37	150.00
IUUC-Oin-079891	Oryza indica	30.07	4.00e-37	150.00
IUUC-Olo-080414	Oryza longistaminata	34.25	7.00e-36	145.00
IUUC-Ome-081888	Oryza meridionalis	30.72	4.00e-37	149.00
IUUC-Oni-082417	Oryza nivara	30.39	6.00e-37	149.00
IUUC-Opu-083393	Oryza punctata	30.07	6.00e-37	149.00
IUUC-Oru-084698	Oryza rufipogon	30.39	4.00e-37	150.00
IUUC-Osa-086121	Oryza sativa	30.39	6.00e-37	149.00
IUUC-Ola-086806	Oryzias latipes	41.00	2.00e-139	489.00
IUUC-Olu-087591	Ostreococcus lucimarinus	23.90	4.00e-14	72.40
IUUC-Oar-090391	Ovis aries	86.04	0.00e+00	1012.00
IUUC-Ptr-091036	Pan troglodytes	89.73	0.00e+00	1241.00
IUUC-Pan-092576	Papio anubis	89.27	0.00e+00	1219.00
IUUC-Psi-093450	Pelodiscus sinensis	68.50	0.00e+00	885.00
IUUC-Pma-094101	Petromyzon marinus	54.34	6.00e-104	370.00
IUUC-Ppa-095636	Physcomitrella patens	31.82	2.00e-41	164.00
IUUC-Pfo-097142	Poecilia formosa	59.33	2.00e-108	386.00
IUUC-Pab-097829	Pongo abelii	89.88	0.00e+00	1241.00
IUUC-Pop-099687	Populus trichocarpa	31.73	3.00e-41	163.00
IUUC-Pca-100217	Procavia capensis	82.17	0.00e+00	686.00
IUUC-Ppe-101502	Prunus persica	32.69	6.00e-41	162.00
IUUC-Pva-102736	Pteropus vampyrus	86.86	0.00e+00	1166.00
IUUC-Rno-104977	Rattus norvegicus	84.29	0.00e+00	1081.00
IUUC-Sha-107003	Sarcophilus harrisii	73.47	0.00e+00	968.00
IUUC-Smo-109216	Selaginella moellendorffii	34.08	2.00e-39	156.00
IUUC-Sit-109796	Setaria italica	29.87	8.00e-37	149.00
IUUC-Sly-110941	Solanum lycopersicum	29.97	4.00e-38	152.00
IUUC-Stu-112314	Solanum tuberosum	30.28	5.00e-38	152.00
IUUC-Sar-112926	Sorex araneus	81.42	0.00e+00	1085.00
IUUC-Sbi-113822	Sorghum bicolor	33.71	2.00e-27	117.00
IUUC-Ssc-116242	Sus scrofa	87.94	0.00e+00	647.00
IUUC-Tgu-116765	Taeniopygia guttata	63.70	0.00e+00	813.00
IUUC-Tru-117738	Takifugu rubripes	43.23	6.00e-151	527.00
IUUC-Tsy-118856	Tarsius syrichta	85.25	0.00e+00	1073.00
IUUC-Tni-120871	Tetraodon nigroviridis	44.65	2.00e-151	529.00
IUUC-Tca-120965	Theobroma cacao	31.16	1.00e-40	161.00
IUUC-Tae-124830	Triticum aestivum	30.22	7.00e-39	155.00
IUUC-Tur-126840	Triticum urartu	30.07	2.00e-38	154.00
IUUC-Ttr-128551	Tursiops truncatus	86.86	0.00e+00	1149.00
IUUC-Vpa-130324	Vicugna pacos	88.97	0.00e+00	1164.00
IUUC-Vvi-131699	Vitis vinifera	30.29	5.00e-39	156.00
IUUC-Xtr-131956	Xenopus tropicalis	59.88	0.00e+00	798.00
IUUC-Xma-132982	Xiphophorus maculatus	58.33	6.00e-108	384.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence