iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mga-059262

Ensembl Protein ID

ENSMGAP00000016735.1

UniProt Accession

G1NRN5; G1NRN5_MELGA

Protein Name

Uncharacterized protein

Gene Name

RAG1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSMGAG00000015794.1	ENSMGAT00000017709.1	ENSMGAP00000016735.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	76.62	0.00e+00	1636.00	IUUC-Hsa-045964
E3 activity/RING/RING	75.02	0.00e+00	1615.00	IUUC-Mmu-064297

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Meleagris gallopavo

Protein Sequence
(Fasta)

MSITSQMDLP EEIQHPYAKF SEWKFKLFKV RPFQKAPSDK SQCINKDQEQ EVASTDQNIT 60
LHKDEEVPRG EKLILTQMDF MGNTQALEKN VNDMKIQDNT VHQNNLKQLC RICGASFKTD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCAATAA CATCACAAAT GGACCTACCC GAAGAGATTC AGCATCCATA TGCAAAATTT 60
TCTGAATGGA AATTCAAGCT GTTTAAAGTG AGACCATTTC AAAAAGCACC TTCTGATAAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0233--DNA recombination
KW-0238--DNA-binding
KW-0479--Metal-binding
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR024627--RAG1
IPR019485--RAG1_Znf
IPR023336--RAG_nonamer-bd_dom
IPR013087--Znf_C2H2_type
IPR018957--Znf_C3HC4_RING-type
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS51487--NBD
PS51765--ZF_RAG1
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF12940--RAG1
PF00097--zf-C3HC4
PF10426--zf-RAG1

SMART

SM00184--RING

Gene Ontology

GO:0005634--C:nucleus
GO:0004519--F:endonuclease activity
GO:0043565--F:sequence-specific DNA binding
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0002250--P:adaptive immune response
GO:0010390--P:histone monoubiquitination
GO:0043154--P:negative regulation of cysteine-type endopeptidase activity involved in apoptotic process
GO:0070244--P:negative regulation of thymocyte apoptotic process
GO:0045582--P:positive regulation of T cell differentiation
GO:0002331--P:pre-B cell allelic exclusion
GO:0051865--P:protein autoubiquitination
GO:0033077--P:T cell differentiation in thymus
GO:0043029--P:T cell homeostasis
GO:0048538--P:thymus development
GO:0033151--P:V(D)J recombination

KEGG

mgp:100542632

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001206	Ailuropoda melanoleuca	76.19	0.00e+00	1639.00
IUUC-Apl-003271	Anas platyrhynchos	92.23	0.00e+00	2019.00
IUUC-Aca-004400	Anolis carolinensis	76.60	0.00e+00	1674.00
IUUC-Ame-011295	Astyanax mexicanus	59.12	0.00e+00	1221.00
IUUC-Bta-012421	Bos taurus	77.10	0.00e+00	1647.00
IUUC-Cja-019891	Callithrix jacchus	75.46	0.00e+00	1602.00
IUUC-Cfa-020740	Canis familiaris	70.52	0.00e+00	1532.00
IUUC-Cpo-021800	Cavia porcellus	75.58	0.00e+00	1566.00
IUUC-Csa-024203	Chlorocebus sabaeus	75.13	0.00e+00	1422.00
IUUC-Dre-028416	Danio rerio	59.26	0.00e+00	1219.00
IUUC-Dno-029101	Dasypus novemcinctus	76.02	0.00e+00	1612.00
IUUC-Eca-033385	Equus caballus	76.50	0.00e+00	1641.00
IUUC-Fca-036545	Felis catus	76.14	0.00e+00	1620.00
IUUC-Fal-037208	Ficedula albicollis	87.91	0.00e+00	1928.00
IUUC-Gmo-039622	Gadus morhua	53.84	0.00e+00	1149.00
IUUC-Gga-041182	Gallus gallus	97.41	0.00e+00	2062.00
IUUC-Gac-041682	Gasterosteus aculeatus	57.17	0.00e+00	1195.00
IUUC-Ggo-044510	Gorilla gorilla	76.52	0.00e+00	1625.00
IUUC-Hsa-045964	Homo sapiens	76.52	0.00e+00	1627.00
IUUC-Itr-048862	Ictidomys tridecemlineatus	76.52	0.00e+00	1620.00
IUUC-Lch-050041	Latimeria chalumnae	68.16	0.00e+00	1450.00
IUUC-Loc-052464	Lepisosteus oculatus	64.60	0.00e+00	1366.00
IUUC-Laf-053544	Loxodonta africana	76.62	0.00e+00	1627.00
IUUC-Mcc-054867	Macaca mulatta	76.33	0.00e+00	1617.00
IUUC-Meu-055986	Macropus eugenii	74.89	0.00e+00	1471.00
IUUC-Mdo-062686	Monodelphis domestica	75.10	0.00e+00	1644.00
IUUC-Mmu-064297	Mus musculus	75.02	0.00e+00	1640.00
IUUC-Mpu-066027	Mustela putorius furo	75.53	0.00e+00	1609.00
IUUC-Mlu-067885	Myotis lucifugus	77.00	0.00e+00	1635.00
IUUC-Nle-070073	Nomascus leucogenys	76.33	0.00e+00	1621.00
IUUC-Ont-071400	Oreochromis niloticus	59.42	0.00e+00	1257.00
IUUC-Oan-072920	Ornithorhynchus anatinus	91.07	0.00e+00	756.00
IUUC-Ocu-074616	Oryctolagus cuniculus	75.87	0.00e+00	1601.00
IUUC-Ola-086828	Oryzias latipes	58.90	0.00e+00	1242.00
IUUC-Oga-088675	Otolemur garnettii	88.19	2.00e-147	513.00
IUUC-Oar-090380	Ovis aries	76.35	0.00e+00	1661.00
IUUC-Ptr-090648	Pan troglodytes	76.43	0.00e+00	1623.00
IUUC-Pan-092036	Papio anubis	76.23	0.00e+00	1615.00
IUUC-Psi-093130	Pelodiscus sinensis	83.56	0.00e+00	1843.00
IUUC-Pfo-097273	Poecilia formosa	59.77	0.00e+00	1234.00
IUUC-Pca-100134	Procavia capensis	71.62	0.00e+00	1505.00
IUUC-Rno-105632	Rattus norvegicus	75.34	0.00e+00	1640.00
IUUC-Sha-107238	Sarcophilus harrisii	74.88	0.00e+00	1641.00
IUUC-Sar-113591	Sorex araneus	66.47	0.00e+00	1403.00
IUUC-Ssc-115720	Sus scrofa	76.71	0.00e+00	1633.00
IUUC-Tgu-117030	Taeniopygia guttata	88.62	0.00e+00	1927.00
IUUC-Tru-117669	Takifugu rubripes	57.73	0.00e+00	1137.00
IUUC-Tsy-119578	Tarsius syrichta	73.65	0.00e+00	1577.00
IUUC-Tni-120073	Tetraodon nigroviridis	56.93	0.00e+00	1191.00
IUUC-Tbe-128029	Tupaia belangeri	64.98	0.00e+00	746.00
IUUC-Ttr-128677	Tursiops truncatus	84.82	0.00e+00	738.00
IUUC-Vpa-130346	Vicugna pacos	87.81	0.00e+00	834.00
IUUC-Xtr-132442	Xenopus tropicalis	87.63	9.00e-101	358.00
IUUC-Xma-133595	Xiphophorus maculatus	61.08	0.00e+00	1242.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence