iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
Protein-protein Interaction
iRefIndex	PINA	HINT	Mentha
Post-translational Modifications (PTMs)
dbPPT
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UDP/UBQ/UBQ_Other	2.50e-08	34.6	9	77

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UBQ/UBQ_Other

   S: 7    sldgseltlkvnpsdtVaeLKekiekklgippeqqrLiyk..GkiLeddktLadyglkdgstihllekks 74
            ++ + + ++++p++tV+++K+k++ +   p++ qrL++    ++Led k+Lad ++ ++ ++ l++kk 
   Q: 9    RMKTT-YFIQCDPTETVLDVKQKLFALIEQPVNNQRLVLMstEEVLEDSKSLADQKVENDAVVALTLKKD 77
           55543.335578***************999********55457789*****************9998875 PP

Organism

Arabidopsis thaliana

Protein Sequence
(Fasta)

MAMYIRVKRM KTTYFIQCDP TETVLDVKQK LFALIEQPVN NQRLVLMSTE EVLEDSKSLA 60
DQKVENDAVV ALTLKKDDNE FEDVNIAQPT DFSLS 95

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TGGGTTTTGT ACGACGCCTA ATCGATGTTA GTATTATATC TGTAGCCAAA CAAGCCACCA 60
AAGTGGTATT TTTCTTCTTC CTTCCTTACC TTGTAGGGCT CTGAGCTCGA GTTATAAAAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR029071--Ubiquitin-rel_dom
IPR000626--Ubiquitin_dom

PROSITE

PS50053--UBIQUITIN_2

Pfam

PF00240--ubiquitin

SMART

SM00213--UBQ

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000067	Aegilops tauschii	70.67	2.00e-26	113.00
IUUC-Aml-001280	Ailuropoda melanoleuca	25.81	6.00e-06	42.00
IUUC-Atr-002796	Amborella trichopoda	65.26	2.00e-35	139.00
IUUC-Aca-004530	Anolis carolinensis	24.18	2.00e-04	37.00
IUUC-Aly-005974	Arabidopsis lyrata	94.74	3.00e-49	184.00
IUUC-Ame-010804	Astyanax mexicanus	30.11	7.00e-08	48.50
IUUC-Bta-013207	Bos taurus	29.35	6.00e-06	42.00
IUUC-Bdi-014917	Brachypodium distachyon	67.37	2.00e-34	135.00
IUUC-Bol-015146	Brassica oleracea	86.32	4.00e-45	171.00
IUUC-Bra-016620	Brassica rapa	86.02	5.00e-44	167.00
IUUC-Cja-018927	Callithrix jacchus	27.96	2.00e-05	40.00
IUUC-Cpo-022344	Cavia porcellus	26.37	3.00e-05	39.70
IUUC-Cre-022721	Chlamydomonas reinhardtii	53.49	1.00e-20	90.50
IUUC-Csa-024213	Chlorocebus sabaeus	26.37	5.00e-05	38.90
IUUC-Csv-026001	Ciona savignyi	29.41	1.00e-06	43.90
IUUC-Dre-027429	Danio rerio	29.03	1.00e-05	40.80
IUUC-Dno-029254	Dasypus novemcinctus	26.37	4.00e-05	39.30
IUUC-Fca-036342	Felis catus	26.37	4.00e-05	39.30
IUUC-Gmo-039651	Gadus morhua	27.47	4.00e-05	38.90
IUUC-Gac-041732	Gasterosteus aculeatus	26.88	4.00e-05	39.30
IUUC-Gma-043862	Glycine max	73.91	1.00e-36	143.00
IUUC-Ggo-044725	Gorilla gorilla	26.37	7.00e-05	39.30
IUUC-Hsa-046790	Homo sapiens	26.88	2.00e-05	40.00
IUUC-Hvu-047856	Hordeum vulgare	68.85	1.00e-22	96.70
IUUC-Lpe-051645	Leersia perrieri	72.53	1.00e-35	139.00
IUUC-Laf-054303	Loxodonta africana	27.47	1.00e-05	40.80
IUUC-Mcc-055397	Macaca mulatta	29.03	3.00e-06	42.70
IUUC-Mtr-058736	Medicago truncatula	63.04	4.00e-32	128.00
IUUC-Mmr-061528	Microcebus murinus	26.37	3.00e-05	39.70
IUUC-Mdo-062545	Monodelphis domestica	27.47	3.00e-05	40.00
IUUC-Mmu-064363	Mus musculus	26.88	2.00e-05	40.40
IUUC-Mpu-066915	Mustela putorius furo	25.27	1.00e-04	37.40
IUUC-Nle-069826	Nomascus leucogenys	27.59	2.00e-04	37.70
IUUC-Ont-071245	Oreochromis niloticus	29.67	4.00e-07	45.80
IUUC-Ocu-074024	Oryctolagus cuniculus	27.59	1.00e-04	37.70
IUUC-Obr-076724	Oryza brachyantha	74.73	2.00e-36	142.00
IUUC-Oin-080167	Oryza indica	73.63	2.00e-35	139.00
IUUC-Opu-084014	Oryza punctata	75.82	2.00e-36	142.00
IUUC-Osa-085650	Oryza sativa	73.63	2.00e-35	139.00
IUUC-Ola-086438	Oryzias latipes	27.47	6.00e-06	42.70
IUUC-Oar-090425	Ovis aries	25.27	1.00e-04	37.40
IUUC-Ptr-090487	Pan troglodytes	26.88	3.00e-05	40.40
IUUC-Pan-092779	Papio anubis	26.88	3.00e-05	40.40
IUUC-Ppa-095566	Physcomitrella patens	60.64	3.00e-29	119.00
IUUC-Pfo-097197	Poecilia formosa	30.11	5.00e-07	45.40
IUUC-Pab-098035	Pongo abelii	26.88	3.00e-05	40.40
IUUC-Pop-099504	Populus trichocarpa	77.42	4.00e-38	148.00
IUUC-Ppe-101148	Prunus persica	78.95	1.00e-39	153.00
IUUC-Rno-105760	Rattus norvegicus	28.74	3.00e-06	42.70
IUUC-Sha-107566	Sarcophilus harrisii	27.96	1.00e-05	40.80
IUUC-Smo-109472	Selaginella moellendorffii	68.49	9.00e-26	107.00
IUUC-Sit-110780	Setaria italica	70.83	7.00e-27	110.00
IUUC-Sly-111382	Solanum lycopersicum	79.12	1.00e-37	146.00
IUUC-Stu-112245	Solanum tuberosum	75.95	2.00e-30	122.00
IUUC-Sar-113663	Sorex araneus	25.88	1.00e-03	33.50
IUUC-Sbi-114447	Sorghum bicolor	70.00	9.00e-34	133.00
IUUC-Ssc-115270	Sus scrofa	25.81	5.00e-05	38.90
IUUC-Tru-117747	Takifugu rubripes	28.57	7.00e-06	41.60
IUUC-Tni-120611	Tetraodon nigroviridis	29.89	2.00e-05	40.00
IUUC-Tca-121839	Theobroma cacao	81.05	3.00e-42	162.00
IUUC-Tae-123175	Triticum aestivum	68.09	9.00e-35	138.00
IUUC-Tur-126569	Triticum urartu	69.74	5.00e-29	119.00
IUUC-Ttr-128410	Tursiops truncatus	25.81	7.00e-05	39.30
IUUC-Vvi-130839	Vitis vinifera	79.12	1.00e-40	157.00
IUUC-Xtr-132615	Xenopus tropicalis	23.08	1.00e-04	37.40
IUUC-Xma-133408	Xiphophorus maculatus	28.57	2.00e-05	40.80

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence