iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017911

Ensembl Protein ID

Bra027514.1-P

UniProt Accession

M4EFF2; M4EFF2_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra027514	Bra027514.1	Bra027514.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.60e-40	136.3	483	514
UBD/Beta-Prp	3.00e-68	231.2	355	524

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sd.tllvsGsdDgtikvWD 29
           gH+  v+c+++   + ++l+s+sdD ti++W 
   Q: 483  GHSMTVNCVSWnpRNpRMLASASDDQTIRIWG 514
           79999*******95569**************7 PP

UBD/Beta-Prp

   S: 8    hhksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdls.tgkcvhtlkghedsvlslsf 102
           +++  + +++++pd++ ++t + d+ i++ ++++  l++++   e+++t+++ s dgk+++   + + i++wdl    k+  +++gh +s + +++
   Q: 355  TRIPKVVDLAVTPDGESMITVFSDKEIRILNLES--LVERVVTEEQAITSLSVSGDGKFFIVNLSSQEIHLWDLAgEWKQPLKFTGHRQSKYVIRS 448
           55556667899***********************..**************************************9778999******999888887 PP
   S: 103  sp...sgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdg.nllvsGslDrtvrlWdlktgkllrtl 175
           +    ++++++sGs+d+ + +w++++++ le +lsgh+ +vncv+++p + ++l+s+s+D+t+r+W     + ++++
   Q: 449  CFgglDSSFIASGSEDSQVYIWNVKNKKPLE-VLSGHSMTVNCVSWNPRNpRMLASASDDQTIRIWGPGKPNRVYEF 524
           7777788************************.**********************************77665555555 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MENNEVLGSK GLLKKHEFVR ILIQCLYSLG YKNSASCLEQ ESNISCKSSD FEFLEKQVLT 60
GDWDSSLAVL DRVFDDSRRD DSRRNTALYL VLKQCLSEYL KRGETSLALS MLQKQAQVFR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAGAATA ATGAGGTTTT AGGGTCAAAA GGTTTGCTCA AGAAACACGA ATTCGTCAGG 60
ATTCTCATCC AGTGCCTGTA CTCATTAGGT TACAAGAACT CCGCTTCTTG TCTTGAACAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR006595--CTLH_C
IPR020472--G-protein_beta_WD-40_rep
IPR006594--LisH
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50897--CTLH
PS50896--LISH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00667--LisH
SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-003020	Amborella trichopoda	54.25	2.00e-154	538.00
IUUC-Aly-005958	Arabidopsis lyrata	84.48	0.00e+00	885.00
IUUC-Ath-006873	Arabidopsis thaliana	84.87	0.00e+00	884.00
IUUC-Afu-008972	Aspergillus fumigatus	38.90	5.00e-63	234.00
IUUC-Bol-016250	Brassica oleracea	92.47	0.00e+00	1112.00
IUUC-Cfa-020788	Canis familiaris	40.38	2.00e-78	286.00
IUUC-Cho-024572	Choloepus hoffmanni	38.71	2.00e-57	216.00
IUUC-Cin-025474	Ciona intestinalis	41.61	4.00e-54	204.00
IUUC-Cne-026805	Cryptococcus neoformans	28.72	2.00e-32	133.00
IUUC-Dor-030714	Dipodomys ordii	34.59	1.00e-57	217.00
IUUC-Eeu-034468	Erinaceus europaeus	50.41	1.00e-32	134.00
IUUC-Fca-036556	Felis catus	39.44	3.00e-74	272.00
IUUC-Fal-036639	Ficedula albicollis	35.13	1.00e-81	296.00
IUUC-Gmo-039395	Gadus morhua	40.14	3.00e-77	282.00
IUUC-Gma-043704	Glycine max	63.71	0.00e+00	652.00
IUUC-Lch-049848	Latimeria chalumnae	36.88	2.00e-69	256.00
IUUC-Mtr-058724	Medicago truncatula	62.86	0.00e+00	683.00
IUUC-Nle-069654	Nomascus leucogenys	40.38	2.00e-78	286.00
IUUC-Ola-086670	Oryzias latipes	35.23	6.00e-82	298.00
IUUC-Ptr-090787	Pan troglodytes	40.38	2.00e-78	286.00
IUUC-Psi-093579	Pelodiscus sinensis	39.55	2.00e-79	289.00
IUUC-Pma-094254	Petromyzon marinus	42.78	5.00e-81	294.00
IUUC-Pop-098968	Populus trichocarpa	69.45	8.00e-156	542.00
IUUC-Pca-100574	Procavia capensis	43.14	1.00e-43	171.00
IUUC-Ppe-101881	Prunus persica	65.26	0.00e+00	707.00
IUUC-Rno-105335	Rattus norvegicus	40.38	8.00e-79	287.00
IUUC-Stu-112587	Solanum tuberosum	59.45	2.00e-152	531.00
IUUC-Sar-113539	Sorex araneus	44.57	3.00e-40	159.00
IUUC-Tru-118471	Takifugu rubripes	36.19	5.00e-84	305.00
IUUC-Tni-119720	Tetraodon nigroviridis	36.04	1.00e-79	290.00
IUUC-Tvi-122376	Trichoderma virens	36.39	1.00e-51	196.00
IUUC-Tae-124768	Triticum aestivum	55.09	3.00e-170	591.00
IUUC-Ttr-129184	Tursiops truncatus	43.77	6.00e-75	274.00
IUUC-Vpa-130400	Vicugna pacos	40.38	2.00e-77	282.00
IUUC-Vvi-131027	Vitis vinifera	63.98	0.00e+00	702.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence