iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-121609

Ensembl Protein ID

EOY21233

UniProt Accession

A0A061FVZ2; A0A061FVZ2_THECC

Genbank Protein ID

EOY21233.1

Protein Name

Transducin family protein / WD-40 repeat family protein isoform 1

Genbank Nucleotide ID

CM001881

Gene Name

TCM_012627

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_012627	EOY21233	EOY21233
TCM_012627	EOY21234	EOY21234

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.40e-32	111.2	232	262
UBD/Beta-Prp	4.80e-61	207.5	53	276

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDl 30
           H++s++++++ +d t +++ s D+t kvW++
   Q: 232  HKGSIYAVSWsPDgTQVLTVSADKTAKVWEI 262
           9**********999***************96 PP

UBD/Beta-Prp

   S: 6    kghhksvitcvkfspdksllatgsrdgtikvwdvttgkllrsl.sgheaevtavkfspdgkilvtgseD....rtikvwdlstgkcvhtlkghedsvlsls 101
            g+h  + t+  fsp+++++a++  +gt+++w +++  +l++  +  ++ + ++++spdg +++ +s D     +++ +  ++g+ v  + gh+++vls+s
   Q: 53   YGEHAYPATVARFSPNGEWIASADVSGTVRIWGTHNDHVLKKEfKVLSGRIDDLQWSPDG-MRIVASGDgkgkSLVRAFMWDSGTNVGEFDGHSRRVLSCS 152
           57788899***************************999877665***************9.7888888879999*************************** PP
   S: 102  fspsg.dklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtl..tgghtdsvyslsfdsngkelvsgs 199
           f p++  ++v+ ++d  ++ ++ +         + h+ +vncv+++pdg  +++ s D++  ++d k+g+ + +l  + +h++s+y +s++++g++++++s
   Q: 153  FKPTRpFRIVTCGEDFLVNFYEGPPFRFKL-SHRDHSNFVNCVRFSPDGTKFITVSSDKKGIIFDGKSGEKIGELssEDAHKGSIYAVSWSPDGTQVLTVS 252
           ***99899***************9999999.9*******************************************99778********************* PP
   S: 200  ldgtvklwdlq...tgecvrtlng 220
            d+t k+w+++   +g+  ++l++
   Q: 253  ADKTAKVWEISedgNGKLKKKLTC 276
           **********98887776666655 PP

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MPELAETYAC VPSTERGRGI LISGDPKSNR VLYTNGRSVI ILDLNNPLNV AIYGEHAYPA 60
TVARFSPNGE WIASADVSGT VRIWGTHNDH VLKKEFKVLS GRIDDLQWSP DGMRIVASGD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CACTCTTCCC CTGCCTCTGA TCCCCAAACC CCACACTCTC TACTTTCCCT TTCACCACAA 60
TCCCTTCTCA GCTCCCCCAT TTCCTTTTCC CAATCAAATT ATCAAATAAA AAGTTAGAAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR003143--Cyt_cd1_C
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005829--C:cytosol

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000457	Aegilops tauschii	67.95	0.00e+00	763.00
IUUC-Aml-002368	Ailuropoda melanoleuca	36.57	3.00e-110	391.00
IUUC-Atr-003160	Amborella trichopoda	73.53	0.00e+00	971.00
IUUC-Apl-004012	Anas platyrhynchos	38.49	4.00e-109	388.00
IUUC-Aca-004707	Anolis carolinensis	37.01	2.00e-110	392.00
IUUC-Aly-006465	Arabidopsis lyrata	78.18	0.00e+00	994.00
IUUC-Ath-006740	Arabidopsis thaliana	77.39	0.00e+00	990.00
IUUC-Ame-011269	Astyanax mexicanus	44.15	2.00e-45	176.00
IUUC-Bta-013278	Bos taurus	37.22	4.00e-114	404.00
IUUC-Bdi-014659	Brachypodium distachyon	65.71	0.00e+00	881.00
IUUC-Bra-017139	Brassica rapa	77.35	0.00e+00	994.00
IUUC-Cel-018417	Caenorhabditis elegans	32.23	7.00e-86	310.00
IUUC-Cja-019952	Callithrix jacchus	37.64	1.00e-108	386.00
IUUC-Cfa-020225	Canis familiaris	36.69	2.00e-112	399.00
IUUC-Cpo-021900	Cavia porcellus	36.88	2.00e-108	385.00
IUUC-Csa-023028	Chlorocebus sabaeus	37.48	6.00e-109	387.00
IUUC-Cho-025030	Choloepus hoffmanni	38.65	5.00e-64	238.00
IUUC-Cin-025152	Ciona intestinalis	39.53	8.00e-55	206.00
IUUC-Dre-027498	Danio rerio	43.52	3.00e-45	173.00
IUUC-Dno-029383	Dasypus novemcinctus	36.85	1.00e-108	386.00
IUUC-Dor-030633	Dipodomys ordii	36.15	6.00e-99	354.00
IUUC-Dme-031597	Drosophila melanogaster	37.46	3.00e-117	414.00
IUUC-Eca-034306	Equus caballus	36.25	2.00e-107	382.00
IUUC-Fca-036301	Felis catus	37.52	1.00e-113	402.00
IUUC-Fal-037361	Ficedula albicollis	37.72	9.00e-115	406.00
IUUC-Gmo-039238	Gadus morhua	36.98	3.00e-107	381.00
IUUC-Gga-040235	Gallus gallus	38.09	2.00e-108	385.00
IUUC-Gac-042363	Gasterosteus aculeatus	38.33	5.00e-114	404.00
IUUC-Gma-043218	Glycine max	79.39	0.00e+00	1051.00
IUUC-Ggo-044632	Gorilla gorilla	36.46	8.00e-106	377.00
IUUC-Hsa-045792	Homo sapiens	37.48	2.00e-113	402.00
IUUC-Hvu-047517	Hordeum vulgare	67.62	0.00e+00	923.00
IUUC-Itr-048076	Ictidomys tridecemlineatus	36.88	5.00e-112	397.00
IUUC-Lch-050428	Latimeria chalumnae	37.64	1.00e-115	409.00
IUUC-Lpe-051306	Leersia perrieri	68.89	0.00e+00	934.00
IUUC-Loc-052096	Lepisosteus oculatus	34.77	3.00e-91	328.00
IUUC-Laf-054060	Loxodonta africana	36.71	6.00e-107	380.00
IUUC-Mcc-055619	Macaca mulatta	36.65	8.00e-105	373.00
IUUC-Meu-056689	Macropus eugenii	38.15	2.00e-68	252.00
IUUC-Mtr-057922	Medicago truncatula	79.07	0.00e+00	1039.00
IUUC-Mga-060150	Meleagris gallopavo	38.17	3.00e-108	384.00
IUUC-Mmr-061226	Microcebus murinus	36.75	6.00e-107	380.00
IUUC-Mdo-062674	Monodelphis domestica	37.17	2.00e-115	409.00
IUUC-Mmu-064170	Mus musculus	36.73	8.00e-109	387.00
IUUC-Mac-065124	Musa acuminata	73.77	0.00e+00	989.00
IUUC-Mpu-066001	Mustela putorius furo	36.45	5.00e-108	384.00
IUUC-Mlu-067253	Myotis lucifugus	36.41	6.00e-107	380.00
IUUC-Nle-070115	Nomascus leucogenys	35.63	1.00e-97	349.00
IUUC-Opr-070254	Ochotona princeps	36.72	2.00e-104	372.00
IUUC-Ont-071666	Oreochromis niloticus	38.30	8.00e-111	393.00
IUUC-Oan-073292	Ornithorhynchus anatinus	43.17	2.00e-33	134.00
IUUC-Ocu-074824	Oryctolagus cuniculus	35.65	6.00e-102	363.00
IUUC-Oba-075010	Oryza barthii	68.10	0.00e+00	930.00
IUUC-Obr-076364	Oryza brachyantha	68.57	0.00e+00	929.00
IUUC-Ogl-077019	Oryza glaberrima	68.10	0.00e+00	930.00
IUUC-Ogu-078496	Oryza glumaepatula	68.10	0.00e+00	930.00
IUUC-Oin-080116	Oryza indica	67.94	0.00e+00	928.00
IUUC-Olo-080290	Oryza longistaminata	68.10	0.00e+00	931.00
IUUC-Ome-081969	Oryza meridionalis	67.94	0.00e+00	928.00
IUUC-Oni-082075	Oryza nivara	68.10	0.00e+00	930.00
IUUC-Opu-083959	Oryza punctata	68.25	0.00e+00	928.00
IUUC-Oru-084711	Oryza rufipogon	68.10	0.00e+00	930.00
IUUC-Osa-085958	Oryza sativa	67.94	0.00e+00	928.00
IUUC-Ola-086968	Oryzias latipes	37.54	3.00e-114	405.00
IUUC-Oga-089108	Otolemur garnettii	37.03	2.00e-112	398.00
IUUC-Oar-089986	Ovis aries	34.59	2.00e-99	355.00
IUUC-Ptr-091281	Pan troglodytes	37.36	1.00e-112	399.00
IUUC-Pan-092585	Papio anubis	37.48	6.00e-109	387.00
IUUC-Pma-094396	Petromyzon marinus	35.50	4.00e-108	384.00
IUUC-Pfo-096973	Poecilia formosa	38.05	6.00e-121	427.00
IUUC-Pab-098391	Pongo abelii	37.01	1.00e-108	386.00
IUUC-Pop-098850	Populus trichocarpa	82.83	0.00e+00	1094.00
IUUC-Pca-100257	Procavia capensis	55.00	8.00e-24	104.00
IUUC-Ppe-101578	Prunus persica	81.72	0.00e+00	1075.00
IUUC-Pva-102872	Pteropus vampyrus	35.85	4.00e-107	381.00
IUUC-Rno-105737	Rattus norvegicus	36.69	4.00e-113	400.00
IUUC-Sha-107084	Sarcophilus harrisii	35.65	8.00e-90	323.00
IUUC-Sja-107688	Schizosaccharomyces japonicus	32.53	4.00e-92	331.00
IUUC-Spo-108309	Schizosaccharomyces pombe	34.44	3.00e-86	311.00
IUUC-Smo-109255	Selaginella moellendorffii	52.31	0.00e+00	656.00
IUUC-Sit-109962	Setaria italica	68.89	0.00e+00	937.00
IUUC-Sly-110897	Solanum lycopersicum	77.42	0.00e+00	1026.00
IUUC-Stu-111971	Solanum tuberosum	78.38	0.00e+00	1039.00
IUUC-Sar-113415	Sorex araneus	49.63	1.00e-32	133.00
IUUC-Sbi-114857	Sorghum bicolor	67.94	0.00e+00	922.00
IUUC-Tgu-117256	Taeniopygia guttata	37.85	1.00e-114	406.00
IUUC-Tru-117871	Takifugu rubripes	37.74	1.00e-113	403.00
IUUC-Tsy-119172	Tarsius syrichta	44.49	5.00e-59	221.00
IUUC-Tni-120339	Tetraodon nigroviridis	36.97	1.00e-115	409.00
IUUC-Tae-123530	Triticum aestivum	67.62	0.00e+00	920.00
IUUC-Tur-126845	Triticum urartu	62.46	0.00e+00	738.00
IUUC-Tbe-127526	Tupaia belangeri	35.28	2.00e-107	382.00
IUUC-Ttr-128898	Tursiops truncatus	34.33	6.00e-97	347.00
IUUC-Vvi-131217	Vitis vinifera	83.62	0.00e+00	1077.00
IUUC-Xtr-132860	Xenopus tropicalis	34.48	1.00e-94	340.00
IUUC-Xma-133830	Xiphophorus maculatus	38.05	2.00e-121	428.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence