iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114871

UUCD1 version

UUC-SoB-00793

Ensembl Protein ID

Sb04g008310.1

UniProt Accession

C5XYK4; C5XYK4_SORBI

Genbank Protein ID

EES06547.1; KXG29865.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000763; CM000763

Gene Name

SORBI_004G101500

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb04g008310	Sb04g008310.1	Sb04g008310.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	26.26	5.00e-14	76.30	IUUC-Hsa-046298
E3 activity/RING/RING	24.81	4.00e-13	72.80	IUUC-Mmu-063104

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MKCNACWREL EGQAISTTCG HLLCADDAKK ILSNDGACPI CDQVLSKSHM KPMDINPSDD 60
WTNMAMVGIS PQILMKSAYR SVMFYIGQKE LEMQYKMNRI VGQCRQKCEL MQAKFTEKLE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCGGCGCGTC CTTGCTTTCT GGTGGCGTCG ACTGGGCGGC CGCCGCCGCC GCCCACCACC 60
ACCACCTCCC TGGTGTCCAG GTCTTCGTCG ATCCCTTCGT GTCTGTACCT TAGCCTGGTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

Pfam

PF14634--zf-RING_5

Gene Ontology

GO:0005694--C:chromosome
GO:0008270--F:zinc ion binding
GO:0051026--P:chiasma assembly
GO:0007131--P:reciprocal meiotic recombination

KEGG

sbi:SORBI_04g008310

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001494	Ailuropoda melanoleuca	25.13	5.00e-15	73.90
IUUC-Atr-002590	Amborella trichopoda	65.09	2.00e-118	417.00
IUUC-Aca-004727	Anolis carolinensis	27.37	3.00e-16	78.20
IUUC-Aly-005623	Arabidopsis lyrata	66.67	2.00e-116	410.00
IUUC-Ath-007676	Arabidopsis thaliana	67.74	1.00e-118	418.00
IUUC-Acl-008069	Aspergillus clavatus	24.14	2.00e-12	66.20
IUUC-Ang-009632	Aspergillus niger	22.45	4.00e-09	54.70
IUUC-Ame-011272	Astyanax mexicanus	25.13	8.00e-10	55.80
IUUC-Bgr-012009	Blumeria graminis	21.71	8.00e-08	50.10
IUUC-Bta-013554	Bos taurus	26.26	7.00e-16	76.60
IUUC-Bci-013777	Botrytis cinerea	22.85	1.00e-16	79.70
IUUC-Bdi-014526	Brachypodium distachyon	80.26	8.00e-147	511.00
IUUC-Bol-015609	Brassica oleracea	52.42	3.00e-93	334.00
IUUC-Bra-017490	Brassica rapa	54.06	1.00e-102	365.00
IUUC-Cja-019479	Callithrix jacchus	26.26	2.00e-15	75.50
IUUC-Cfa-020587	Canis familiaris	26.15	8.00e-16	77.00
IUUC-Cpo-022322	Cavia porcellus	26.26	1.00e-15	75.90
IUUC-Csa-023413	Chlorocebus sabaeus	26.26	2.00e-15	75.50
IUUC-Cho-024774	Choloepus hoffmanni	26.26	3.00e-15	74.70
IUUC-Cin-025768	Ciona intestinalis	24.58	2.00e-13	68.60
IUUC-Csv-025979	Ciona savignyi	31.40	2.00e-12	64.30
IUUC-Dre-027844	Danio rerio	25.70	3.00e-14	71.20
IUUC-Dno-029464	Dasypus novemcinctus	26.15	8.00e-16	76.60
IUUC-Ete-032388	Echinops telfairi	30.43	2.00e-07	48.50
IUUC-Eca-034091	Equus caballus	26.26	2.00e-15	75.50
IUUC-Eeu-034849	Erinaceus europaeus	29.35	5.00e-07	47.00
IUUC-Fca-036196	Felis catus	26.26	8.00e-16	76.60
IUUC-Fox-038053	Fusarium oxysporum	24.52	2.00e-15	75.10
IUUC-Fso-038281	Fusarium solani	24.02	3.00e-14	72.00
IUUC-Gmo-038640	Gadus morhua	24.04	1.00e-11	62.40
IUUC-Gac-042089	Gasterosteus aculeatus	26.26	1.00e-14	72.00
IUUC-Gma-043411	Glycine max	66.99	7.00e-113	399.00
IUUC-Ggo-044908	Gorilla gorilla	26.26	2.00e-15	75.10
IUUC-Hsa-046298	Homo sapiens	26.26	2.00e-15	75.50
IUUC-Hvu-047386	Hordeum vulgare	87.56	2.00e-111	393.00
IUUC-Itr-048597	Ictidomys tridecemlineatus	26.00	9.00e-09	53.10
IUUC-Lch-049554	Latimeria chalumnae	26.26	3.00e-12	64.30
IUUC-Lpe-051573	Leersia perrieri	82.18	4.00e-151	526.00
IUUC-Lma-052964	Leptosphaeria maculans	25.00	1.00e-08	54.70
IUUC-Laf-053637	Loxodonta africana	25.70	7.00e-15	73.60
IUUC-Mcc-055204	Macaca mulatta	26.26	2.00e-15	75.50
IUUC-Meu-055940	Macropus eugenii	23.62	1.00e-08	51.60
IUUC-Mpo-057618	Magnaporthe poae	20.53	2.00e-07	49.30
IUUC-Mtr-058578	Medicago truncatula	66.78	2.00e-113	400.00
IUUC-Mla-058981	Melampsora laricipopulina	23.04	1.00e-11	63.50
IUUC-Mvi-060402	Microbotryum violaceum	30.69	1.00e-11	63.20
IUUC-Mmr-061554	Microcebus murinus	26.26	2.00e-15	75.10
IUUC-Mdo-062669	Monodelphis domestica	25.70	2.00e-15	75.50
IUUC-Mmu-063104	Mus musculus	24.81	1.00e-14	72.80
IUUC-Mac-064883	Musa acuminata	66.78	7.00e-117	412.00
IUUC-Mpu-066581	Mustela putorius furo	26.15	1.00e-15	75.90
IUUC-Mlu-067434	Myotis lucifugus	26.82	5.00e-16	77.00
IUUC-Nfi-068592	Neosartorya fischeri	22.91	2.00e-05	42.00
IUUC-Ncr-068708	Neurospora crassa	26.18	3.00e-18	85.10
IUUC-Nle-070183	Nomascus leucogenys	26.26	2.00e-15	75.50
IUUC-Opr-070894	Ochotona princeps	26.26	2.00e-15	75.50
IUUC-Oan-072769	Ornithorhynchus anatinus	25.70	1.00e-15	75.90
IUUC-Ocu-073947	Oryctolagus cuniculus	26.26	8.00e-16	76.60
IUUC-Oba-075070	Oryza barthii	83.50	1.00e-155	541.00
IUUC-Obr-076808	Oryza brachyantha	82.24	8.00e-149	518.00
IUUC-Ogl-077330	Oryza glaberrima	83.50	3.00e-155	540.00
IUUC-Ogu-078072	Oryza glumaepatula	79.39	3.00e-140	490.00
IUUC-Oin-079403	Oryza indica	83.17	4.00e-155	540.00
IUUC-Ome-081922	Oryza meridionalis	77.23	5.00e-136	476.00
IUUC-Oni-082103	Oryza nivara	82.53	1.00e-111	394.00
IUUC-Opu-083915	Oryza punctata	76.36	2.00e-139	487.00
IUUC-Oru-085264	Oryza rufipogon	80.43	7.00e-110	388.00
IUUC-Osa-086002	Oryza sativa	83.17	8.00e-155	538.00
IUUC-Ola-087405	Oryzias latipes	25.70	1.00e-13	68.60
IUUC-Oga-088542	Otolemur garnettii	26.26	2.00e-15	75.50
IUUC-Oar-089270	Ovis aries	26.26	7.00e-16	76.60
IUUC-Ptr-090658	Pan troglodytes	26.26	2.00e-15	75.50
IUUC-Pan-092852	Papio anubis	25.97	3.00e-15	74.30
IUUC-Psi-093949	Pelodiscus sinensis	27.92	2.00e-17	82.00
IUUC-Pma-094220	Petromyzon marinus	19.08	2.00e-09	54.30
IUUC-Ppa-095443	Physcomitrella patens	39.32	4.00e-53	200.00
IUUC-Pfo-096277	Poecilia formosa	25.70	1.00e-12	65.50
IUUC-Pab-098550	Pongo abelii	26.26	1.00e-15	75.90
IUUC-Pop-099903	Populus trichocarpa	70.00	2.00e-106	377.00
IUUC-Pca-100150	Procavia capensis	26.26	1.00e-15	76.30
IUUC-Ppe-101240	Prunus persica	67.65	2.00e-121	427.00
IUUC-Pva-102742	Pteropus vampyrus	26.82	5.00e-16	77.00
IUUC-Pte-104396	Pyrenophora teres	22.45	2.00e-07	50.10
IUUC-Rno-105452	Rattus norvegicus	26.27	6.00e-16	77.40
IUUC-Sha-107359	Sarcophilus harrisii	25.14	5.00e-15	73.90
IUUC-Ssl-108502	Sclerotinia sclerotiorum	20.69	3.00e-09	55.10
IUUC-Sit-110136	Setaria italica	77.63	4.00e-132	462.00
IUUC-Sly-111297	Solanum lycopersicum	63.67	1.00e-103	368.00
IUUC-Stu-112496	Solanum tuberosum	60.52	4.00e-76	276.00
IUUC-Sar-113186	Sorex araneus	26.15	7.00e-16	76.60
IUUC-Ssc-116149	Sus scrofa	26.26	2.00e-15	75.50
IUUC-Tsy-119353	Tarsius syrichta	29.35	2.00e-07	48.90
IUUC-Tni-120854	Tetraodon nigroviridis	26.82	2.00e-13	68.20
IUUC-Tca-121749	Theobroma cacao	69.38	8.00e-125	438.00
IUUC-Tvi-122257	Trichoderma virens	19.23	2.00e-07	48.10
IUUC-Tae-125852	Triticum aestivum	80.59	4.00e-139	486.00
IUUC-Tme-126923	Tuber melanosporum	25.00	8.00e-13	67.00
IUUC-Tbe-127608	Tupaia belangeri	26.26	2.00e-15	75.10
IUUC-Ttr-128671	Tursiops truncatus	25.70	4.00e-15	74.30
IUUC-Vda-129697	Verticillium dahliae	24.32	2.00e-13	68.90
IUUC-Vpa-130711	Vicugna pacos	24.14	5.00e-03	33.10
IUUC-Vvi-131396	Vitis vinifera	64.46	1.00e-85	308.00
IUUC-Xtr-132491	Xenopus tropicalis	26.26	7.00e-15	73.20
IUUC-Xma-133340	Xiphophorus maculatus	25.14	9.00e-13	65.90
IUUC-Zma-134799	Zea mays	92.41	3.00e-172	596.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence