iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017266

Ensembl Protein ID

Bra019958.1-P

UniProt Accession

M4DTW5; M4DTW5_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra019958	Bra019958.1	Bra019958.1-P

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	35.52	5.00e-133	473.00	IUUC-Hsa-046870

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Brassica rapa

Protein Sequence
(Fasta)

MFGSYQFLQS EYIFLIWLYR STLVTTCEGS GSVFVESEKN MSSQVRRDRR HQSSQQTWVP 60
RGASTSVAVV NEPSHPPANN TAGVSESLVA GAASRPVYPQ RQHNGSVRPP YNQHQRNNNV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTTTGGAA GTTACCAATT TCTACAATCT GAATATATAT TTCTCATTTG GTTGTATAGA 60
AGCACTTTAG TGACGACGTG TGAAGGATCT GGTTCTGTAT TTGTGGAGTC AGAGAAGAAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR034078--NFX1_fam
IPR001374--R3H_dom
IPR019786--Zinc_finger_PHD-type_CS
IPR000967--Znf_NFX1
IPR019787--Znf_PHD-finger
IPR001841--Znf_RING

PROSITE

PS01359--ZF_PHD_1
PS50016--ZF_PHD_2
PS50089--ZF_RING_2

Pfam

PF01424--R3H
PF01422--zf-NF-X1

SMART

SM00438--ZnF_NFX

Gene Ontology

GO:0005634--C:nucleus
GO:0003676--F:nucleic acid binding
GO:0003700--F:transcription factor activity, sequence-specific DNA binding
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000224	Aegilops tauschii	59.59	0.00e+00	847.00
IUUC-Aml-001716	Ailuropoda melanoleuca	35.42	2.00e-125	443.00
IUUC-Atr-002895	Amborella trichopoda	57.45	0.00e+00	1175.00
IUUC-Apl-003650	Anas platyrhynchos	37.18	8.00e-128	451.00
IUUC-Aca-004313	Anolis carolinensis	36.07	2.00e-136	480.00
IUUC-Aly-006515	Arabidopsis lyrata	83.60	0.00e+00	1865.00
IUUC-Ath-007056	Arabidopsis thaliana	79.93	0.00e+00	1853.00
IUUC-Ago-007777	Ashbya gossypii	31.07	3.00e-87	316.00
IUUC-Acl-008068	Aspergillus clavatus	35.23	2.00e-79	290.00
IUUC-Afl-008499	Aspergillus flavus	33.61	3.00e-39	155.00
IUUC-Afu-009016	Aspergillus fumigatus	32.83	2.00e-109	390.00
IUUC-Ani-009477	Aspergillus nidulans	33.01	9.00e-110	391.00
IUUC-Ang-009605	Aspergillus niger	34.49	9.00e-114	404.00
IUUC-Aor-010166	Aspergillus oryzae	33.49	2.00e-46	180.00
IUUC-Ame-010640	Astyanax mexicanus	38.37	1.00e-130	460.00
IUUC-Bgr-012024	Blumeria graminis	29.73	4.00e-105	376.00
IUUC-Bta-012789	Bos taurus	37.61	1.00e-122	434.00
IUUC-Bci-013768	Botrytis cinerea	30.18	4.00e-108	385.00
IUUC-Bdi-014723	Brachypodium distachyon	57.73	0.00e+00	1147.00
IUUC-Bol-015394	Brassica oleracea	95.89	0.00e+00	2171.00
IUUC-Cel-018668	Caenorhabditis elegans	33.25	3.00e-118	419.00
IUUC-Cja-019769	Callithrix jacchus	34.26	1.00e-113	404.00
IUUC-Cfa-020727	Canis familiaris	35.62	4.00e-126	446.00
IUUC-Cpo-021741	Cavia porcellus	36.80	2.00e-131	463.00
IUUC-Csa-024054	Chlorocebus sabaeus	35.93	1.00e-126	447.00
IUUC-Cho-025031	Choloepus hoffmanni	35.62	3.00e-102	366.00
IUUC-Cin-025164	Ciona intestinalis	35.31	3.00e-119	422.00
IUUC-Csv-026260	Ciona savignyi	35.44	3.00e-126	446.00
IUUC-Cgl-026451	Colletotrichum gloeosporioides	33.23	1.00e-72	267.00
IUUC-Cne-026923	Cryptococcus neoformans	29.15	2.00e-68	254.00
IUUC-Dre-028227	Danio rerio	39.14	3.00e-141	496.00
IUUC-Dno-029830	Dasypus novemcinctus	34.20	7.00e-116	411.00
IUUC-Dor-030436	Dipodomys ordii	32.34	5.00e-86	312.00
IUUC-Dse-031485	Dothistroma septosporum	34.83	5.00e-114	405.00
IUUC-Dme-031875	Drosophila melanogaster	35.39	4.00e-110	392.00
IUUC-Eca-033415	Equus caballus	36.30	2.00e-52	199.00
IUUC-Eeu-034528	Erinaceus europaeus	35.02	4.00e-78	286.00
IUUC-Fca-036238	Felis catus	37.55	4.00e-118	418.00
IUUC-Fal-037124	Ficedula albicollis	37.02	7.00e-137	481.00
IUUC-Fox-038075	Fusarium oxysporum	30.30	4.00e-08	53.50
IUUC-Fso-038310	Fusarium solani	32.95	7.00e-102	365.00
IUUC-Gmo-039506	Gadus morhua	37.34	5.00e-122	431.00
IUUC-Ggr-039984	Gaeumannomyces graminis	34.50	1.00e-114	407.00
IUUC-Gga-040674	Gallus gallus	37.16	2.00e-125	442.00
IUUC-Gac-041416	Gasterosteus aculeatus	37.55	2.00e-125	442.00
IUUC-Gma-043625	Glycine max	62.11	0.00e+00	1256.00
IUUC-Ggo-045017	Gorilla gorilla	35.46	4.00e-125	442.00
IUUC-Hsa-046870	Homo sapiens	35.72	7.00e-127	448.00
IUUC-Hvu-047466	Hordeum vulgare	56.79	0.00e+00	816.00
IUUC-Itr-048703	Ictidomys tridecemlineatus	43.90	4.00e-15	75.50
IUUC-Kpa-049244	Komagataella pastoris	29.99	3.00e-70	259.00
IUUC-Lch-050376	Latimeria chalumnae	38.70	3.00e-132	466.00
IUUC-Lpe-050955	Leersia perrieri	55.66	0.00e+00	1015.00
IUUC-Loc-051948	Lepisosteus oculatus	38.84	1.00e-139	490.00
IUUC-Lma-052950	Leptosphaeria maculans	32.46	3.00e-103	370.00
IUUC-Laf-054206	Loxodonta africana	35.48	1.00e-69	257.00
IUUC-Mcc-055005	Macaca mulatta	35.74	5.00e-126	445.00
IUUC-Meu-056120	Macropus eugenii	39.30	5.00e-58	219.00
IUUC-Mor-057238	Magnaporthe oryzae	34.98	5.00e-122	432.00
IUUC-Mpo-057574	Magnaporthe poae	34.42	2.00e-114	407.00
IUUC-Mtr-057823	Medicago truncatula	59.98	0.00e+00	1110.00
IUUC-Mla-058822	Melampsora laricipopulina	31.22	1.00e-84	307.00
IUUC-Mga-059785	Meleagris gallopavo	41.88	3.00e-74	272.00
IUUC-Mvi-060543	Microbotryum violaceum	29.93	6.00e-90	325.00
IUUC-Mmr-060611	Microcebus murinus	35.35	1.00e-116	414.00
IUUC-Mdo-062719	Monodelphis domestica	36.10	8.00e-133	468.00
IUUC-Mmu-064376	Mus musculus	37.01	3.00e-123	436.00
IUUC-Mac-064834	Musa acuminata	57.20	0.00e+00	1048.00
IUUC-Mpu-066298	Mustela putorius furo	35.75	4.00e-125	442.00
IUUC-Mlu-067546	Myotis lucifugus	37.16	4.00e-124	439.00
IUUC-Nfi-068388	Neosartorya fischeri	32.95	5.00e-116	412.00
IUUC-Ncr-068875	Neurospora crassa	33.37	3.00e-108	386.00
IUUC-Nle-069813	Nomascus leucogenys	35.40	6.00e-126	445.00
IUUC-Opr-070995	Ochotona princeps	36.98	2.00e-123	436.00
IUUC-Ont-072084	Oreochromis niloticus	38.63	5.00e-129	455.00
IUUC-Oan-073545	Ornithorhynchus anatinus	33.12	2.00e-121	429.00
IUUC-Ocu-074092	Oryctolagus cuniculus	33.30	1.00e-119	424.00
IUUC-Oba-075828	Oryza barthii	57.56	0.00e+00	1089.00
IUUC-Obr-076373	Oryza brachyantha	59.92	0.00e+00	866.00
IUUC-Ogl-077043	Oryza glaberrima	59.45	0.00e+00	1127.00
IUUC-Ogu-078647	Oryza glumaepatula	59.51	0.00e+00	1112.00
IUUC-Oin-079793	Oryza indica	59.84	0.00e+00	893.00
IUUC-Olo-080815	Oryza longistaminata	60.45	0.00e+00	1093.00
IUUC-Ome-081650	Oryza meridionalis	59.62	0.00e+00	1157.00
IUUC-Oni-082708	Oryza nivara	59.72	0.00e+00	1154.00
IUUC-Opu-084078	Oryza punctata	59.61	0.00e+00	1108.00
IUUC-Oru-084549	Oryza rufipogon	59.82	0.00e+00	1156.00
IUUC-Osa-086095	Oryza sativa	60.49	0.00e+00	1021.00
IUUC-Olu-087617	Ostreococcus lucimarinus	25.49	1.00e-02	35.00
IUUC-Oga-088453	Otolemur garnettii	35.52	9.00e-123	434.00
IUUC-Oar-089769	Ovis aries	37.34	6.00e-124	438.00
IUUC-Ptr-090803	Pan troglodytes	35.72	7.00e-127	448.00
IUUC-Pan-092169	Papio anubis	35.74	1.00e-128	454.00
IUUC-Psi-094065	Pelodiscus sinensis	36.82	2.00e-136	480.00
IUUC-Pma-094592	Petromyzon marinus	36.61	3.00e-121	429.00
IUUC-Pno-095016	Phaeosphaeria nodorum	30.82	2.00e-17	82.80
IUUC-Ppa-095597	Physcomitrella patens	50.56	0.00e+00	914.00
IUUC-Pfo-096959	Poecilia formosa	38.35	3.00e-129	456.00
IUUC-Pab-097732	Pongo abelii	38.21	4.00e-101	362.00
IUUC-Pop-099062	Populus trichocarpa	70.46	0.00e+00	1357.00
IUUC-Pca-100219	Procavia capensis	30.60	6.00e-67	249.00
IUUC-Ppe-101695	Prunus persica	65.01	0.00e+00	1363.00
IUUC-Pva-102402	Pteropus vampyrus	36.36	2.00e-96	347.00
IUUC-Pgr-103317	Puccinia graminis	28.32	7.00e-83	302.00
IUUC-Ptt-103771	Puccinia triticina	29.97	2.00e-89	324.00
IUUC-Pte-104189	Pyrenophora teres	26.02	1.00e-06	47.80
IUUC-Pyt-104801	Pyrenophora triticirepentis	33.04	3.00e-109	389.00
IUUC-Rno-105721	Rattus norvegicus	36.78	3.00e-129	456.00
IUUC-Sce-106350	Saccharomyces cerevisiae	30.57	2.00e-76	280.00
IUUC-Sha-106801	Sarcophilus harrisii	36.06	2.00e-135	476.00
IUUC-Sja-107692	Schizosaccharomyces japonicus	31.33	7.00e-100	358.00
IUUC-Spo-108253	Schizosaccharomyces pombe	30.53	4.00e-105	376.00
IUUC-Ssl-108587	Sclerotinia sclerotiorum	36.18	2.00e-74	273.00
IUUC-Smo-108865	Selaginella moellendorffii	51.74	0.00e+00	817.00
IUUC-Sit-110153	Setaria italica	60.02	0.00e+00	1142.00
IUUC-Sly-111638	Solanum lycopersicum	64.77	0.00e+00	1288.00
IUUC-Stu-112099	Solanum tuberosum	65.38	0.00e+00	1302.00
IUUC-Sar-113030	Sorex araneus	33.03	1.00e-40	161.00
IUUC-Sbi-113944	Sorghum bicolor	59.20	0.00e+00	1157.00
IUUC-Sre-115206	Sporisorium reilianum	30.92	8.00e-103	368.00
IUUC-Ssc-115729	Sus scrofa	44.05	6.00e-16	78.60
IUUC-Tgu-117520	Taeniopygia guttata	33.75	3.00e-104	372.00
IUUC-Tru-118487	Takifugu rubripes	38.01	3.00e-123	435.00
IUUC-Tsy-119363	Tarsius syrichta	31.66	1.00e-90	327.00
IUUC-Tca-121813	Theobroma cacao	67.69	0.00e+00	1379.00
IUUC-Tre-122248	Trichoderma reesei	33.50	5.00e-102	365.00
IUUC-Tvi-122462	Trichoderma virens	34.39	1.00e-110	394.00
IUUC-Tae-123637	Triticum aestivum	56.85	0.00e+00	1087.00
IUUC-Tur-126173	Triticum urartu	57.94	0.00e+00	1031.00
IUUC-Tme-127213	Tuber melanosporum	30.76	2.00e-92	334.00
IUUC-Tbe-127399	Tupaia belangeri	38.96	9.00e-77	281.00
IUUC-Ttr-128798	Tursiops truncatus	34.49	1.00e-69	258.00
IUUC-Uma-129421	Ustilago maydis	32.35	1.00e-101	364.00
IUUC-Vda-129863	Verticillium dahliae	31.34	1.00e-100	361.00
IUUC-Vvi-131615	Vitis vinifera	63.96	0.00e+00	1409.00
IUUC-Xtr-132309	Xenopus tropicalis	38.16	2.00e-126	446.00
IUUC-Xma-133235	Xiphophorus maculatus	37.58	2.00e-124	440.00
IUUC-Yli-134536	Yarrowia lipolytica	30.92	2.00e-87	316.00
IUUC-Zma-135358	Zea mays	57.83	0.00e+00	1076.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence