iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Vvi-131361

UUCD1 version

UUC-ViV-00478

Ensembl Protein ID

VIT_00s0455g00020.t01

UniProt Accession

F6GZB1; F6GZB1_VITVI

Genbank Protein ID

CCB45297.1

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

FN595005

Gene Name

VIT_00s0455g00020

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VIT_00s0455g00020	VIT_00s0455g00020.t01	VIT_00s0455g00020.t01

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.10e-11	45.0	345	377

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtcl...af.sdtllvsGsdDgtikvWDlr 31
           H ++vt l   ++ + t+l+s+s Dgt+k+W+ r
   Q: 345  HDGEVTELsmcQWmT-TRLASASTDGTVKIWEDR 377
           777777752225655.99*************855 PP

Organism

Vitis vinifera

Protein Sequence
(Fasta)

MANQAGGPSD LHKLFKPSSN PGPATIIQPS PSSPSPNLQP YATPSPSSSS SSYPPPTGPL 60
PFHTHYLPYQ PQPQPLPISY QTSQQQPHLP SPSPNSGARL MALLTTPSNP PMPFPATAPP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTATTATTCT ATAGATGTTG GAACTTGGGT GTGTATATAT ATTCCTTCTA TTTTTCTCTC 60
TCTGACTCTC TCACCTCCAG CTGCGTTTTG GGACTTATCT CTGTAGCCGT CTTTGTATCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR032401--EDC4_WD40
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF16529--Ge1_WD40

SMART

SM00320--WD40

Gene Ontology

GO:0000932--C:P-body
GO:0031087--P:deadenylation-independent decapping of nuclear-transcribed mRNA

KEGG

vvi:100241190

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000781	Aegilops tauschii	51.92	0.00e+00	1175.00
IUUC-Atr-002815	Amborella trichopoda	53.86	0.00e+00	1278.00
IUUC-Gma-044019	Glycine max	63.73	0.00e+00	1474.00
IUUC-Hvu-047656	Hordeum vulgare	51.67	0.00e+00	1193.00
IUUC-Lpe-051585	Leersia perrieri	53.69	0.00e+00	1117.00
IUUC-Loc-051778	Lepisosteus oculatus	24.74	1.00e-22	101.00
IUUC-Mac-065564	Musa acuminata	69.38	0.00e+00	717.00
IUUC-Oan-072701	Ornithorhynchus anatinus	26.14	2.00e-07	49.70
IUUC-Oin-079723	Oryza indica	74.08	0.00e+00	650.00
IUUC-Ppa-095912	Physcomitrella patens	57.84	9.00e-135	474.00
IUUC-Pop-100004	Populus trichocarpa	71.07	0.00e+00	1621.00
IUUC-Pca-100720	Procavia capensis	26.64	4.00e-06	46.20
IUUC-Sit-110226	Setaria italica	73.37	0.00e+00	654.00
IUUC-Sbi-114653	Sorghum bicolor	54.24	0.00e+00	1197.00
IUUC-Tca-121627	Theobroma cacao	71.65	0.00e+00	1635.00
IUUC-Tae-125636	Triticum aestivum	52.13	0.00e+00	1199.00
IUUC-Tur-126244	Triticum urartu	47.85	0.00e+00	1043.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence