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Basic Information Integrated Annotations
Tag Content
UUCD2 ID IUUC-Spo-108294
UUCD1 version UUC-ScP-00229
Ensembl Protein ID SPBC577.09.1:pep
UniProt Accession Q9USR0; CKN1_SCHPO
Genbank Protein ID CAB54817.1
Protein Name DNA excision repair protein ckn1
Genbank Nucleotide ID CU329671
Gene Name ckn1; SPBC577.09
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
SPBC577.09 SPBC577.09.1 SPBC577.09.1:pep
Annotation
mRNA Expression
GEO
Protein-protein Interaction
Mentha
Protein Expression/Proteomics
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 1.10e-34 115.1 187 220
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD
   S: 1    gHtdsvtclaf...sdtllvsGsdDgtikvWDlr 31
           gHt+ v ++++   ++  l+sGs Dgt+++WD+r
   Q: 187  GHTGNVLAVDWcpkNEFVLASGSADGTCRLWDIR 220
           8***********6443558*************86 PP
   
Organism Schizosaccharomyces pombe
Functional Description
(View)

Functional Description


     Adapter protein for ddb1/cullin 4 ubiquitin ligases involved in transcription-coupled nucleotide excision repair.
 Adapter protein for ddb1/cullin 4 ubiquitin ligases involved in transcription-coupled nucleotide excision repair.
Protein Sequence
(Fasta)
MNSFLLAREW GQEPNSSFRR QLLQHRLQRL ALNPDVKIKR RHGAGILGSV NALSIDNTIH 60
QLMVSGGANS SINVWDLQNI DQKEDEDLIL DTLNAVPART SHKFGITDLH WFPFDNGIFT 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Spo-108294|E3,WD_repeat|Schizosaccharomyces pombe
Please wait for a moment...
Nucleotide Sequence
(Fasta)
CCAACGTCGA AAAACATATT TTTTTATTAT TGTTTCCTGG AAACTACCTT TGAGTTTGCT 60
ATTTAAACAT AGAAGTTGAT TAATTGACAG TATTATTTAC CGCTCATATT AAACTAGCTG 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Spo-108294|E3,WD_repeat|Schizosaccharomyces pombe
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-0227--DNA damage
KW-0234--DNA repair
KW-1185--Reference proteome
KW-0677--Repeat
KW-0833--Ubl conjugation pathway
KW-0853--WD repeat
Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
Pfam

PF00400--WD40
PRINTS

PR00320--GPROTEINBRPT
SMART

SM00320--WD40
Gene Ontology

GO:0005829--C:cytosol
GO:0070912--C:Ddb1-Ckn1 complex
GO:0005634--C:nucleus
GO:0006283--P:transcription-coupled nucleotide-excision repair
KEGG spo:SPBC577.09
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-001170 Aegilops tauschii 36.22 4.00e-17 81.60
IUUC-Aml-002201 Ailuropoda melanoleuca 35.80 3.00e-68 250.00
IUUC-Atr-002784 Amborella trichopoda 35.53 1.00e-35 142.00
IUUC-Apl-003202 Anas platyrhynchos 37.70 1.00e-67 247.00
IUUC-Aca-004708 Anolis carolinensis 38.27 6.00e-65 238.00
IUUC-Aly-006144 Arabidopsis lyrata 36.84 4.00e-36 143.00
IUUC-Ath-006673 Arabidopsis thaliana 36.68 3.00e-36 144.00
IUUC-Acl-008195 Aspergillus clavatus 28.10 3.00e-39 154.00
IUUC-Afl-008406 Aspergillus flavus 29.62 1.00e-39 155.00
IUUC-Afu-008759 Aspergillus fumigatus 29.47 9.00e-37 145.00
IUUC-Ani-009380 Aspergillus nidulans 28.61 4.00e-35 140.00
IUUC-Ang-009820 Aspergillus niger 31.30 2.00e-36 144.00
IUUC-Aor-010092 Aspergillus oryzae 28.42 9.00e-43 166.00
IUUC-Ate-010491 Aspergillus terreus 30.69 2.00e-38 151.00
IUUC-Bta-012825 Bos taurus 35.07 3.00e-67 246.00
IUUC-Bci-013856 Botrytis cinerea 36.86 3.00e-63 233.00
IUUC-Bdi-014899 Brachypodium distachyon 27.06 1.00e-33 135.00
IUUC-Bol-015337 Brassica oleracea 36.32 2.00e-37 147.00
IUUC-Bra-018089 Brassica rapa 36.32 7.00e-38 149.00
IUUC-Cja-018725 Callithrix jacchus 35.07 4.00e-67 246.00
IUUC-Cfa-021162 Canis familiaris 35.80 1.00e-67 248.00
IUUC-Cpo-022190 Cavia porcellus 34.60 3.00e-67 246.00
IUUC-Cre-022960 Chlamydomonas reinhardtii 30.05 5.00e-25 107.00
IUUC-Csa-023610 Chlorocebus sabaeus 34.83 2.00e-67 247.00
IUUC-Cho-024689 Choloepus hoffmanni 33.87 6.00e-60 222.00
IUUC-Cin-025324 Ciona intestinalis 31.52 1.00e-49 188.00
IUUC-Csv-026059 Ciona savignyi 32.22 2.00e-49 187.00
IUUC-Cgl-026384 Colletotrichum gloeosporioides 35.69 1.00e-40 158.00
IUUC-Cme-027182 Cyanidioschyzon merolae 30.46 4.00e-17 81.30
IUUC-Dre-028696 Danio rerio 36.06 9.00e-66 241.00
IUUC-Dno-029102 Dasypus novemcinctus 35.90 8.00e-66 241.00
IUUC-Dor-030361 Dipodomys ordii 31.41 5.00e-52 196.00
IUUC-Dse-031167 Dothistroma septosporum 30.77 1.00e-48 184.00
IUUC-Ete-032856 Echinops telfairi 28.72 2.00e-44 170.00
IUUC-Eca-033611 Equus caballus 35.33 1.00e-59 221.00
IUUC-Eeu-034583 Erinaceus europaeus 45.83 1.00e-23 101.00
IUUC-Fca-036481 Felis catus 35.57 6.00e-68 249.00
IUUC-Fal-037327 Ficedula albicollis 38.85 2.00e-63 234.00
IUUC-Fox-037684 Fusarium oxysporum 32.14 3.00e-46 177.00
IUUC-Fso-038306 Fusarium solani 28.92 4.00e-50 190.00
IUUC-Gmo-039043 Gadus morhua 36.58 6.00e-67 245.00
IUUC-Ggr-039783 Gaeumannomyces graminis 29.00 6.00e-41 159.00
IUUC-Gga-041085 Gallus gallus 37.50 8.00e-67 245.00
IUUC-Gac-042328 Gasterosteus aculeatus 37.34 1.00e-60 224.00
IUUC-Gma-043004 Glycine max 26.57 2.00e-30 124.00
IUUC-Ggo-045627 Gorilla gorilla 34.01 5.00e-58 216.00
IUUC-Hsa-046028 Homo sapiens 34.83 2.00e-67 247.00
IUUC-Hvu-047678 Hordeum vulgare 46.34 3.00e-18 83.60
IUUC-Itr-048648 Ictidomys tridecemlineatus 35.57 7.00e-69 252.00
IUUC-Kpa-049386 Komagataella pastoris 29.29 1.00e-52 198.00
IUUC-Lch-050590 Latimeria chalumnae 36.59 3.00e-58 216.00
IUUC-Lpe-051725 Leersia perrieri 27.67 4.00e-19 87.00
IUUC-Loc-051788 Lepisosteus oculatus 37.40 4.00e-65 239.00
IUUC-Lma-053082 Leptosphaeria maculans 35.61 2.00e-64 237.00
IUUC-Laf-053809 Loxodonta africana 37.06 2.00e-68 250.00
IUUC-Mcc-054998 Macaca mulatta 40.07 4.00e-60 223.00
IUUC-Meu-055929 Macropus eugenii 36.94 2.00e-59 221.00
IUUC-Mor-057003 Magnaporthe oryzae 34.44 3.00e-47 180.00
IUUC-Mtr-057921 Medicago truncatula 26.48 1.00e-29 121.00
IUUC-Mga-059449 Meleagris gallopavo 30.60 1.00e-38 151.00
IUUC-Mmr-061609 Microcebus murinus 34.37 3.00e-57 213.00
IUUC-Mdo-062564 Monodelphis domestica 36.16 9.00e-70 255.00
IUUC-Mmu-063904 Mus musculus 36.94 7.00e-69 252.00
IUUC-Mac-064716 Musa acuminata 37.28 4.00e-35 140.00
IUUC-Mpu-066617 Mustela putorius furo 35.82 4.00e-68 249.00
IUUC-Mlu-067054 Myotis lucifugus 35.15 2.00e-65 241.00
IUUC-Nfi-068467 Neosartorya fischeri 27.41 4.00e-33 133.00
IUUC-Nle-069731 Nomascus leucogenys 34.83 2.00e-67 247.00
IUUC-Ont-072558 Oreochromis niloticus 37.67 6.00e-61 226.00
IUUC-Ocu-074415 Oryctolagus cuniculus 35.64 1.00e-67 248.00
IUUC-Oba-075759 Oryza barthii 37.16 2.00e-34 137.00
IUUC-Obr-076387 Oryza brachyantha 38.25 1.00e-35 141.00
IUUC-Ogu-078186 Oryza glumaepatula 29.12 8.00e-41 159.00
IUUC-Oin-079389 Oryza indica 28.83 2.00e-25 107.00
IUUC-Ome-081471 Oryza meridionalis 37.70 4.00e-33 133.00
IUUC-Oni-082449 Oryza nivara 36.13 2.00e-32 131.00
IUUC-Opu-083210 Oryza punctata 39.34 8.00e-37 145.00
IUUC-Oru-085159 Oryza rufipogon 37.16 3.00e-34 137.00
IUUC-Osa-085926 Oryza sativa 37.75 5.00e-26 108.00
IUUC-Ola-087084 Oryzias latipes 37.93 5.00e-67 246.00
IUUC-Olu-087853 Ostreococcus lucimarinus 30.81 3.00e-22 97.40
IUUC-Oga-089008 Otolemur garnettii 35.90 2.00e-64 237.00
IUUC-Oar-089259 Ovis aries 35.07 2.00e-67 247.00
IUUC-Ptr-091112 Pan troglodytes 34.59 3.00e-66 243.00
IUUC-Psi-093050 Pelodiscus sinensis 36.15 9.00e-67 245.00
IUUC-Pma-094259 Petromyzon marinus 31.68 4.00e-44 169.00
IUUC-Pno-094798 Phaeosphaeria nodorum 31.80 1.00e-59 221.00
IUUC-Ppa-095477 Physcomitrella patens 32.39 1.00e-32 131.00
IUUC-Pfo-096855 Poecilia formosa 36.89 4.00e-68 249.00
IUUC-Pab-098096 Pongo abelii 34.83 5.00e-67 246.00
IUUC-Pop-098800 Populus trichocarpa 28.82 2.00e-45 174.00
IUUC-Pca-100187 Procavia capensis 39.07 1.00e-38 151.00
IUUC-Ppe-101759 Prunus persica 34.14 1.00e-36 145.00
IUUC-Pva-102438 Pteropus vampyrus 42.76 4.00e-33 133.00
IUUC-Pte-104197 Pyrenophora teres 35.80 1.00e-57 214.00
IUUC-Pyt-104421 Pyrenophora triticirepentis 32.33 1.00e-56 212.00
IUUC-Rno-106087 Rattus norvegicus 37.14 4.00e-68 249.00
IUUC-Sce-106276 Saccharomyces cerevisiae 25.26 6.00e-15 73.60
IUUC-Sha-106831 Sarcophilus harrisii 34.68 9.00e-63 231.00
IUUC-Sja-107681 Schizosaccharomyces japonicus 58.37 8.00e-134 468.00
IUUC-Ssl-108613 Sclerotinia sclerotiorum 37.89 3.00e-62 230.00
IUUC-Smo-109008 Selaginella moellendorffii 31.17 2.00e-49 187.00
IUUC-Sit-110300 Setaria italica 36.61 5.00e-33 133.00
IUUC-Sly-111441 Solanum lycopersicum 34.33 8.00e-31 125.00
IUUC-Stu-111995 Solanum tuberosum 34.21 6.00e-31 126.00
IUUC-Sar-113196 Sorex araneus 30.08 9.00e-35 139.00
IUUC-Sbi-113790 Sorghum bicolor 35.08 2.00e-33 135.00
IUUC-Ssc-115609 Sus scrofa 36.55 2.00e-67 247.00
IUUC-Tgu-116927 Taeniopygia guttata 36.91 4.00e-70 256.00
IUUC-Tru-118164 Takifugu rubripes 37.69 6.00e-69 252.00
IUUC-Tsy-119151 Tarsius syrichta 32.59 2.00e-57 214.00
IUUC-Tni-120896 Tetraodon nigroviridis 37.06 3.00e-61 226.00
IUUC-Tca-121592 Theobroma cacao 35.09 1.00e-35 142.00
IUUC-Tre-122023 Trichoderma reesei 31.73 3.00e-56 210.00
IUUC-Tvi-122507 Trichoderma virens 30.22 3.00e-53 201.00
IUUC-Tae-125276 Triticum aestivum 37.50 1.00e-34 139.00
IUUC-Tur-126092 Triticum urartu 35.29 3.00e-16 77.40
IUUC-Tbe-127422 Tupaia belangeri 39.10 1.00e-25 108.00
IUUC-Ttr-129097 Tursiops truncatus 34.85 3.00e-66 243.00
IUUC-Vda-130014 Verticillium dahliae 37.97 5.00e-47 179.00
IUUC-Vpa-130782 Vicugna pacos 36.29 3.00e-66 243.00
IUUC-Vvi-131494 Vitis vinifera 34.65 6.00e-35 139.00
IUUC-Xtr-132165 Xenopus tropicalis 35.73 2.00e-65 240.00
IUUC-Xma-133205 Xiphophorus maculatus 37.71 3.00e-71 259.00
IUUC-Yli-134614 Yarrowia lipolytica 31.19 3.00e-63 233.00
IUUC-Zma-135861 Zea mays 37.17 2.00e-34 138.00
Created Date 25-Jun-2017

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