iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mtr-057812

Ensembl Protein ID

KEH23016

UniProt Accession

A0A072U0R3; A0A072U0R3_MEDTR

Genbank Protein ID

KEH23016.1

Protein Name

Splicing factor 3A, protein

Genbank Nucleotide ID

CM001223

Gene Name

MTR_7g063860

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MTR_7g063860	KEH23016	KEH23016

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UDP/UBQ/UBQ_Other	7.30e-08	33.6	355	422

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UBQ/UBQ_Other

   S: 8    ldgseltlkv.npsdtVaeLKekiekklgippeqqrLiykGkiLeddktLadyglkdgstihllekks 74
           l+g++l++ v + s+tV+ LKeki ++  +p+++q+L  k   L+d+ +La+y++  g  + l ++++
   Q: 355  LKGKVLEITVqSLSETVGSLKEKIAGENQLPANKQKLSGKPGFLKDNMSLAYYNVSGGEILSLALRER 422
           688999999857777***********************99999************8887777777666 PP

Organism

Medicago truncatula

Protein Sequence
(Fasta)

MEEDSAEPGN EVEMEMDEEE GMRAASLEDN DEGKKSEVRV TEDPEPPIRI VKKWKRPEDM 60
LPADRDSTKF VVSPITGELI PISEMMFSKI RETTLAQDDE ISKNIVGLAR TRPDIFGTTE 120

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Nucleotide Sequence
(Fasta)

ATGGAAGAAG ATTCTGCTGA GCCAGGGAAT GAAGTAGAAA TGGAAATGGA CGAGGAAGAG 60
GGAATGAGAG CTGCTAGTTT GGAAGACAAT GATGAAGGGA AGAAGAGTGA AGTCAGGGTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR029071--Ubiquitin-rel_dom
IPR000626--Ubiquitin_dom

PROSITE

PS50053--UBIQUITIN_2

Pfam

PF00240--ubiquitin

SMART

SM00213--UBQ

KEGG

mtr:MTR_7g063860

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Pma-094314	Petromyzon marinus	50.88	5.00e-11	58.20

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence